K. Eric Wommack - Publications, H-index & Citations

K. Eric Wommack

university of delaware

52H指数

122论文数

1.2W被引数

收录论文 60

发表时间

Extending protein language models to a viral genomic scale using biologically induced sparse attention 利用生物诱导的稀疏注意力机制扩展蛋白质语言模型至病毒基因组规模

GigaScience

IF3.9

2026-07-21

OAAI

Thibaut Dejean; Barbra D Ferrell; William Harrigan; Zachary D Schreiber; Rajan Sawhney; K Eric Wommack; Shawn W Polson; Mahdi Belcaid

Comparative Analysis Reveals Host Species-Dependent Diversity Among 16 Virulent Bacteriophages Isolated Against Soybean Bradyrhizobium spp.比较分析显示，在针对大豆慢生根瘤菌Bradyrhizobium spp.分离的16种致病性噬菌体之间存在宿主物种依赖性多样性。

Viruses

IF3.5

2026-03-03

OAAI

Emily A. Morgese; Barbra D. Ferrell; Spencer C. Toth; Shawn W. Polson; K. Eric Wommack; Jeffry J. Fuhrmann

Fine-tuning protein language models unlocks the potential of underrepresented viral proteomes Sawhney, R.; Ferrell, B.D.; Dejean, T.; Schreiber, Z.; Harrigan, W.; Polson, S.W.; Wommack, K.E.; Belcaid, M. 微调蛋白质语言模型释放了未充分代表病毒蛋白组的潜力。PeerJ 2025, 13, e19919. [Google Scholar] [CrossRef]

PEERJ

IF2.4

2025-09-18

OAAI

Sawhney, Rajan; Ferrell, Barbra D.; Dejean, Thibaut; Schreiber, Zachary; Harrigan, William; Polson, Shawn W.; Wommack, K. Eric; Belcaid, Mahdi

Soybean Bradyrhizobium spp. Spontaneously Produce Abundant and Diverse Temperate Phages in Culture

VIRUSES-BASEL

IF3.5

2024-11-07

OAAI

Richards, Vanessa A.; Ferrell, Barbra D.; Polson, Shawn W.; Wommack, K. Eric; Fuhrmann, Jeffry J.

Ubiquitous, B12-dependent virioplankton utilizing ribonucleotide-triphosphate reductase demonstrate interseasonal dynamics and associate with a diverse range of bacterial hosts in the pelagic ocean

ISME COMMUNICATIONS

IF6.1

2023-10-03

OAAI

Wu, Ling-Yi; Piedade, Goncalo J.; Moore, Ryan M.; Harrison, Amelia O.; Martins, Ana M.; Bidle, Kay D.; Polson, Shawn W.; Sakowski, Eric G.; Nissimov, Jozef I.; Dums, Jacob T.; Ferrell, Barbra D.; Wommack, K. Eric

Spontaneously Produced Lysogenic Phages Are an Important Component of the Soybean Bradyrhizobium Mobilome

MBIO

IF4.7

2023-04-25

OAAI

Joglekar, Prasanna; Ferrell, Barbra D.; Jarvis, Tessa; Haramoto, Kona; Place, Nicole; Dums, Jacob T.; Polson, Shawn W.; Wommack, K. Eric; Fuhrmann, Jeffry J.

Coordination of SARS-CoV-2 wastewater and clinical testing of university students demonstrates the importance of sampling duration and collection time

SCIENCE OF THE TOTAL ENVIRONMENT

IF8

2022-07-01

OAAI

Anderson-Coughlin, Brienna L.; Shearer, Adrienne E. H.; Omar, Alexis N.; Litt, Pushpinder K.; Bernberg, Erin; Murphy, Marcella; Anderson, Amy; Sauble, Lauren; Ames, Bri; Damminger, Oscar, Jr.; Ladman, Brian S.; Dowling, Timothy F.; Wommack, K. Eric; Kniel, Kalmia E.

Novel Viral DNA Polymerases From Metagenomes Suggest Genomic Sources of Strand-Displacing Biochemical Phenotypes

FRONTIERS IN MICROBIOLOGY

IF4.5

2022-04-21

OAAI

Keown, Rachel A.; Dums, Jacob T.; Brumm, Phillip J.; MacDonald, Joyanne; Mead, David A.; Ferrell, Barbra D.; Moore, Ryan M.; Harrison, Amelia O.; Polson, Shawn W.; Wommack, K. Eric

Towards an integrative view of virus phenotypes 走向病毒表型的综合观点

NATURE REVIEWS MICROBIOLOGY

IF103.3

2021-09-14

OAAI

DeLong, John P.; Al-Sammak, Maitham A.; Al-Ameeli, Zeina T.; Dunigan, David D.; Edwards, Kyle F.; Fuhrmann, Jeffry J.; Gleghorn, Jason P.; Li, Hanqun; Haramoto, Kona; Harrison, Amelia O.; Marston, Marcia F.; Moore, Ryan M.; Polson, Shawn W.; Ferrell, Barbra D.; Salsbery, Miranda E.; Schvarcz, Christopher R.; Shirazi, Jasmine; Steward, Grieg F.; Van Etten, James L.; Wommack, K. Eric

Assessing the efficacy of eDNA metabarcoding for measuring microbial biodiversity within forest ecosystems

SCIENTIFIC REPORTS

IF3.9

2021-01-15

OAAI

Ladin, Zachary S.; Ferrell, Barbra; Dums, Jacob T.; Moore, Ryan M.; Levia, Delphis F.; Shriver, W. Gregory; D'Amico, Vincent; Trammell, Tara L. E.; Setubal, Joao Carlos; Wommack, K. Eric

Temporal Dynamics of Soil Virus and Bacterial Populations in Agricultural and Early Plant Successional Soils

FRONTIERS IN MICROBIOLOGY

IF4.5

2020-07-07

OAAI

Roy, Krishnakali; Ghosh, Dhritiman; DeBruyn, Jennifer M.; Dasgupta, Tirthankar; Wommack, K. Eric; Liang, Xiaolong; Wagner, Regan E.; Radosevich, Mark

Lysogenic reproductive strategies of viral communities vary with soil depth and are correlated with bacterial diversity

SOIL BIOLOGY & BIOCHEMISTRY

IF10.3

2020-05-01

PREAI

Liang, Xiaolong; Zhang, Yingyue; Wommack, K. Eric; Wilhelm, Steven W.; DeBruyn, Jennifer M.; Sherfy, Andrew C.; Zhuang, Jie; Radosevich, Mark

Polyphasic analysis reveals correlation between phenotypic and genotypic analysis in soybean bradyrhizobia (Bradyrhizobium spp.)

SYSTEMATIC AND APPLIED MICROBIOLOGY

IF4.2

2020-05-01

OAAI

Joglekar, P.; Mesa, C. P.; Richards, V. A.; Polson, S. W.; Wommack, K. E.; Fuhrmann, J. J.

CRISPR Spacers Indicate Preferential Matching of Specific Virioplankton Genes

MBIO

IF4.7

2019-04-30

OAAI

Nasko, Daniel J.; Ferrell, Barbra D.; Moore, Ryan M.; Bhavsar, Jaysheel D.; Polson, Shawn W.; Wommack, K. Eric

Reannotation of the Ribonucleotide Reductase in a Cyanophage Reveals Life History Strategies Within the Virioplankton

FRONTIERS IN MICROBIOLOGY

IF4.5

2019-02-05

OAAI

Harrison, Amelia O.; Moore, Ryan M.; Polson, Shawn W.; Wommack, K. Eric

Minimum Information about an Uncultivated Virus Genome (MIUViG)

NATURE BIOTECHNOLOGY

IF41.7

2018-12-17

370

OAAI

Roux, Simon; Adriaenssens, Evelien M.; Dutilh, Bas E.; Koonin, Eugene V.; Kropinski, Andrew M.; Krupovic, Mart; Kuhn, Jens H.; Lavigne, Rob; Brister, J. Rodney; Varsani, Arvind; Amid, Clara; Aziz, Ramy K.; Bordenstein, Seth R.; Bork, Peer; Breitbart, Mya; Cochrane, Guy R.; Daly, Rebecca A.; Desnues, Christelle; Duhaime, Melissa B.; Emerson, Joanne B.; Enault, Francois; Fuhrman, Jed A.; Hingamp, Pascal; Hugenholtz, Philip; Hurwitz, Bonnie L.; Ivanova, Natalia N.; Labonte, Jessica M.; Lee, Kyung-Bum; Malmstrom, Rex R.; Martinez-Garcia, Manuel; Mizrachi, Ilene Karsch; Ogata, Hiroyuki; Paez-Espino, David; Petit, Marie-Agnes; Putonti, Catherine; Rattei, Thomas; Reyes, Alejandro; Rodriguez-Valera, Francisco; Rosario, Karyna; Schriml, Lynn; Schulz, Frederik; Steward, Grieg F.; Sullivan, Matthew B.; Sunagawa, Shinichi; Suttle, Curtis A.; Temperton, Ben; Tringe, Susannah G.; Thurber, Rebecca Vega; Webster, Nicole S.; Whiteson, Katrine L.; Wilhelm, Steven W.; Wommack, K. Eric; Woyke, Tanja; Wrighton, Kelly C.; Yilmaz, Pelin; Yoshida, Takashi; Young, Mark J.; Yutin, Natalya; Allen, Lisa Zeigler; Kyrpides, Nikos C.; Eloe-Fadrosh, Emiley A.

Family A DNA Polymerase Phylogeny Uncovers Diversity and Replication Gene Organization in the Virioplankton

FRONTIERS IN MICROBIOLOGY

IF4.5

2018-12-14

OAAI

Nasko, Daniel J.; Chopyk, Jessica; Sakowski, Eric G.; Ferrell, Barbra D.; Polson, Shawn W.; Wommack, K. Eric

The In-Feed Antibiotic Carbadox Induces Phage Gene Transcription in the Swine Gut Microbiome

MBIO

IF4.7

2017-09-06

OAAI

Johnson, Timothy A.; Looft, Torey; Severin, Andrew J.; Bayles, Darrell O.; Nasko, Daniel J.; Wommack, K. Eric; Howe, Adina; Allen, Heather K.

Novel chaperonins are prevalent in the virioplankton and demonstrate links to viral biology and ecology

ISME JOURNAL

IF10

2017-07-21

OAAI

Marine, Rachel L.; Nasko, Daniel J.; Wray, Jeffrey; Polson, Shawn W.; Wommack, K. Eric

Presence of pathogenic Escherichia coli is correlated with bacterial community diversity and composition on pre-harvest cattle hides

MICROBIOME

IF12.7

2016-03-22

OAAI

Chopyk, Jessica; Moore, Ryan M.; DiSpirito, Zachary; Stromberg, Zachary R.; Lewis, Gentry L.; Renter, David G.; Cernicchiaro, Natalia; Moxley, Rodney A.; Wommack, K. Eric

研究方向