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Automating candidate gene prioritization with large language models: from naive scoring to literature-grounded validation 使用大型语言模型自动化候选基因优先排序：从简单评分到文献支持的验证 Khan, Taushif; Toufiq, Mohammed; Yurieva, Marina; Indrawattana, Nitaya; Jittmittraphap, Akanitt; Kosoltanapiwat, Nathamon; Pumirat, Pornpan; Sukphopetch, Passanesh; Vanaporn, Muthita; Palucka, Karolina; Kabeer, Basirudeen Syed Ahamed; Rinchai, Darawan; Chaussabel, Damien 分享 收藏
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A data browsing application for accessing gene and module-level blood transcriptome profiles of healthy pregnant women from high- and low-resource settings Rinchai, Darawan; Brummaier, Tobias; Marr, Alexandra; Habib, Tanwir; Toufiq, Mohammed; Kino, Tomoshigue; Nosten, Francois; Al Khodor, Souhaila; Terranegra, Annalisa; Mcgready, Rose; Kabeer, Basirudeen Syed Ahamed; Chaussabel, Damien 分享 收藏
Design of a targeted blood transcriptional panel for monitoring immunological changes accompanying pregnancy Brummaier, Tobias; Rinchai, Darawan; Toufiq, Mohammed; Karim, Mohammed Y.; Habib, Tanwir; Utzinger, Jurg; Paris, Daniel H.; McGready, Rose; Marr, Alexandra K.; Kino, Tomoshige; Terranegra, Annalisa; Al Khodor, Souhaila; Chaussabel, Damien; Kabeer, Basirudeen Syed Ahamed 分享 收藏
Distinct baseline immune characteristics associated with responses to conjugated and unconjugated pneumococcal polysaccharide vaccines in older adults 与老年人对结合和非结合肺炎球菌多糖疫苗的反应相关的不同基线免疫特征 Ravichandran, Sathyabaarathi; Erra-Diaz, Fernando; Karakaslar, Onur E.; Marches, Radu; Kenyon-Pesce, Lisa; Rossi, Robert; Chaussabel, Damien; Nehar-Belaid, Djamel; Lafon, David C.; Pascual, Virginia; Palucka, Karolina; Paust, Silke; Nahm, Moon H.; Kuchel, George A.; Banchereau, Jacques; Ucar, Duygu 分享 收藏
Unveiling the dynamics of the breast milk microbiome: impact of lactation stage and gestational age 揭示母乳微生物组的动态: 哺乳期和胎龄的影响 Singh, Parul; Al Mohannadi, Noora; Murugesan, Selvasankar; Almarzooqi, Fajr; Kabeer, Basirudeen Syed Ahamed; Marr, Alexandra Katharina; Kino, Tomoshige; Brummaier, Tobias; Terranegra, Annalisa; McGready, Rose; Nosten, Francois; Chaussabel, Damien; Al Khodor, Souhaila 分享 收藏
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Harnessing large language models (LLMs) for candidate gene prioritization and selection 利用大型语言模型 (llm) 进行候选基因优先排序和选择 Toufiq, Mohammed; Rinchai, Darawan; Bettacchioli, Eleonore; Kabeer, Basirudeen Syed Ahamed; Khan, Taushif; Subba, Bishesh; White, Olivia; Yurieva, Marina; George, Joshy; Jourde-Chiche, Noemie; Chiche, Laurent; Palucka, Karolina; Chaussabel, Damien 分享 收藏
Multiomic Biological mOdifications in the immune response of patients treated with chemotherapy, anti-CD20, or immune-checkpoint inhibitors and receiving a Third dose of vaccinE against SARS-CoV-2 (the BO0STER study) Zoppoli, G.; Ferrando, L.; Ravera, F.; Dameri, M.; Lombardo, I.; Stabile, M.; Fallani, N.; Cigolini, B.; Gentilcore, G.; Bruzzone, B.; Domnich, A.; Orsi, A.; Ballerini, F.; Rinchai, D.; Chaussabel, D.; Bedognetti, D.; Grivel, J-C.; Genova, C.; Lemoli, R.; Ballestrero, A. 分享 收藏
Association of Juvenile Dermatomyositis Disease Activity With the Expansion of Blood Memory B and T Cell Subsets Lacking Follicular Markers Gofshteyn, Jacqueline S.; Mansfield, Leanne; Spitznagle, Jacob; Balasubramanian, Preetha; Cardenas, Jacob; Miller, Thomas; Gu, Jinghua; Wang, Xuan; Punaro, Marilynn; Fuller, Julie; Nassi, Lorien; Stewart, Katie; Ohouo, Marina; Stagnar, Cristy; Baisch, Jeanine; Walters, Lynnette; Wang, Yuanyuan; Yan, Helena; Rinchai, Darawan; Chaussabel, Damien; Caielli, Simone; Hong, Seunghee; Onel, Karen; Wright, Tracey; Pascual, Virginia 分享 收藏
Abundance of ACVR1B transcript is elevated during septic conditions: Perspectives obtained from a hands-on reductionist investigation Preechanukul, Anucha; Yimthin, Thatcha; Tandhavanant, Sarunporn; Brummaier, Tobias; Chomkatekaew, Chalita; Das, Sukanta; Kabeer, Basirudeen Syed Ahamed; Toufiq, Mohammed; Rinchai, Darawan; West, T. Eoin; Chaussabel, Damien; Chantratita, Narisara; Garand, Mathieu 分享 收藏
High-temporal resolution profiling reveals distinct immune trajectories following the first and second doses of COVID-19 mRNA vaccines Rinchai, Darawan; Deola, Sara; Zoppoli, Gabriele; Kabeer, Basirudeen Syed Ahamed; Taleb, Sara; Pavlovski, Igor; Maacha, Selma; Gentilcore, Giusy; Toufiq, Mohammed; Mathew, Lisa; Liu, Li; Vempalli, Fazulur Rehaman; Mubarak, Ghada; Lorenz, Stephan; Sivieri, Irene; Cirmena, Gabriella; Dentone, Chiara; Cuccarolo, Paola; Giacobbe, Daniele Roberto; Baldi, Federico; Garbarino, Alberto; Cigolini, Benedetta; Cremonesi, Paolo; Bedognetti, Michele; Ballestrero, Alberto; Bassetti, Matteo; Hejblum, Boris P.; Augustine, Tracy; Van Panhuys, Nicholas; Thiebaut, Rodolphe; Branco, Ricardo; Chew, Tracey; Shojaei, Maryam; Short, Kirsty; Feng, Carl G.; Zughaier, Susu M.; De Maria, Andrea; Tang, Benjamin; Hssain, Ali Ait; Bedognetti, Davide; Grivel, Jean-Charles; Chaussabel, Damien 分享 收藏
Understanding the Role of GLUT2 in Dysglycemia Associated with Fanconi-Bickel Syndrome 了解GLUT2在fanconi-bickel综合征相关血糖异常中的作用 Sharari, Sanaa; Kabeer, Basirudeen; Mohammed, Idris; Haris, Basma; Pavlovski, Igor; Hawari, Iman; Bhat, Ajaz Ahmad; Toufiq, Mohammed; Tomei, Sara; Mathew, Rebecca; Syed, Najeeb; Nisar, Sabah; Maacha, Selma; Grivel, Jean-Charles; Chaussabel, Damien; Ericsson, Johan; Hussain, Khalid 分享 收藏
At-home blood collection and stabilization in high temperature climates using homeRNA Brown, Lauren G.; Haack, Amanda J.; Kennedy, Dakota S.; Adams, Karen N.; Stolarczuk, Jennifer E.; Takezawa, Meg G.; Berthier, Erwin; Thongpang, Sanitta; Lim, Fang Yun; Chaussabel, Damien; Garand, Mathieu; Theberge, Ashleigh B. 分享 收藏
Presymptomatic diagnosis of postoperative infection and sepsis using gene expression signatures Lukaszewski, Roman A.; Jones, Helen E.; Gersuk, Vivian H.; Russell, Paul; Simpson, Andrew; Brealey, David; Walker, Jonathan; Thomas, Matt; Whitehouse, Tony; Ostermann, Marlies; Koch, Alexander; Zacharowski, Kai; Kruhoffer, Mogens; Chaussabel, Damien; Singer, Mervyn 分享 收藏
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