R. Clay Reid

Allen Institute for Brain Science

H指数:71

被引数:2.1万

个人简介

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教育背景

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工作经历

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荣誉奖项

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Functionally identified neuronal assemblies robustly encode stimuli and are structurally delineated by inhibition

功能上确定的神经元集群能够稳健地编码刺激，并且通过抑制在结构上被界定

Cell Reports

IF6.9

2026-08-010

PRE

Wagner-Carena, Julian; Kate, Sai; Riordan, Trevor; Abbasi-Asl, Reza; Aman, Joseph; Amster, Adam; Arkhipov, Anton; Bodor, Agnes L.; Brittain, Derrick; Buchanan, JoAnn; Buice, Michael A.; Bumbarger, Daniel J.; Collman, Forrest; da Costa, Nuno Macarico; Daniel, Scott; Denman, Daniel J.; de Vries, Saskia E. J.; Joyce, Emily; Kapner, Daniel; King, Chase W.; Larkin, Josh D.; Lecoq, Jerome; Mahalingam, Gayathri; Millman, Daniel; Molter, Jan; Morrison, Chris; Reid, R. Clay; Schneider-Mizell, Casey M.; Suckow, Shelby; Takasaki, Kevin T.; Takeno, Marc; Torres, Russel; Vumbaco, David; Waters, Jack; Wyrick, David G.; Yin, Wenjing; Zhuang, Jun; Mihalas, Stefan; Berteau, Stefan

Centimeter-Scale TEM: Extreme Parallelization, Automation and Imaging for VolumeEM and Beyond

厘米级TEM：极端并行化、自动化和成像技术用于体积电子显微镜及其未来发展

Microscopy and Microanalysis

IF3

2026-07-270

OAAI

Author Correction: Foundation model of neural activity predicts response to new stimulus types

作者更正：神经活动的基模预测对新刺激类型的反应

Nature

IF48.5

2026-04-080

OAAI

Reconstructing the human brain’s wiring diagram from axons up

从轴突重建人类大脑的连接图谱

Trends in Neurosciences

IF15.1

2025-12-010

PRE

The synaptic architecture of layer 5 thick tufted excitatory neurons in mouse visual cortex

小鼠视觉皮层第5层粗棘状兴奋性神经元的突触结构

Nature Neuroscience

IF20

2025-07-280

Agnes L. Bodor; Casey M. Schneider-Mizell; Chi Zhang; Leila Elabbady; Alex Mallen; Andi Bergeson; Derrick Brittain; JoAnn Buchanan; Daniel J. Bumbarger; Rachel Dalley; Clare Gamlin; Emily Joyce; Daniel Kapner; Sam Kinn; Gayathri Mahalingam; Sharmishtaa Seshamani; Shelby Suckow; Marc Takeno; Russel Torres; Wenjing Yin; J. Alexander Bae; Manuel A. Castro; Sven Dorkenwald; Akhilesh Halageri; Zhen Jia; Chris Jordan; Nico Kemnitz; Kisuk Lee; Kai Li; Ran Lu; Thomas Macrina; Eric Mitchell; Shanka Subhra Mondal; Shang Mu; Barak Nehoran; Sergiy Popovych; William Silversmith; Nicholas L. Turner; Szi-chieh Yu; William Wong; Jingpeng Wu; Brendan Celii; Luke Campagnola; Stephanie C. Seeman; Tim Jarsky; Naixin Ren; Anton Arkhipov; Jacob Reimer; H. Sebastian Seung; R. Clay Reid; Forrest Collman; Nuno Maçarico da Costa

Inhibitory specificity from a connectomic census of mouse visual cortex (vol 640, pg 448, 2025)

抑制性特异性来自小鼠视觉皮层连接组普查（vol 640, pg 448, 2025）

NATURE

IF48.5

2025-05-190

Schneider-Mizell, Casey M.; Bodor, Agnes L.; Brittain, Derrick; Buchanan, Joann; Bumbarger, Daniel J.; Elabbady, Leila; Gamlin, Clare; Kapner, Daniel; Kinn, Sam; Mahalingam, Gayathri; Seshamani, Sharmishtaa; Suckow, Shelby; Takeno, Marc; Torres, Russel; Yin, Wenjing; Dorkenwald, Sven; Bae, J. Alexander; Castro, Manuel A.; Halageri, Akhilesh; Jia, Zhen; Jordan, Chris; Kemnitz, Nico; Lee, Kisuk; Li, Kai; Lu, Ran; Macrina, Thomas; Mitchell, Eric; Mondal, Shanka Subhra; Mu, Shang; Nehoran, Barak; Popovych, Sergiy; Silversmith, William; Turner, Nicholas L.; Wong, William; Wu, Jingpeng; Reimer, Jacob; Tolias, Andreas S.; Seung, H. Sebastian; Reid, R. Clay; Collman, Forrest; da Costa, Nuno Macarico

Perisomatic ultrastructure efficiently classifies cells in mouse cortex

树突体超微结构可高效地对小鼠皮层细胞进行分类。

NATURE

IF48.5

2025-04-097

Elabbady, Leila; Seshamani, Sharmishtaa; Mu, Shang; Mahalingam, Gayathri; Schneider-Mizell, Casey M.; Bodor, Agnes L.; Bae, J. Alexander; Brittain, Derrick; Buchanan, Joann; Bumbarger, Daniel J.; Castro, Manuel A.; Dorkenwald, Sven; Halageri, Akhilesh; Jia, Zhen; Jordan, Chris; Kapner, Dan; Kemnitz, Nico; Kinn, Sam; Lee, Kisuk; Li, Kai; Lu, Ran; Macrina, Thomas; Mitchell, Eric; Mondal, Shanka Subhra; Nehoran, Barak; Popovych, Sergiy; Silversmith, William; Takeno, Marc; Torres, Russel; Turner, Nicholas L.; Wong, William; Wu, Jingpeng; Yin, Wenjing; Yu, Szi-chieh; Seung, H. Sebastian; Reid, R. Clay; da Costa, Nuno Macarico

Connectomics of predicted Sst transcriptomic types in mouse visual cortex

小鼠视觉皮层中预测的Sst转录组类型的连接组学

NATURE

IF48.5

2025-04-095

Gamlin, Clare R.; Schneider-Mizell, Casey M.; Mallory, Matthew; Elabbady, Leila; Gouwens, Nathan; Williams, Grace; Mukora, Alice; Dalley, Rachel; Bodor, Agnes L.; Brittain, Derrick; Buchanan, JoAnn; Bumbarger, Daniel J.; Joyce, Emily; Kapner, Daniel; Kinn, Sam; Mahalingam, Gayathri; Seshamani, Sharmishtaa; Takeno, Marc; Torres, Russel; Yin, Wenjing; Nicovich, Philip R.; Bae, J. Alexander; Castro, Manuel A.; Dorkenwald, Sven; Halageri, Akhilesh; Jia, Zhen; Jordan, Chris; Kemnitz, Nico; Lee, Kisuk; Li, Kai; Lu, Ran; Macrina, Thomas; Mitchell, Eric; Mondal, Shanka Subhra; Mu, Shang; Nehoran, Barak; Popovych, Sergiy; Silversmith, William; Turner, Nicholas L.; Wong, William; Wu, Jingpeng; Yu, Szi-chieh; Berg, Jim; Jarsky, Tim; Lee, Brian; Seung, H. Sebastian; Zeng, Hongkui; Reid, R. Clay; Collman, Forrest; da Costa, Nuno Macarico

Functional connectomics reveals general wiring rule in mouse visual cortex

功能连接组学揭示了小鼠视觉皮层中的通用布线规则

NATURE

IF48.5

2025-04-094

Ding, Zhuokun; Fahey, Paul G.; Papadopoulos, Stelios; Wang, Eric Y.; Celii, Brendan; Papadopoulos, Christos; Chang, Andersen; Kunin, Alexander B.; Tran, Dat; Fu, Jiakun; Ding, Zhiwei; Patel, Saumil; Ntanavara, Lydia; Froebe, Rachel; Ponder, Kayla; Muhammad, Taliah; Bae, J. Alexander; Bodor, Agnes L.; Brittain, Derrick; Buchanan, Joann; Bumbarger, Daniel J.; Castro, Manuel A.; Cobos, Erick; Dorkenwald, Sven; Elabbady, Leila; Halageri, Akhilesh; Jia, Zhen; Jordan, Chris; Kapner, Dan; Kemnitz, Nico; Kinn, Sam; Lee, Kisuk; Li, Kai; Lu, Ran; Macrina, Thomas; Mahalingam, Gayathri; Mitchell, Eric; Mondal, Shanka Subhra; Mu, Shang; Nehoran, Barak; Popovych, Sergiy; Schneider-Mizell, Casey M.; Silversmith, William; Takeno, Marc; Torres, Russel; Turner, Nicholas L.; Wong, William; Wu, Jingpeng; Yin, Wenjing; Yu, Szi-chieh; Yatsenko, Dimitri; Froudarakis, Emmanouil; Sinz, Fabian; Josic, Kresimir; Rosenbaum, Robert; Seung, H. Sebastian; Collman, Forrest; da Costa, Nuno Macarico; Reid, R. Clay; Walker, Edgar Y.; Pitkow, Xaq; Reimer, Jacob

NEURD offers automated proofreading and feature extraction for connectomics

NEURD提供连接组学的自动化校对和特征提取功能。

NATURE

IF48.5

2025-04-095

Celii, Brendan; Papadopoulos, Stelios; Ding, Zhuokun; Fahey, Paul G.; Wang, Eric; Papadopoulos, Christos; Kunin, Alexander B.; Patel, Saumil; Bae, J. Alexander; Bodor, Agnes L.; Brittain, Derrick; Buchanan, Joann; Bumbarger, Daniel J.; Castro, Manuel A.; Cobos, Erick; Dorkenwald, Sven; Elabbady, Leila; Halageri, Akhilesh; Jia, Zhen; Jordan, Chris; Kapner, Dan; Kemnitz, Nico; Kinn, Sam; Lee, Kisuk; Li, Kai; Lu, Ran; Macrina, Thomas; Mahalingam, Gayathri; Mitchell, Eric; Mondal, Shanka Subhra; Mu, Shang; Nehoran, Barak; Popovych, Sergiy; Schneider-Mizell, Casey M.; Silversmith, William; Takeno, Marc; Torres, Russel; Turner, Nicholas L.; Wong, William; Wu, Jingpeng; Yu, Szi-chieh; Yin, Wenjing; Xenes, Daniel; Kitchell, Lindsey M.; Rivlin, Patricia K.; Rose, Victoria A.; Bishop, Caitlyn A.; Wester, Brock; Froudarakis, Emmanouil; Walker, Edgar Y.; Sinz, Fabian; Seung, H. Sebastian; Collman, Forrest; da Costa, Nuno Macarico; Reid, R. Clay; Pitkow, Xaq; Tolias, Andreas S.; Reimer, Jacob

An unsupervised map of excitatory neuron dendritic morphology in the mouse visual cortex

小鼠视觉皮层中兴奋性神经元树突形态的无监督图谱

NATURE COMMUNICATIONS

IF15.7

2025-04-090

Weis, Marissa A.; Papadopoulos, Stelios; Hansel, Laura; Lueddecke, Timo; Celii, Brendan; Fahey, Paul G.; Wang, Eric Y.; Bae, J. Alexander; Bodor, Agnes L.; Brittain, Derrick; Buchanan, JoAnn; Bumbarger, Daniel J.; Castro, Manuel A.; Collman, Forrest; da Costa, Nuno Macarico; Dorkenwald, Sven; Elabbady, Leila; Halageri, Akhilesh; Jia, Zhen; Jordan, Chris; Kapner, Dan; Kemnitz, Nico; Kinn, Sam; Lee, Kisuk; Li, Kai; Lu, Ran; Macrina, Thomas; Mahalingam, Gayathri; Mitchell, Eric; Mondal, Shanka Subhra; Mu, Shang; Nehoran, Barak; Popovych, Sergiy; Reid, R. Clay; Schneider-Mizell, Casey M.; Seung, H. Sebastian; Silversmith, William; Takeno, Marc; Torres, Russel; Turner, Nicholas L.; Wong, William; Wu, Jingpeng; Yin, Wenjing; Yu, Szi-chieh; Reimer, Jacob; Berens, Philipp; Tolias, Andreas S.

CAVE: Connectome Annotation Versioning Engine

CAVE: 连接组注释版本化引擎

NATURE METHODS

IF32.1

2025-04-092

Dorkenwald, Sven; Schneider-Mizell, Casey M.; Brittain, Derrick; Halageri, Akhilesh; Jordan, Chris; Kemnitz, Nico; Castro, Manual A.; Silversmith, William; Maitin-Shephard, Jeremy; Troidl, Jakob; Pfister, Hanspeter; Gillet, Valentin; Xenes, Daniel; Bae, J. Alexander; Bodor, Agnes L.; Buchanan, Joann; Bumbarger, Daniel J.; Elabbady, Leila; Jia, Zhen; Kapner, Daniel; Kinn, Sam; Lee, Kisuk; Li, Kai; Lu, Ran; Macrina, Thomas; Mahalingam, Gayathri; Mitchell, Eric; Mondal, Shanka Subhra; Mu, Shang; Nehoran, Barak; Popovych, Sergiy; Takeno, Marc; Torres, Russel; Turner, Nicholas L.; Wong, William; Wu, Jingpeng; Yin, Wenjing; Yu, Szi-chieh; Reid, R. Clay; da Costa, Nuno Macarico; Seung, H. Sebastian

Inhibitory specificity from a connectomic census of mouse visual cortex

通过小鼠视觉皮层连接组普查得到的抑制性特异性

NATURE

IF48.5

2025-04-096

Oligodendrocyte precursor cells ingest axons in the mouse neocortex

少突胶质前体细胞摄取小鼠新皮层中的轴突

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2022-11-2365

OAAI

Buchanan, JoAnn; Elabbady, Leila; Collman, Forrest; Jorstad, Nikolas L.; Bakken, Trygve E.; Ott, Carolyn; Glatzer, Jenna; Bleckert, Adam A.; Bodor, Agnes L.; Brittain, Derrick; Bumbarger, Daniel J.; Mahalingam, Gayathri; Seshamani, Sharmishtaa; Schneider-Mizell, Casey; Takeno, Marc M.; Torres, Russel; Yin, Wenjing; Hodge, Rebecca D.; Castro, Manuel; Dorkenwald, Sven; Ih, Dodam; Jordan, Chris S.; Kemnitz, Nico; Lee, Kisuk; Lu, Ran; Macrina, Thomas; Mu, Shang; Popovych, Sergiy; Silversmith, William M.; Tartavull, Ignacio; Turner, Nicholas L.; Wilson, Alyssa M.; Wong, William; Wu, Jingpeng; Zlateski, Aleksandar; Zung, Jonathan; Lippincott-Schwartz, Jennifer; Lein, Ed S.; Seung, H. Sebastian; Bergles, Dwight E.; Reid, R. Clay; da Costa, Nuno Macarico

Binary and analog variation of synapses between cortical pyramidal neurons

皮质锥体神经元之间突触的二进制和模拟变异

ELIFE

IF0

2022-11-1624

Dorkenwald, Sven; Turner, Nicholas L.; Macrina, Thomas; Lee, Kisuk; Lu, Ran; Wu, Jingpeng; Bodor, Agnes L.; Bleckert, Adam A.; Brittain, Derrick; Kemnitz, Nico; Silversmith, William M.; Ih, Dodam; Zung, Jonathan; Zlateski, Aleksandar; Tartavull, Ignacio; Yu, Szi-Chieh; Popovych, Sergiy; Wong, William; Castro, Manuel; Jordan, Chris S.; Wilson, Alyssa M.; Froudarakis, Emmanouil; Buchanan, JoAnn; Takeno, Marc M.; Torres, Russel; Mahalingam, Gayathri; Collman, Forrest; Schneider-Mizell, Casey M.; Bumbarger, Daniel J.; Li, Yang; Becker, Lynne; Suckow, Shelby; Reimer, Jacob; Tolias, Andreas S.; Macarico da Costa, Nuno; Reid, R. Clay; Seung, H. Sebastian

A scalable and modular automated pipeline for stitching of large electron microscopy datasets

ELIFE

IF0

2022-07-269

A hybrid open-top light-sheet microscope for versatile multi-scale imaging of cleared tissues

用于清除组织的多功能多尺度成像的混合开放式光片显微镜

NATURE METHODS

IF32.1

2022-05-1165

Glaser, Adam K.; Bishop, Kevin W.; Barner, Lindsey A.; Susaki, Etsuo A.; Kubota, Shimpei I.; Gao, Gan; Serafin, Robert B.; Balaram, Pooja; Turschak, Emily; Nicovich, Philip R.; Lai, Hoyin; Lucas, Luciano A. G.; Yi, Yating; Nichols, Eva K.; Huang, Hongyi; Reder, Nicholas P.; Wilson, Jasmine J.; Sivakumar, Ramya; Shamskhou, Elya; Stoltzfus, Caleb R.; Wei, Xing; Hempton, Andrew K.; Pende, Marko; Murawala, Prayag; Dodt, Hans-Ulrich; Imaizumi, Takato; Shendure, Jay; Beliveau, Brian J.; Gerner, Michael Y.; Xin, Li; Zhao, Hu; True, Lawrence D.; Reid, R. Clay; Chandrashekar, Jayaram; Ueda, Hiroki R.; Svoboda, Karel; Liu, Jonathan T. C.

Laminar distribution and arbor density of two functional classes of thalamic inputs to primary visual cortex

CELL REPORTS

IF6.9

2021-10-015

OAAI

Chromatic micromaps in primary visual cortex

NATURE COMMUNICATIONS

IF15.7

2021-04-1914

OAAI

Relationship between simultaneously recorded spiking activity and fluorescence signal in GCaMP6 transgenic mice

ELIFE