arrow
返回

Proteomics Software in bio.tools: Coverage and Annotations

delete2021-03-15
delete2
delete
OA
AI
V
Veit Schwämmle *
J
Jennifer Harrow
H
Hans Ienasescu
DOI:10.1021/acs.jproteome.0c00978delete
delete原文链接
delete分享
delete收藏
查看原文
摘要

摘要

En 中文
The large diversity of experimental methods in proteomics as well as their increasing usage across biological and clinical research has led to the development of hundreds if not thousands of software tools to aid in the analysis and interpretation of the resulting data. Detailed information about these tools needs to be collected, categorized, and validated to guarantee their optimal utilization. A tools registry like bio.tools enables users and developers to identify new tools with more powerful algorithms or to find tools with similar functions for comparison. Here we present the content of the registry, which now comprises more than 1000 proteomics tool entries. Furthermore, we discuss future applications and engagement with other community efforts resulting in a high impact on the bioinformatics landscape.
Keyword:
tools
annotation
registry
ELIXIR
workflows
curation
AI总结

AI总结

对已上传原文的论文进行重点信息的提取,主要内容包括:简要概述、研究摘要、背景介绍、关键亮点、图文解析、展望与总结。

期刊

Journal of Proteome Research 封面图
Journal of Proteome Research
IF:
3.6
论文数:
9.4K
被引数:
2.3W

机构

T
technical university of denmark
学者数:
2.6W
论文数: 2.8W
被引数: 37
U
University of Southern Denmark
学者数:
2.1W
论文数: 2.0W
被引数: 2.9W
引用论文

引用论文

One Thousand and One Software for Proteomics: Tales of the Toolmakers of Science
err2019-08-20
err17
errOAAI
errTsiamis, Vasileios; Ienasescu, Hans-Ioan; Gabrielaitis, Dovydas; Palmblad, Magnus; Schwammle, Veit; Ison, Jon
err分享
err收藏
err
IF0
err
err0
PREAI
err
err分享
err收藏
biotoolsSchema: a formalized schema for bioinformatics software descriptionbiotoolsSchema: 生物信息学软件描述的形式化模式
err2021-01-27
err2
errOAAI
errIson, Jon; Ienasescu, Hans; Rydza, Emil; Chmura, Piotr; Rapacki, Kristoffer; Gaignard, Alban; Schwaemmle, Veit; van Helden, Jacques; Kalas, Matus; Menager, Herve
err分享
err收藏
ProteomeXchange provides globally coordinated proteomics data submission and dissemination
err2014-03-10
err2.3K
errOAAI
errVizcaino, Juan A.; Deutsch, Eric W.; Wang, Rui; Csordas, Attila; Reisinger, Florian; Rios, Daniel; Dianes, Jose A.; Sun, Zhi; Farrah, Terry; Bandeira, Nuno; Binz, Pierre-Alain; Xenarios, Ioannis; Eisenacher, Martin; Mayer, Gerhard; Gatto, Laurent; Campos, Alex; Chalkley, Robert J.; Kraus, Hans-Joachim; Pablo Albar, Juan; Martinez-Bartolome, Salvador; Apweiler, Rolf; Omenn, Gilbert S.; Martens, Lennart; Jones, Andrew R.; Hermjakob, Henning
err分享
err收藏
Robust automated computational approach for classifying frontotemporal neurodegeneration: Multimodal/multicenter neuroimaging
err2019-12-01
err0
errOAAI
errPatricio Andres Donnelly‐Kehoe; Guido Orlando Pascariello; Adolfo M. García; John R. Hodges; Bruce Miller; Howie Rosen; Facundo Manes; Ramon Landin‐Romero; Diana Matallana; Cecilia Serrano; Eduar Herrera; Pablo Reyes; Hernando Santamaria‐Garcia; Fiona Kumfor; Olivier Piguet; Agustin Ibanez; Lucas Sedeño
err分享
err收藏
Bioconda: sustainable and comprehensive software distribution for the life sciences
err2018-07-02
err526
errOAAI
errGruening, Bjoern; Dale, Ryan; Sjoedin, Andreas; Chapman, Brad A.; Rowe, Jillian; Tomkins-Tinch, Christopher H.; Valieris, Renan; Koester, Johannes; Team, Bioconda
err分享
err收藏
The bio.tools registry of software tools and data resources for the life sciences
err2019-08-12
err31
errOAAI
errIson, Jon; Ienasescu, Hans; Chmura, Piotr; Rydza, Emil; Menager, Herve; Kalas, Matus; Schwammle, Veit; Gruening, Bjoern; Beard, Niall; Lopez, Rodrigo; Duvaud, Severine; Stockinger, Heinz; Persson, Bengt; Varekova, Radka Svobodova; Racek, Tomas; Vondrasek, Jiri; Peterson, Hedi; Salumets, Ahto; Jonassen, Inge; Hooft, Rob; Nyronen, Tommi; Valencia, Alfonso; Capella, Salvador; Gelpi, Josep; Zambelli, Federico; Savakis, Babis; Leskosek, Brane; Rapacki, Kristoffer; Blanchet, Christophe; Jimenez, Rafael; Oliveira, Arlindo; Vriend, Gert; Collin, Olivier; van Helden, Jacques; Longreen, Peter; Brunak, Soren
err分享
err收藏
学者 查看更多内容