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Image-based cell phenotyping with deep learning

delete2021-12-01
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PRE
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A
Aditya Pratapa
M
Michael Doron
J
Juan Carlos Caicedo *
DOI:10.1016/j.cbpa.2021.04.001delete
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Abstract

Abstract

En 中文
A cell's phenotype is the culmination of several cellular processes through a complex network of molecular interactions that ultimately result in a unique morphological signature. Visual cell phenotyping is the characterization and quantification of these observable cellular traits in images. Recently, cellular phenotyping has undergone a massive overhaul in terms of scale, resolution, and throughput, which is attributable to advances across electronic, optical, and chemical technologies for imaging cells. Coupled with the rapid acceleration of deep learning-based computational tools, these advances have opened up new avenues for innovation across a wide variety of high-throughput cell biology applications. Here, we review applications wherein deep learning is powering the recognition, profiling, and prediction of visual phenotypes to answer important biological questions. As the complexity and scale of imaging assays increase, deep learning offers computational solutions to elucidate the details of previously unexplored cellular phenotypes.
Keywords:
Deep learning
Cell phenotyping
Phenotypic screening
Image
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Journal

Current Opinion in Chemical Biology cover
Current Opinion in Chemical Biology
IF:
6.1
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Harvard University
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Citations: 28.7W