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Progress toward a universal biomedical data translator

delete2022-06-06
delete17
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OA
AI
K
Karamarie Fecho *
A
Anne Thessen
S
Sergio E. Baranzini
C
Chris Bizon
J
Jennifer Hadlock
S
Sui Huang
R
Ryan Roper
S
Southall, Noel
C
Casey Ta
P
Paul B. Watkins
M
Mark D. Williams
许
许浩 (Hao Xu)
W
William E. Byrd
V
Vlado Dančík
M
Marc Duby
M
Michel Dumontier
G
Gustavo Glusman
N
Nomi L. Harris
E
Eugene W. Hinderer
G
Greg Hyde
A
Adam J. Johs
A
Andrew I. Su
G
Guangrong Qin
Q
Qian Zhu
DOI:10.1111/cts.13301delete
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摘要

摘要

En 中文
Clinical, biomedical, and translational science has reached an inflection point in the breadth and diversity of available data and the potential impact of such data to improve human health and well-being. However, the data are often siloed, disorganized, and not broadly accessible due to discipline-specific differences in terminology and representation. To address these challenges, the Biomedical Data Translator Consortium has developed and tested a pilot knowledge graph-based Translator system capable of integrating existing biomedical data sets and translating those data into insights intended to augment human reasoning and accelerate translational science. Having demonstrated feasibility of the Translator system, the Translator program has since moved into development, and the Translator Consortium has made significant progress in the research, design, and implementation of an operational system. Herein, we describe the current system's architecture, performance, and quality of results. We apply Translator to several real-world use cases developed in collaboration with subject-matter experts. Finally, we discuss the scientific and technical features of Translator and compare those features to other state-of-the-art, biomedical graph-based question-answering systems.

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Clinical and Translational Science 封面图
Clinical and Translational Science
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Columbia University
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national institutes of health (nih) - usa
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University of Alabama Birmingham
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university of california san francisco
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university of colorado anschutz medical campus
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institute for systems biology (isb)
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引用论文

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Toward A Universal Biomedical Data Translator
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