Hani Jieun Kim - Publications, H-index & Citations

Hani Jieun Kim

the university of sydney

14H指数

44论文数

882被引数

收录论文 18

发表时间

Systematic transcriptomic evaluation of blastoid models of early human development 早期人类发育拟胚体模型的系统转录组学评估

Cell Systems

IF7.7

2026-10-02

OAAI

Siqu Long; Hani Jieun Kim; Nazmus Salehin; Hao Huang; Xinran Zhang; Raja Jothi; Pengyi Yang

Oxygen-dependent subcellular redistribution of PHD3 links the hypoxic microenvironment to mitochondrial metabolic reprogramming in ccRCC PHD3的氧气依赖性亚细胞重分布将乏氧微环境与ccRCC线粒体代谢重编程联系起来

Experimental and Molecular Medicine

IF12.9

2026-09-02

OAAI

Jaelim Sim; Soyeon Lim; Changjun Lee; Hani Jieun Kim; Wonseok Lee; Hyeonki Kim; Hojun Lee; Kimyeong Kim; Mahesh Kumar Teli; Kyeong Beom Jo; Jacob Wright; Jee Soo Park; Myung Eun Lee; Minsun Jung; Minsoo Noh; Dae-Kyum Kim; Mi-Hyun Kim; Dong Wook Choi; Tae Su Choi; Won Sik Ham; Hunsang Lee; Haejin Yoon

Phosphoproteomics of aged insulin-resistant bone identifies P70S6K phosphorylation of AFF4 as a gene-specific transcriptional regulator 老年胰岛素抵抗性骨骼的磷酸蛋白质组学鉴定了P70S6K对AFF4的磷酸化作用，作为基因特异性转录调控因子。

Nature Communications

IF15.7

2025-12-31

OAAI

Mriga Dutt; Luoping Liao; Hani Jieun Kim; Ronnie Blazev; Audrey Chan; Hitesh Kore; Ayenachew Bezawork-Geleta; Li Dong; Isela Sarahi Rivera; Natalie K. Y. Wee; Jeffrey Molendijk; Julian P. H. Wong; Vanessa R. Haynes; Veronica Uribe; Gordon S. Lynch; Kelly A. Smith; Magdalene K. Montgomery; Matthew J. Watt; Pengyi Yang; Garron T. Dodd; Stephin J. Vervoort; Natalie A. Sims; Benjamin L. Parker

Connecting cilium, stress response, and proteostasis abnormalities inform variant and therapy assessment in RPGRIP1 retinal organoids 连接连接纤毛、应激反应和蛋白质稳态异常，为RPGRIP1视网膜类器官的变异和治疗方案评估提供信息

Stem Cell Reports

IF5.1

2025-11-20

OAAI

To Ha Loi; Anson Cheng; Hani Jieun Kim; Milan Fernando; Benjamin M. Nash; Nader Aryamanesh; John R. Grigg; Pengyi Yang; Anai Gonzalez-Cordero; Robyn V. Jamieson

Multitask benchmarking of single-cell multimodal omics integration methods 单细胞多模态组学整合方法的多任务基准测试

Nature Methods

IF32.1

2025-10-13

OAAI

Chunlei Liu; Sichang Ding; Hani Jieun Kim; Siqu Long; Di Xiao; Shila Ghazanfar; Pengyi Yang

Lineage contribution of the mesendoderm progenitors in the gastrulating mouse embryo 原肠形成小鼠胚胎中中内胚层祖细胞的谱系贡献

Developmental Cell

IF8.7

2025-03-24

PREAI

V. Pragathi Masamsetti; Nazmus Salehin; Hani Jieun Kim; Nicole Santucci; Megan Weatherstone; Riley McMahon; Lee L. Marshall; Hilary Knowles; Jane Sun; Josh B. Studdert; Nader Aryamanesh; Ran Wang; Naihe Jing; Pengyi Yang; Pierre Osteil; Patrick P.L. Tam

Decoding the hallmarks of allograft dysfunction with a comprehensive pan-organ transcriptomic atlas 用全面的泛器官转录图谱解码同种异体移植物功能障碍的标志

NATURE MEDICINE

IF50

2024-06-18

OAAI

Robertson, Harry; Kim, Hani Jieun; Li, Jennifer; Robertson, Nicholas; Robertson, Paul; Jimenez-Vera, Elvira; Ameen, Farhan; Tran, Andy; Trinh, Katie; O'Connell, Philip J.; Yang, Jean Y. H.; Rogers, Natasha M.; Patrick, Ellis

Evaluating spatially variable gene detection methods for spatial transcriptomics data 评估空间转录组学数据的空间可变基因检测方法

GENOME BIOLOGY

IF9.4

2024-01-15

OAAI

Chen, Carissa; Kim, Hani Jieun; Yang, Pengyi

Gene regulatory network reconstruction: harnessing the power of single-cell multi-omic data 基因调控网络重建: 利用单细胞多组数据的力量

NPJ SYSTEMS BIOLOGY AND APPLICATIONS

IF3.5

2023-10-19

OAAI

Kim, Daniel; Tran, Andy; Kim, Hani Jieun; Lin, Yingxin; Yang, Jean Yee Hwa; Yang, Pengyi

Vascular senescence and leak are features of the early breakdown of the blood-brain barrier in Alzheimer's disease models 血管衰老和渗漏是阿尔茨海默病模型血脑屏障早期破坏的特征

GEROSCIENCE

IF5.4

2023-10-02

OAAI

Ting, Ka Ka; Coleman, Paul; Kim, Hani Jieun; Zhao, Yang; Mulangala, Jocelyne; Cheng, Ngan Ching; Li, Wan; Gunatilake, Dilini; Johnstone, Daniel M.; Loo, Lipin; Neely, G. Gregory; Yang, Pengyi; Gotz, Jurgen; Vadas, Mathew A.; Gamble, Jennifer R.

Comprehensive characterization of fetal and mature retinal cell identity to assess the fidelity of retinal organoids

STEM CELL REPORTS

IF5.1

2023-01-01

OAAI

Kim, Hani Jieun; O'Hara-Wright, Michelle; Kim, Daniel; Ha Loi, To; Lim, Benjamin Y.; V. Jamieson, Robyn; Gonzalez-Cordero, Anai; Yang, Pengyi

Uncovering cell identity through differential stability with Cepo

NATURE COMPUTATIONAL SCIENCE

IF18.3

2021-12-20

OAAI

Kim, Hani Jieun; Wang, Kevin; Chen, Carissa; Lin, Yingxin; Tam, Patrick P. L.; Lin, David M.; Yang, Jean Y. H.; Yang, Pengyi

Transcriptomic Analysis Identifies A Tolerogenic Dendritic Cell Signature 转录组分析鉴定了致耐受性树突状细胞特征

FRONTIERS IN IMMUNOLOGY

IF5.9

2021-10-20

OAAI

Robertson, Harry; Li, Jennifer; Kim, Hani Jieun; Rhodes, Jake W.; Harman, Andrew N.; Patrick, Ellis; Rogers, Natasha M.

Defining cell identity beyond the premise of differential gene expression

CELL REGENERATION

IF4.7

2021-05-01

OAAI

Kim, Hani Jieun; Tam, Patrick P. L.; Yang, Pengyi

PhosR enables processing and functional analysis of phosphoproteomic data

CELL REPORTS

IF6.9

2021-02-01

OAAI

Kim, Hani Jieun; Kim, Taiyun; Hoffman, Nolan J.; Xiao, Di; James, David E.; Humphrey, Sean J.; Yang, Pengyi

scClassify: sample size estimation and multiscale classification of cells using single and multiple reference

MOLECULAR SYSTEMS BIOLOGY

IF7.7

2020-06-22

OAAI

Lin, Yingxin; Cao, Yue; Kim, Hani Jieun; Salim, Agus; Speed, Terence P.; Lin, David M.; Yang, Pengyi; Yang, Jean Yee Hwa

scReClassify: post hoc cell type classification of single-cell rNA-seq data scReClassify: 单细胞rna-seq数据的事后细胞类型分类

BMC GENOMICS

IF3.7

2019-12-24

OAAI

Kim, Taiyun; Lo, Kitty; Geddes, Thomas A.; Kim, Hani Jieun; Yang, Jean Yee Hwa; Yang, Pengyi

Transcriptional network dynamics during the progression of pluripotency revealed by integrative statistical learning

NUCLEIC ACIDS RESEARCH

IF13.1

2019-12-19

OAAI

Kim, Hani Jieun; Osteil, Pierre; Humphrey, Sean J.; Cinghu, Senthilkumar; Oldfield, Andrew J.; Patrick, Ellis; Wilkie, Emilie E.; Peng, Guangdun; Suo, Shengbao; Jothi, Raja; Tam, Patrick P. L.; Yang, Pengyi

研究方向