Alla Lapidus - Publications, H-index & Citations

Alla Lapidus

independent researcher

85H指数

554论文数

4.2W被引数

收录论文 70

发表时间

Isolation of Methanotrophic Consortium from Chernevaya Taiga Soil and Laboratory Research on Its Introduction into Agro-Soil 从切尔涅夫斯卡亚泰加林土壤中分离甲烷营养菌共培养物及其引入农用土壤的实验室研究

Microorganisms

IF4.2

2026-03-03

OAAI

Irina K. Kravchenko; Liana G. Gogmachadze; Aleksei O. Zverev; Marina V. Sukhacheva; Alla L. Lapidus

Metagenomic insights into the development of microbial communities of straw and leaf composts

FRONTIERS IN MICROBIOLOGY

IF4.5

2025-01-22

OAAI

Kimeklis, Anastasiia K.; Gladkov, Grigory V.; Orlova, Olga V.; Lisina, Tatiana O.; Afonin, Alexey M.; Aksenova, Tatiana S.; Kichko, Arina A.; Lapidus, Alla L.; Abakumov, Evgeny V.; Andronov, Evgeny E.

Complete Genome Sequence of a Novel Azospirillum Strain TA Isolated from Western Siberia Chernevaya Taiga Soil

MICROORGANISMS

IF4.2

2024-12-16

OAAI

Rayko, Mikhail; Kravchenko, Irina; Lapidus, Alla

Creation of Cellulolytic Communities of Soil Microorganisms-A Search for Optimal Approaches

MICROORGANISMS

IF4.2

2024-11-09

OAAI

Zverev, Aleksei O.; Kimeklis, Anastasiia K.; Orlova, Olga V.; Lisina, Tatiana O.; Kichko, Arina A.; Pinaev, Alexandr G.; Lapidus, Alla L.; Abakumov, Evgeny V.; Andronov, Evgeny E.

Analysis of rhizosphere fungal community of agricultural crops cultivated in laboratory experiments on Chernevaya taiga soil

WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

IF4.2

2023-12-07

OAAI

Kravchenko, Irina; Rayko, Mikhail; Sokornova, Sophie; Tikhonova, Ekaterina; Konopkin, Aleksey; Lapidus, Alla

Accurate isoform discovery with IsoQuant using long reads

NATURE BIOTECHNOLOGY

IF41.7

2023-01-02

OAAI

Prjibelski, Andrey D.; Mikheenko, Alla; Joglekar, Anoushka; Smetanin, Alexander; Jarroux, Julien; Lapidus, Alla L.; Tilgner, Hagen U.

Editorial: Rising stars in Evolutionary and Genomic Microbiology: 2022

FRONTIERS IN MICROBIOLOGY

IF4.5

2022-12-16

OAAI

Lapidus, Alla; Perez-Rueda, Ernesto

Agricultural Crops Grown in Laboratory Conditions on Chernevaya Taiga Soil Demonstrate Unique Composition of the Rhizosphere Microbiota

MICROORGANISMS

IF4.2

2022-10-31

OAAI

Kravchenko, Irina; Rayko, Mikhail; Tikhonova, Ekaterina; Konopkin, Aleksey; Abakumov, Evgeny; Lapidus, Alla

MetaGT: A pipeline for de novo assembly of metatranscriptomes with the aid of metagenomic data MetaGT: 借助宏基因组数据从头组装元脚本的管道

FRONTIERS IN MICROBIOLOGY

IF4.5

2022-10-28

OAAI

Shafranskaya, Daria; Kale, Varsha; Finn, Rob; Lapidus, Alla L.; Korobeynikov, Anton; Prjibelski, Andrey D.

Distribution of Molecular Weight of Humic Substances Isolated from Soils of Tallgrass Temperate Rainforests (Chernevaya Taiga)

AGRONOMY-BASEL

IF3.4

2022-07-27

OAAI

Polyakov, Vyacheslav; Abakumov, Evgeny; Lodygin, Evgeny; Vasilevich, Roman; Lapidus, Alla

Elemental and Molecular Composition of Humic Acids Isolated from Soils of Tallgrass Temperate Rainforests (Chernevaya taiga) by 1H-13C HECTCOR NMR Spectroscopy

AGRONOMY-BASEL

IF3.4

2021-10-01

OAAI

Polyakov, Vyacheslav; Loiko, Sergey; Istigechev, Georgiy; Lapidus, Alla; Abakumov, Evgeny

Metagenomic Data Assembly - The Way of Decoding Unknown Microorganisms

FRONTIERS IN MICROBIOLOGY

IF4.5

2021-03-23

OAAI

Lapidus, Alla L.; Korobeynikov, Anton I.

Genomic Variations in Drug Resistant Mycobacterium tuberculosis Strains Collected from Patients with Different Localization of Infection 从不同感染位置的患者收集的耐药结核分枝杆菌菌株的基因组变异

ANTIBIOTICS-BASEL

IF4.6

2020-12-31

OAAI

Chernyaeva, Ekaterina; Rotkevich, Mikhail; Krasheninnikova, Ksenia; Lapidus, Alla; Polev, Dmitrii E.; Solovieva, Natalia; Zhuravlev, Viacheslav; Yablonsky, Piotr; O'Brien, Stephen J.

Mixotrophic Iron-Oxidizing Thiomonas Isolates from an Acid Mine Drainage-Affected Creek

APPLIED AND ENVIRONMENTAL MICROBIOLOGY

IF3.7

2020-11-24

OAAI

Akob, Denise M.; Hallenbeck, Michelle; Beulig, Felix; Fabisch, Maria; Kuesel, Kirsten; Keffer, Jessica L.; Woyke, Tanja; Shapiro, Nicole; Lapidus, Alla; Klenk, Hans-Peter; Chan, Clara S.

A New Thioalkalivibrio sp. Strain Isolated from Petroleum-Contaminated Brackish Estuary Sediments: A New Candidate for Bio-Based Application for Sulfide Oxidation in Halo-Alkaline Conditions

WATER

IF3

2020-05-13

OAAI

Becarelli, Simone; La China, Salvatore; Lapidus, Alla; Prijibelski, Andrey; Polev, Dmitrii; Petroni, Giulio; Di Gregorio, Simona

MGnify: the microbiome analysis resource in 2020

NUCLEIC ACIDS RESEARCH

IF13.1

2019-11-07

373

OAAI

Mitchell, Alex L.; Almeida, Alexandre; Beracochea, Martin; Boland, Miguel; Burgin, Josephine; Cochrane, Guy; Crusoe, Michael R.; Kale, Varsha; Potter, Simon C.; Richardson, Lorna J.; Sakharova, Ekaterina; Scheremetjew, Maxim; Korobeynikov, Anton; Shlemov, Alex; Kunyayskaya, Olga; Lapidus, Alla; Finn, Robert D.

rnaSPAdes: a de novo transcriptome assembler and its application to RNA-Seq data rnaSPAdes: 从头转录组组装器及其在rna-seq数据中的应用

GIGASCIENCE

IF3.9

2019-09-03

438

OAAI

Bushmanova, Elena; Antipov, Dmitry; Lapidus, Alla; Prjibelski, Andrey D.

Plasmid detection and assembly in genomic and metagenomic data sets

GENOME RESEARCH

IF5.5

2019-05-02

106

OAAI

Antipov, Dmitry; Raiko, Mikhail; Lapidus, Alla; Pevzner, Pavel A.

Autoprobiotics as an Approach for Restoration of Personalised Microbiota

FRONTIERS IN MICROBIOLOGY

IF4.5

2018-09-12

OAAI

Suvorov, Alexander; Karaseva, Alena; Kotyleva, Marina; Kondratenko, Yulia; Lavrenova, Nadezhda; Korobeynikov, Anton; Kozyrev, Petr; Kramskaya, Tatiana; Leontieva, Galina; Kudryavtsev, Igor; Guo, Danyang; Lapidus, Alla; Ermolenko, Elena

Minimum information about a single amplified genome (MISAG) and a metagenome- assembled genome (MIMAG) of bacteria and archaea (vol 35, pg 725, 2017)关于细菌和古细菌的单个扩增基因组 (MISAG) 和宏基因组组装基因组 (MIMAG) 的最低信息 (第35卷，725页，2017)

NATURE BIOTECHNOLOGY

IF41.7

2018-07-06

OAAI

Bowers, Robert M.; Kyrpides, Nikos C.; Stepanauskas, Ramunas; Harmon-Smith, Miranda; Doud, Devin; Reddy, T. B. K.; Schulz, Frederik; Jarett, Jessica; Rivers, Adam R.; Eloe-Fadrosh, Emiley A.; Tringe, Susannah G.; Ivanova, Natalia N.; Copeland, Alex; Clum, Alicia; Becraft, Eric D.; Malmstrom, Rex R.; Birren, Bruce; Podar, Mircea; Bork, Peer; Weinstock, George M.; Garrity, George M.; Dodsworth, Jeremy A.; Yooseph, Shibu; Sutton, Granger; Glockner, Frank O.; Gilbert, Jack A.; Nelson, William C.; Hallam, Steven J.; Jungbluth, Sean P.; Ettema, Thijs J. G.; Tighe, Scott; Konstantinidis, Konstantinos T.; Liu, Wen-Tso; Baker, Brett J.; Rattei, Thomas; Eisen, Jonathan A.; Hedlund, Brian; McMahon, Katherine D.; Fierer, Noah; Knight, Rob; Finn, Rob; Cochrane, Guy; Karsch-Mizrachi, Ilene; Tyson, Gene W.; Rinke, Christian; Lapidus, Alla; Meyer, Folker; Yilmaz, Pelin; Parks, Donovan H.; Eren, A. M.; Schriml, Lynn; Banfield, Jillian F.; Hugenholtz, Philip; Woyke, Tanja

研究方向