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Biological imaging software tools

delete2012-06-28
delete435
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OA
AI
K
Kevin W. Eliceiri *
M
Michael R. Berthold
I
I. Goldberg
L
Luis Ibáñez
B
B. S. Manjunath
M
Maryann E. Martone
R
Robert F. Murphy
P
Peng, Hanchuan
A
Anne L. Plant
B
Badrinath Roysam
N
Nico Stuurman
J
Jason R. Swedlow
P
Pavel Tomančák
A
Anne E. Carpenter
DOI:10.1038/NMETH.2084delete
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Abstract

Abstract

En 中文
Few technologies are more widespread in modern biological laboratories than imaging. Recent advances in optical technologies and instrumentation are providing hitherto unimagined capabilities. Almost all these advances have required the development of software to enable the acquisition, management, analysis and visualization of the imaging data. We review each computational step that biologists encounter when dealing with digital images, the inherent challenges and the overall status of available software for bioimage informatics, focusing on open-source options.
Keywords:
SUBCELLULAR LOCATION PATTERNS
ILLUMINATION MICROSCOPY
PLANE ILLUMINATION
CELLS
VISUALIZATION
MACHINE
CLASSIFICATION
MANAGEMENT
RESOLUTION
ELEGANS
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Nature Methods cover
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