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A

Aaron R. Quinlan

University of Utah

57H-index
261Paper Count
5.2WCitation Count
Published Papers 80
Publication Date
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Human acrocentric chromosome short-arm de novo mutation and recombination
errCell
IF42.5
err2026-08-06
err0
errOAAI
errJiadong Lin; F. Kumara Mastrorosa; Michelle D. Noyes; DongAhn Yoo; Arang Rhie; David Porubsky; Kendra Hoekzema; Katherine M. Munson; Nidhi Koundinya; W. Scott Watkins; Lynn B. Jorde; Aaron R. Quinlan; Deborah W. Neklason; Adam M. Phillippy; Evan E. Eichler
errShare
errSave
The selective dynamics of interruptions at short tandem repeats
errGenetics
IF5.1
err2026-04-01
err0
PREAI
errGoldberg, Michael E.; Dashnow, Harriet; Harris, Kelley; Quinlan, Aaron R.
errShare
errSave
Inherited Genetic Risk in Stillbirth: A Shared Genomic Segments Analysis of High-Risk Pedigrees.
errHuman Genetics and Genomics Advances
IF3.6
err2025-11-12
err0
errOAAI
errTsegaselassie Workalemahu; Michael J. Madsen; Sarah Lopez; Jessica M. Page; Nathan R. Blue; Cecile Avery; Rob Sargent; Zhe Yu; Emily Guinto; D.Ware Branch; Susannah Leisher; Lynn B. Jorde; Aaron Quinlan; Hilary Coon; Michael W. Varner; Claire T. Roberts; Deborah W. Neklason; Nicola J. Camp; Robert M. Silver
errShare
errSave
The Platinum Pedigree: a long-read benchmark for genetic variants
errNature Methods
IF32.1
err2025-08-04
err0
errOAAI
errZev Kronenberg; Cillian Nolan; David Porubsky; Tom Mokveld; William J. Rowell; Sangjin Lee; Egor Dolzhenko; Pi-Chuan Chang; James M. Holt; Christopher T. Saunders; Nathan D. Olson; Cody J. Steely; Sean McGee; Andrea Guarracino; Nidhi Koundinya; William T. Harvey; W. Scott Watkins; Katherine M. Munson; Kendra Hoekzema; Khi Pin Chua; Xiao Chen; Cairbre Fanslow; Christine Lambert; Harriet Dashnow; Erik Garrison; Joshua D. Smith; Peter M. Lansdorp; Justin M. Zook; Andrew Carroll; Lynn B. Jorde; Deborah W. Neklason; Aaron R. Quinlan; Evan E. Eichler; Michael A. Eberle
errShare
errSave
STRchive: a dynamic resource detailing population-level and locus-specific insights at tandem repeat disease loci
errGENOME MEDICINE
IF11.2
err2025-03-26
err0
errOAAI
errHiatt, Laurel; Weisburd, Ben; Dolzhenko, Egor; Rubinetti, Vincent; Avvaru, Akshay K.; Vannoy, Grace E.; Kurtas, Nehir Edibe; Rehm, Heidi L.; Quinlan, Aaron R.
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errSave
The Utah NeoSeq Project: a collaborative multidisciplinary program to facilitate genomic diagnostics in the neonatal intensive care unit
errNPJ GENOMIC MEDICINE
IF4.8
err2025-03-23
err0
errOAAI
errJenkins, Sabrina Malone; Palmquist, Rachel N.; Moore, Barry; Boyden, Steven E.; Nicholas, Thomas J.; Bayrak-Toydemir, Pinar; Mao, Rong; Farrell, J. Andrew R.; Holt, Carson H.; Rynearson, Shawn G.; Solorzano, Chelsea M.; Ward, Alistair; Best, D. Hunter; Al-Sweel, Najla; Bentley, Dawn L.; Brunelli, Luca; Chow, Clement Y.; Close, Devin W.; Cormier, Michael J.; Deshotel, Malia J.; Durtschi, Jacob; Eide, Erik J.; Floyd, Luaiva; Fredrickson, Eric K.; Fulmer, Makenzie L.; Hernandez, Edgar J.; Kapron, Ashley L.; Karren, Mary Anne; Lewis, Robert G.; Miller, Christine E.; Murtaugh, L. Charles; Nicholson, Kelsey E.; Noble, Katherine; O'Fallon, Brendan D.; O'Shea, John M.; Pattison, David C.; Pedersen, Brent S.; Petersen, Brandy J.; Peterson, Bennet D.; Pizzo, Lucilla; Reynolds, Hayley M.; Rindler, Paul; Torr, Carrie B.; Wen, Ting; Yost, H. Joseph; Zhao, Jian; Yandell, Mark; Marth, Gabor T.; Quinlan, Aaron R.; Carey, John C.; Shayota, Brian J.; Tristani-Firouzi, Martin; Bonkowsky, Joshua L.
errShare
errSave
Identification of CNTN2 as a genetic modifier of PIGA-CDG in a family with incomplete penetrance and in Drosophila
errAMERICAN JOURNAL OF HUMAN GENETICS
IF8.1
err2025-02-01
err0
PREAI
errThorpe, Holly J.; Pedersen, Brent S.; Dietze, Miranda; Link, Nichole; Quinlan, Aaron R.; Bonkowsky, Joshua L.; Thomas, Ashley; Chow, Clement Y.
errShare
errSave
Improved characterization of 3′ single-cell RNA-seq libraries with paired-end avidity sequencing
errgenomics proteomics bioinformatics
IF2.8
err2024-12-18
err0
errOAAI
errChamberlin, John T.; Gillen, Austin E.; Quinlan, Aaron R.
errShare
errSave
Placental somatic mutation in human stillbirth and live birth: A pilot case-control study of paired placental, fetal, and maternal whole genomes
errPLACENTA
IF2.5
err2024-09-01
err0
PREAI
errWallace, Amelia D.; Blue, Nathan R.; Morgan, Terry; Workalemahu, Tsegaselassie; Silver, Robert M.; Quinlan, Aaron R.
errShare
errSave
Vcfexpress: flexible, rapid user-expressions to filter and format VCFs
errBIOINFORMATICS
IF5.4
err2024-03-03
err0
errOAAI
errPedersen, Brent S.; Quinlan, Aaron R.
errShare
errSave
Epistasis between mutator alleles contributes to germline mutation spectrum variability in laboratory mice
errELIFE
IF0
err2024-02-21
err2
errOAAI
errSasani, Thomas A.; Quinlan, Aaron R.; Harris, Kelley
errShare
errSave
Differences in molecular sampling and data processing explain variation among single-cell and single-nucleus RNA-seq experiments
errGENOME RESEARCH
IF5.5
err2024-02-14
err3
errOAAI
errChamberlin, John T.; Lee, Younghee; Marth, Gabor T.; Quinlan, Aaron R.
errShare
errSave
Effects of parental age and polymer composition on short tandem repeat de novo mutation rates
errGENETICS
IF5.1
err2024-01-31
err3
errOAAI
errGoldberg, Michael E.; Noyes, Michelle D.; Eichler, Evan E.; Quinlan, Aaron R.; Harris, Kelley
errShare
errSave
Characterization and visualization of tandem repeats at genome scale
errNATURE BIOTECHNOLOGY
IF41.7
err2024-01-02
err18
PREAI
errDolzhenko, Egor; English, Adam; Dashnow, Harriet; Brandine, Guilherme De Sena; Mokveld, Tom; Rowell, William J.; Karniski, Caitlin; Kronenberg, Zev; Danzi, Matt C.; Cheung, Warren A.; Bi, Chengpeng; Farrow, Emily; Wenger, Aaron; Chua, Khi Pin; Martinez-Cerdeno, Veronica; Bartley, Trevor D.; Jin, Peng; Nelson, David L.; Zuchner, Stephan; Pastinen, Tomi; Quinlan, Aaron R.; Sedlazeck, Fritz J.; Eberle, Michael A.
errShare
errSave
Genome sequencing of Pakistani families with male infertility identifies deleterious genotypes in SPAG6, CCDC9, TKTL1, TUBA3C, and M1AP
errANDROLOGY
IF3.4
err2023-12-10
err8
PREAI
errKhan, Muhammad Riaz; Akbari, Arvand; Nicholas, Thomas J.; Castillo-Madeen, Helen; Ajmal, Muhammad; Ul Haq, Taqweem; Laan, Maris; Quinlan, Aaron R.; Ahuja, Jasvinder S.; Shah, Aftab Ali; Conrad, Donald F.
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errSave
Random allelic expression in the adult human body
errCELL REPORTS
IF6.9
err2023-01-01
err13
errOAAI
errKravitz, Stephanie N.; Ferris, Elliott; Love, Michael I.; Thomas, Alun; Quinlan, Aaron R.; Gregg, Christopher
errShare
errSave
STRling: a k-mer counting approach that detects short tandem repeat expansions at known and novel loci
errGENOME BIOLOGY
IF9.4
err2022-12-14
err23
errOAAI
errDashnow, Harriet; Pedersen, Brent S.; Hiatt, Laurel; Brown, Joe; Beecroft, Sarah J.; Ravenscroft, Gianina; LaCroix, Amy J.; Lamont, Phillipa; Roxburgh, Richard H.; Rodrigues, Miriam J.; Davis, Mark; Mefford, Heather C.; Laing, Nigel G.; Quinlan, Aaron R.
errShare
errSave
Extensive Recombination-driven Coronavirus Diversification Expands the Pool of Potential Pandemic Pathogens
errGENOME BIOLOGY AND EVOLUTION
IF2.8
err2022-11-04
err15
errOAAI
errGoldstein, Stephen A.; Brown, Joe; Pedersen, Brent S.; Quinlan, Aaron R.; Elde, Nels C.
errShare
errSave
Integrating Precision Medicine into the Standard of Care for Male Infertility: What Will it Take?
errEUROPEAN UROLOGY
IF25.2
err2022-10-01
err3
errOAAI
errKunisaki, Jason; Quinlan, Aaron; Aston, Kenneth, I; Hotaling, James
errShare
errSave
Poxviruses capture host genes by LINE-1 retrotransposition
errELIFE
IF0
err2022-09-07
err17
errOAAI
errFixsen, Sarah M.; Cone, Kelsey R.; Goldstein, Stephen A.; Sasani, Thomas A.; Quinlan, Aaron R.; Rothenburg, Stefan; Elde, Nels C.
errShare
errSave

Research Directions

No research directions
Co-authors
Cooperation Journals
M
Mark J. Daly
H-index: 224 · Papers: 1.2K
P
Panos Deloukas
H-index: 197 · Papers: 764
E
Elaine R. Mardis
H-index: 197 · Papers: 1.7K
E
Evan E. Eichler
H-index: 191 · Papers: 864
R
Richard K. Wilson
H-index: 189 · Papers: 682
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