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Software Tools for 2D Cell Segmentation
DOI:10.3390/cells13040352.png)
摘要
En 中文
Cell segmentation is an important task in the field of image processing, widely used in the life sciences and medical fields. Traditional methods are mainly based on pixel intensity and spatial relationships, but have limitations. In recent years, machine learning and deep learning methods have been widely used, providing more-accurate and efficient solutions for cell segmentation. The effort to develop efficient and accurate segmentation software tools has been one of the major focal points in the field of cell segmentation for years. However, each software tool has unique characteristics and adaptations, and no universal cell-segmentation software can achieve perfect results. In this review, we used three publicly available datasets containing multiple 2D cell-imaging modalities. Common segmentation metrics were used to evaluate the performance of eight segmentation tools to compare their generality and, thus, find the best-performing tool.
Keyword:
cell segmentation
image processing
2D cell
performance
AI总结
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期刊
IF:
5.2
论文数:
2.1W
被引数:
9.4W
机构
引用论文
A SIMPLI (Single-cell Identification from MultiPLexed Images) approach for spatially-resolved tissue phenotyping at single-cell resolution
NATURE COMMUNICATIONS
IF15.7
ilastik: interactive machine learning for (bio) image analysisilastik: 用于 (生物) 图像分析的交互式机器学习
NATURE METHODS
IF32.1
Whole-cell segmentation of tissue images with human-level performance using large-scale data annotation and deep learning使用大规模数据注释和深度学习对组织图像进行具有人类水平性能的全细胞分割
NATURE BIOTECHNOLOGY
IF41.7

