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Biological imaging software tools

delete2012-06-28
delete435
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OA
AI
K
Kevin W. Eliceiri *
M
Michael R. Berthold
I
I. Goldberg
L
Luis Ibáñez
B
B. S. Manjunath
M
Maryann E. Martone
R
Robert F. Murphy
P
Peng, Hanchuan
A
Anne L. Plant
B
Badrinath Roysam
N
Nico Stuurman
J
Jason R. Swedlow
P
Pavel Tomančák
A
Anne E. Carpenter
DOI:10.1038/NMETH.2084delete
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Abstract

Abstract

En 中文
Few technologies are more widespread in modern biological laboratories than imaging. Recent advances in optical technologies and instrumentation are providing hitherto unimagined capabilities. Almost all these advances have required the development of software to enable the acquisition, management, analysis and visualization of the imaging data. We review each computational step that biologists encounter when dealing with digital images, the inherent challenges and the overall status of available software for bioimage informatics, focusing on open-source options.
Keywords:
SUBCELLULAR LOCATION PATTERNS
ILLUMINATION MICROSCOPY
PLANE ILLUMINATION
CELLS
VISUALIZATION
MACHINE
CLASSIFICATION
MANAGEMENT
RESOLUTION
ELEGANS

Journal

Nature Methods cover
Nature Methods
IF:
32.1
Papers:
7.3K
Citations:
12.7W

Organization

K
kitware, inc.
Scholars:
123
Papers: 68
Citations: 1
N
national institutes of health (nih) - usa
Scholars:
10.3W
Papers: 8.2W
Citations: 111
U
University of Konstanz
Scholars:
209
Papers: 93
Citations: 0
C
Carnegie Mellon University
Scholars:
605
Papers: 240
Citations: 0
U
university of wisconsin madison
Scholars:
608
Papers: 215
Citations: 0
University of Wisconsin System cover
University of Wisconsin System
Scholars:
6.7W
Papers: 5.8W
Citations: 382
U
university of houston system
Scholars:
121
Papers: 363
Citations: 0
University of California System cover
University of California System
Scholars:
37.7W
Papers: 33.8W
Citations: 6.6K
U
University of California San Diego
Scholars:
1.9K
Papers: 574
Citations: 0
N
nih national institute on aging (nia)
Scholars:
0
Papers: 26
Citations: 0
N
national institute of standards & technology (nist) - usa
Scholars:
9.7K
Papers: 9.0K
Citations: 4
H
Howard Hughes Medical Institute
Scholars:
406
Papers: 123
Citations: 0
U
university of california santa barbara
Scholars:
239
Papers: 101
Citations: 0
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