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M

Mihaela Zavolan

university of basel

76H-index
283Paper Count
3.6WCitation Count
Published Papers 139
Publication Date
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Regulation of mRNA poly(A) tail length governs mammalian body plan formation in gastruloids
errNature Communications
IF15.7
err2026-08-29
err0
errOAAI
errDavid Taborsky; Fabiola Valdivia-Francia; Pablo Serrano; Sukalp Muzumdar; Neguin Ranjbar; Laura Llop-Grau; Guillermo Tellez; Pjeter Gjonlleshaj; Clara Duré; Peter F. Renz; Ramona Weber; Merve Yigit; Umesh Ghoshdastider; Aleksei Mironov; Katie Hyams; Stefano Vianello; Mihaela Zavolan; Ori Bar-Nur; Matthias P. Lutolf; Ataman Sendoel
errShare
errSave
Histone H1 variants regulate neurodevelopmental transcriptional programs in autism with 16p11.2 deletion
errGenome Biology
IF9.4
err2026-05-21
err0
errOAAI
errRoni Brudno; Dan Askayo; Doha Khair; Ronna Shayevitch; Ifat Keydar; Michal Zmudjak-Olevson; Galit Lev-Maor; Mihaela Zavolan; Ran Elkon; Gil Ast
errShare
errSave
Heat shock induces silent ribosomes and reorganizes mRNA turnover
errCell Reports
IF6.9
err2025-10-17
err0
errOAAI
errSayanur Rahaman; Nicole Schiffelholz; Nitish Mittal; Klemens E. Fröhlich; Mihaela Zavolan; Attila Becskei
errShare
errSave
Multi-omic assessment of mRNA translation dynamics in liver cancer cell lines
errScientific Data
IF6.9
err2025-08-30
err0
errOAAI
errAsier González; Muskan Pandey; Niels Schlusser; Sayanur Rahaman; Meric Ataman; Nitish Mittal; Alexander Schmidt; Attila Becskei; Mihaela Zavolan
errShare
errSave
HTSinfer: inferring metadata from bulk Illumina RNA-Seq libraries
errBIOINFORMATICS
IF5.4
err2025-02-19
err0
errOAAI
errBalajti, Mate; Kandhari, Rohan; Juric, Boris; Zavolan, Mihaela; Kanitz, Alexander
errShare
errSave
PolyASite v3.0: a multi-species atlas of polyadenylation sites inferred from single-cell RNA-sequencing data
errNUCLEIC ACIDS RESEARCH
IF13.1
err2024-11-12
err0
errOAAI
errMoon, Youngbin; Herrmann, Christina J.; Mironov, Aleksei; Zavolan, Mihaela
errShare
errSave
Nuclear and cytosolic fractions of SOX2 synergize as transcriptional and translational co-regulators of cell fate
errCELL REPORTS
IF6.9
err2024-10-01
err0
errOAAI
errSchaefer, Thorsten; Mittal, Nitish; Wang, Hui; Ataman, Meric; Candido, Silvia; Lotscher, Jonas; Velychko, Sergiy; Tintignac, Lionel; Bock, Thomas; Borsch, Anastasiya; Bassler, Jochen; Rao, Tata Nageswara; Zmajkovic, Jakub; Roffeis, Sarah; Loliger, Jordan; Jacob, Francis; Dumlin, Alain; Schurch, Christoph; Schmidt, Alexander; Skoda, Radek C.; Wymann, Matthias P.; Hess, Christoph; Schoeler, Hans R.; Zaehres, Holm; Hurt, Ed; Zavolan, Mihaela; Lengerke, Claudia
errShare
errSave
Calorie restriction and rapamycin distinctly restore non-canonical ORF translation in the muscles of aging mice
errNPJ REGENERATIVE MEDICINE
IF6.5
err2024-09-19
err0
errOAAI
errMittal, Nitish; Ataman, Meric; Tintignac, Lionel; Ham, Daniel J.; Jorin, Lena; Schmidt, Alexander; Sinnreich, Michael; Ruegg, Markus A.; Zavolan, Mihaela
errShare
errSave
Current limitations in predicting mRNA translation with deep learning models
errGENOME BIOLOGY
IF9.4
err2024-08-20
err0
errOAAI
errSchlusser, Niels; Gonzalez, Asier; Pandey, Muskan; Zavolan, Mihaela
errShare
errSave
Leveraging multi-omics data to infer regulators of mRNA 3' end processing in glioblastoma
errFRONTIERS IN MOLECULAR BIOSCIENCES
IF4
err2024-08-12
err1
errOAAI
errMironov, Aleksei; Franchitti, Lorenzo; Ghosh, Shreemoyee; Ritz, Marie-Francoise; Hutter, Gregor; De Bortoli, Michele; Zavolan, Mihaela
errShare
errSave
Calorie restriction and rapamycin distinctly mitigate aging-associated protein phosphorylation changes in mouse muscles
errCOMMUNICATIONS BIOLOGY
IF5.1
err2024-08-10
err0
errOAAI
errAtaman, Meric; Mittal, Nitish; Tintignac, Lionel; Schmidt, Alexander; Ham, Daniel J.; Gonzalez, Asier; Ruegg, Markus A.; Zavolan, Mihaela
errShare
errSave
Ribosomal protein RPL39L is an efficiency factor in the cotranslational folding of a subset of proteins with alpha helical domains
errNUCLEIC ACIDS RESEARCH
IF13.1
err2024-07-23
err1
errOAAI
errBanerjee, Arka; Ataman, Meric; Smialek, Maciej Jerzy; Mookherjee, Debdatto; Rabl, Julius; Mironov, Aleksei; Mues, Lea; Enkler, Ludovic; Coto-Llerena, Mairene; Schmidt, Alexander; Boehringer, Daniel; Piscuoglio, Salvatore; Spang, Anne; Mittal, Nitish; Zavolan, Mihaela
errShare
errSave
CCAR1 promotes DNA repair via alternative splicing
errMOLECULAR CELL
IF16.6
err2024-07-01
err1
errOAAI
errKarasu, Mehmet E.; Jahnke, Leonard; Joseph, Brian J.; Amerzhanova, Yerkezhan; Mironov, Aleksei; Shu, Xuan; Schroder, Markus S.; Gvozdenovic, Ana; Sala, Irene; Zavolan, Mihaela; Jonas, Stefanie; Corn, Jacob E.
errShare
errSave
MAPP unravels frequent co-regulation of splicing and polyadenylation by RNA-binding proteins and their dysregulation in cancer
errNATURE COMMUNICATIONS
IF15.7
err2024-05-15
err3
errOAAI
errBak, Maciej; van Nimwegen, Erik; Kouzel, Ian U.; Gur, Tamer; Schmidt, Ralf; Zavolan, Mihaela; Gruber, Andreas J.
errShare
errSave
Redefining SOX2 as a bifunctional mediator of transcription and adjusted translation control
errCANCER RESEARCH
IF16.6
err2024-03-22
err0
PREAI
errMittal, Nitish; Ataman, Meric; Wang, Hui; Candido, Silvia; Lotscher, Jonas; Velychko, Sergiy; Tintignac, Lionel; Bock, Thomas; Borsch, Anastasiya; Bassler, Jochen; Rao, Tata Nageswara; Zmajkovic, Jakub; Roffeis, Sarah; Loliger, Jordan; Jacob, Francis; Dumlin, Alain; Schurch, Christoph; Schmidt, Alexander; Skoda, Radek C.; Hess, Christoph; Scholer, Hans R.; Zaehres, Holm; Hurt, Ed; Zavolan, Mihaela; Lengerke, Claudia; Schaefer, Thorsten
errShare
errSave
T helper cells exhibit a dynamic and reversible 3′-UTR landscape
errRNA
IF5
err2024-02-01
err1
errOAAI
errSeyres, Denis; Gorka, Oliver; Schmidt, Ralf; Marone, Romina; Zavolan, Mihaela; Jeker, Lukas T.
errShare
errSave
Extensible benchmarking of methods that identify and quantify polyadenylation sites from RNA-seq data
errRNA
IF5
err2023-10-10
err6
errOAAI
errBryce-Smith, Sam; Burri, Dominik; Gazzara, Matthew R.; Herrmann, Christina J.; Danecka, Weronika; Fitzsimmons, Christina M.; Wan, Yuk Kei; Zhuang, Farica; Fansler, Mervin M.; Fernandez, Jose M.; Ferret, Meritxell; Gonzalez-Uriarte, Asier; Haynes, Samuel; Herdman, Chelsea; Kanitz, Alexander; Katsantoni, Maria; Marini, Federico; McDonnel, Euan; Nicolet, Ben; Poon, Chi-Lam; Rot, Gregor; Scharfen, Leonard; Wu, Pin-Jou; Yoon, Yoseop; Barash, Yoseph; Zavolan, Mihaela
errShare
errSave
Identification of experimentally-supported poly(A) sites in single-cell RNA-seq data with SCINPAS
errgenomics proteomics bioinformatics
IF2.8
err2023-09-11
err4
errOAAI
errMoon, Youngbin; Burri, Dominik; Zavolan, Mihaela
errShare
errSave
Impaired age-associated mitochondrial translation is mitigated by exercise and PGC-1α
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2023-08-28
err7
errOAAI
errde Smalen, Laura M.; Borsch, Anastasiya; Leuchtmann, Aurel B.; Gill, Jonathan F.; Ritz, Danilo; Zavolan, Mihaela; Handschin, Christoph
errShare
errSave
Shortening of 3'UTRs in most cell types composing tumor tissues implicates alternative polyadenylation in protein metabolism (vol 27, 1459, 2021)
errRNA
IF5
err2023-05-16
err0
errOAAI
errBurri, Dominik; Zavolan, Mihaela
errShare
errSave

Research Directions

No research directions
Co-authors
Cooperation Journals
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Charles M. Rice
H-index: 166 · Papers: 718
S
Sarah A. Teichmann
H-index: 141 · Papers: 677
D
David Hume
H-index: 140 · Papers: 1.9K
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