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Deconvolution of cell types and states in spatial multiomics utilizing TACIT Huynh, Khoa L. A.; Tyc, Katarzyna M.; Matuck, Bruno F.; Easter, Quinn T.; Pratapa, Aditya; Kumar, Nikhil V.; Perez, Paola; Kulchar, Rachel J.; Pranzatelli, Thomas J. F.; de Souza, Deiziane; Weaver, Theresa M.; Qu, Xufeng; Soares Junior, Luiz Alberto Valente; Dolhnokoff, Marisa; Kleiner, David E.; Hewitt, Stephen M.; da Silva, Luiz Fernando Ferraz; Rocha, Vanderson Geraldo; Warner, Blake M.; Byrd, Kevin M.; Liu, Jinze Share Save
Androgen Deprivation Therapy Drives a Distinct Immune Phenotype in Localized Prostate Cancer Dallos, Matthew C.; Obradovic, Aleksandar Z.; Mccann, Patrick; Chowdhury, Nivedita; Pratapa, Aditya; Aggen, David H.; Gaffney, Christopher; Autio, Karen A.; Virk, Renu K.; De Marzo, Angelo M.; Antonarakis, Emmanuel S.; Scher, Howard I.; Drake, Charles G.; Rathkopf, Dana E. Share Save
Single-cell spatial multiomics reveals tumor microenvironment vulnerabilities in cancer resistance to immunotherapy Quek, Camelia; Pratapa, Aditya; Bai, Xinyu; Al-Eryani, Ghamdan; da Silva, Ines Pires; Mayer, Aaron; Bartonicek, Nenad; Harvey, Kate; Maher, Nigel G.; Conway, Jordan W.; Kasalo, Rebecca J.; Ben Cheikh, Bassem; Braubach, Oliver; Palendira, Umaimainthan; Saw, Robyn P. M.; Stretch, Jonathan R.; Shannon, Kerwin F.; Menzies, Alexander M.; Scolyer, Richard A.; Long, Georgina V.; Swarbrick, Alexander; Wilmott, James S. Share Save
Integration of high-plex tumor-Immune phenotyping and checkpoint interactions for deeper spatial characterization of human cancer tissues Bodbin, Sara; Ma, Ning; Pratapa, Aditya; Nikulina, Nadya; Monkman, James; Jhaveri, Niyati; Elofsson, Hampus; Basu, Subham; Zieba-Wicher, Agata; Kulasinghe, Arutha Share Save
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Mutational analysis and spatial phenotyping to decipher racial disparities in pancreatic adenocarcinoma Salas-Escabillas, Daniel James; Ma, Ning; Ben Cheikh, Bassem; Pratapa, Aditya; Pichardo, Thais; Langley, Kyra; Clark, Julie; Steele, Nina; Jhaveri, Niyati; Kwon, David; Crawford, Howard C. Share Save
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Comparative spatial analyses of the tumor immune landscape in different mouse models of glioblastoma Klymyshyn, Dmytro; Jhaveri, Niyati; Pratapa, Aditya; Nikulina, Nadezhda; Tam, Tsz H.; Nelson, Nadine; Dolcetti, Riccardo; Moi, Davide; Mazzieri, Roberta; Mantamadiotis, Theo Share Save
Multi-parametric comparison of scRNA-seq with CITE-seq and ultrahigh-plex spatial phenotyping of proteins in FFPE head and neck tumor biopsies: An opportunity to generate uniquely comprehensive multi-omic single cell datasets to investigate the tumor microenvironment Pratapa, Aditya; Jensen, Shawn M.; Jhaveri, Niyati; Koguchi, Yoshinobu; Rajamanickam, Venkatesh; Bernard, Brady; Christie, Tanisha; Piening, Brian; Leidner, Rom S.; Braubach, Oliver; Fox, Bernard A. Share Save
Distinct spatial and molecular maps in the tumour microenvironment of resistant melanoma patients treated with checkpoint inhibitor immunotherapy Quek, Camelia; Pratapa, Aditya; da Silva, Ines Pires; Al-Eryani, Ghamdan; Mayer, Aaron; Bartonicek, Nenad; Harvey, Kate; Braubach, Oliver; Saw, Robyn P. M.; Stretch, Jonathan; Shannon, Kerwin F.; Menzies, Alexander M.; Scolyer, Richard A.; Long, Georgina V.; Swarbrick, Alexander; Wilmott, James S. Share Save
Single cell, multiomic spatial phenotyping of immunotherapy responses in head and neck cancer Ji, HaYeun; Jhaveri, Niyati; Ma, Ning; Cheikh, Bassem B.; Pratapa, Aditya; Monkman, James; O'Byrne, Ken; Hughes, Brett; Kulasinghe, Arutha; Braubach, Oliver Share Save
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Multiple Myeloma DREAM Challenge reveals epigenetic regulator PHF19 as marker of aggressive disease Mason, Mike J.; Schinke, Carolina; Eng, Christine L. P.; Towfic, Fadi; Gruber, Fred; Dervan, Andrew; White, Brian S.; Pratapa, Aditya; Guan, Yuanfang; Chen, Hongjie; Cui, Yi; Li, Bailiang; Yu, Thomas; Chaibub Neto, Elias; Mavrommatis, Konstantinos; Ortiz, Maria; Lyzogubov, Valeriy; Bisht, Kamlesh; Dai, Hongyue Y.; Schmitz, Frank; Flynt, Erin; Rozelle, Dan; Danziger, Samuel A.; Ratushny, Alexander; Dalton, William S.; Goldschmidt, Hartmut; Avet-Loiseau, Herve; Samur, Mehmet; Hayete, Boris; Sonneveld, Pieter; Shain, Kenneth H.; Munshi, Nikhil; Auclair, Daniel; Hose, Dirk; Morgan, Gareth; Trotter, Matthew; Bassett, Douglas; Goke, Jonathan; Walker, Brian A.; Thakurta, Anjan; Guinney, Justin Share Save
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