logo
CanyamAI summaries for academic research
language
MobileMobile
  • Phone FeatureWeChat Mini Program
EnglishEnglish
noticeNotice
BlogBlog
delete
arrow
Back
H

Hirak Sarkar

princeton university

16H-index
94Paper Count
2.5KCitation Count
Published Papers 9
Publication Date
logo
Joint imputation and deconvolution of gene expression across spatial transcriptomics platforms
errGENOME RESEARCH
IF5.5
err2025-12-01
err1
PREAI
errZheng, Hongyu; Sarkar, Hirak; Raphael, Benjamin J.
errShare
errSave
Tumors hijack macrophages for iron supply to promote bone metastasis and anemia
errCell
IF42.5
err2025-09-03
err0
PREAI
errYujiao Han; Hirak Sarkar; Zhan Xu; Sereno Lopez-Darwin; Yong Wei; Xiang Hang; Fengshuo Liu; Kimberley Tran; Wei Wang; Jennifer M. Miller; Christina J. DeCoste; Dylan S. Blohm; Robert L. Satcher; Xiang H.-F. Zhang; Yibin Kang
errShare
errSave
Deciphering normal and cancer stem cell niches by spatial transcriptomics: opportunities and challenges
errGENES & DEVELOPMENT
IF7.7
err2024-11-04
err0
errOAAI
errSarkar, Hirak; Lee, Eunmi; Lopez-Darwin, Sereno L.
errShare
errSave
Single-cell analyses of metastatic bone marrow in human neuroblastoma reveals microenvironmental remodeling and metastatic
errJCI INSIGHT
IF6.1
err2024-02-15
err3
errOAAI
errMei, Shenglin; Alchahin, Adele M.; Embaie, Bethel Tesfai; Gavriliuc, Ioana Maria; Verhoeven, Bronte Manouk; Zhao, Ting; Li, Xiangyun; Jeffries, Nathan Elias; Pepich, Adena; Sarkar, Hirak; Olsen, Thale Kristin; Wickstrom, Malin; Stenman, Jakob; Reina-Bedoya, Oscar; Kharchenko, Peter V.; Saylor, Philip J.; Johnsen, John Inge; Sykes, David B.; Kogner, Per; Baryawno, Ninib
errShare
errSave
Single-cell analysis of immune and stroma cell remodeling in renal cell carcinoma primary tumors and bone metastatic lesions
errCANCER RESEARCH
IF16.6
err2023-04-04
err0
PREAI
errMei, Shenglin; Alchahin, Adele M.; Tsea, Ioanna; Kfoury, Youmna; Taghreed, Taghreed; Sarkar, Hirak; Wu, Shulin; Subtelny, Alexander O.; Zhang, Yida; Salari, Keyan; Wu, Chin-Lee; Randolph, Mark A.; Scadden, David T.; Dahl, Douglas; Shin, John; Kharchenko, Peter; Saylor, Philip; Sykes, David; Baryawno, Ninib
errShare
errSave
Dissecting the immune suppressive human prostate tumor microenvironment via integrated single-cell and spatial transcriptomic analyses
errNATURE COMMUNICATIONS
IF15.7
err2023-02-07
err67
errOAAI
errHirz, Taghreed; Mei, Shenglin; Sarkar, Hirak; Kfoury, Youmna; Wu, Shulin; Verhoeven, Bronte M.; Subtelny, Alexander O.; Zlatev, Dimitar V.; Wszolek, Matthew W.; Salari, Keyan; Murray, Evan; Chen, Fei; Macosko, Evan Z.; Wu, Chin-Lee; Scadden, David T.; Dahl, Douglas M.; Baryawno, Ninib; Saylor, Philip J.; Kharchenko, Peter V.; Sykes, David B.
errShare
errSave
Haplotype-aware analysis of somatic copy number variations from single -cell transcriptomes
errNATURE BIOTECHNOLOGY
IF41.7
err2022-09-26
err37
PREAI
errGao, Teng; Soldatov, Ruslan; Sarkar, Hirak; Kurkiewicz, Adam; Biederstedt, Evan; Loh, Po-Ru; Kharchenko, Peter, V
errShare
errSave
Alevin-fry unlocks rapid, accurate and memory-frugal quantification of single-cell RNA-seq data
errNATURE METHODS
IF32.1
err2022-03-11
err36
errOAAI
errHe, Dongze; Zakeri, Mohsen; Sarkar, Hirak; Soneson, Charlotte; Srivastava, Avi; Patro, Rob
errShare
errSave
Alignment and mapping methodology influence transcript abundance estimation
errGENOME BIOLOGY
IF9.4
err2020-09-07
err74
errOAAI
errSrivastava, Avi; Malik, Laraib; Sarkar, Hirak; Zakeri, Mohsen; Almodaresi, Fatemeh; Soneson, Charlotte; Love, Michael I.; Kingsford, Carl; Patro, Rob
errShare
errSave

Research Directions

No research directions
Co-authors
Cooperation Journals
D
David T. Scadden
H-index: 124 · Papers: 666
Y
Yibin Kang
H-index: 91 · Papers: 373
P
Peter V. Kharchenko
H-index: 80 · Papers: 249
B
Benjamin J. Raphael
H-index: 79 · Papers: 445
C
Chin‐Lee Wu
H-index: 76 · Papers: 608
View more