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HIV-1 usurps mixed-charge domain-dependent CPSF6 phase separation for higher-order capsid binding, nuclear entry and viral DNA integration

delete2024-09-11
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OA
AI
S
Sooin Jang
G
Gregory J. Bedwell
S
Satya P. Singh
H
Hyun Jae Yu
B
Bjarki Arnarson
P
Parmit K. Singh
R
Rajalingam Radhakrishnan
A
AidanDarian W Douglas
Z
Zachary Ingram
C
Christian Freniere
O
Onno Akkermans
S
Stefan G. Sarafianos
Z
Zandrea Ambrose
Y
Yong Xiong
P
Praju Vikas Anekal
P
Paula Montero Llopis
V
Vineet N. KewalRamani
A
Ashwanth C. Francis
A
Alan Engelman *
DOI:10.1093/nar/gkae769delete
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Abstract

Abstract

En 中文
HIV-1 integration favors nuclear speckle (NS)-proximal chromatin and viral infection induces the formation of capsid-dependent CPSF6 condensates that colocalize with nuclear speckles (NSs). Although CPSF6 displays liquid-liquid phase separation (LLPS) activity in vitro, the contributions of its different intrinsically disordered regions, which includes a central prion-like domain (PrLD) with capsid binding FG motif and C-terminal mixed-charge domain (MCD), to LLPS activity and to HIV-1 infection remain unclear. Herein, we determined that the PrLD and MCD both contribute to CPSF6 LLPS activity in vitro. Akin to FG mutant CPSF6, infection of cells expressing MCD-deleted CPSF6 uncharacteristically arrested at the nuclear rim. While heterologous MCDs effectively substituted for CPSF6 MCD function during HIV-1 infection, Arg-Ser domains from related SR proteins were largely ineffective. While MCD-deleted and wildtype CPSF6 proteins displayed similar capsid binding affinities, the MCD imparted LLPS-dependent higher-order binding and co-aggregation with capsids in vitro and in cellulo. NS depletion reduced CPSF6 puncta formation without significantly affecting integration into NS-proximal chromatin, and appending the MCD onto a heterologous capsid binding protein partially restored virus nuclear penetration and integration targeting in CPSF6 knockout cells. We conclude that MCD-dependent CPSF6 condensation with capsids underlies post-nuclear incursion for viral DNA integration and HIV-1 pathogenesis. Graphical Abstract
Keywords:
FACTOR-I-M
SPLICING FACTORS
STRUCTURAL BASIS
RS DOMAIN
RNA
CLEAVAGE
PROTEIN
SPECIFICITY
INFECTION
LEDGF/P75
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Journal

Nucleic Acids Research cover
Nucleic Acids Research
IF:
13.1
Papers:
3.6W
Citations:
29.0W

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national institutes of health (nih) - usa
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Citations: 111
State University System of Florida cover
State University System of Florida
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H
Harvard University
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Florida State University
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pennsylvania commonwealth system of higher education (pcshe)
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N
nih national cancer institute (nci)
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2.1W
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H
Harvard Medical School
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6.5W
Papers: 4.8W
Citations: 91
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