Not logged in.png)
Share.png)
SaveShare Save Share Save Nanopore ReCappable sequencing maps SARS-CoV-2 5′ capping sites and provides new insights into the structure of sgRNAs
Ugolini, Camilla; Mulroney, Logan; Leger, Adrien; Castelli, Matteo; Criscuolo, Elena; Williamson, Maia Kavanagh; Davidson, Andrew D.; Almuqrin, Abdulaziz; Giambruno, Roberto; Jain, Miten; Frige, Gianmaria; Olsen, Hugh; Tzertzinis, George; Schildkraut, Ira; Wulf, Madalee G.; Correa, Ivan R.; Ettwiller, Laurence; Clementi, Nicola; Clementi, Massimo; Mancini, Nicasio; Birney, Ewan; Akeson, Mark; Nicassio, Francesco; Matthews, David A.; Leonardi, Tommaso Share Save Share Save Share Save A community challenge to evaluate RNA-seq, fusion detection, and isoform quantification methods for cancer discoveryCreason, Allison; Haan, David; Dang, Kristen; Chiotti, Kami E.; Inkman, Matthew; Lamb, Andrew; Yu, Thomas; Hu, Yin; Norman, Thea C.; Buchanan, Alex; van Baren, Marijke J.; Spangler, Ryan; Rollins, M. Rick; Spellman, Paul T.; Rozanov, Dmitri; Zhang, Jin; Maher, Christopher A.; Caloian, Cristian; Watson, John D.; Uhrig, Sebastian; Haas, Brian J.; Jain, Miten; Akeson, Mark; Ahsen, Mehmet Eren; Stolovitzky, Gustavo; Guinney, Justin; Boutros, Paul C.; Stuart, Joshua M.; Ellrott, Kyle Share Save Inflammation drives alternative first exon usage to regulate immune genes including a novel iron-regulated isoform of Aim2Robinson, Elektra K.; Jagannatha, Pratibha; Covarrubias, Sergio; Cattle, Matthew; Smaliy, Valeriya; Safavi, Rojin; Shapleigh, Barbara; Abu-Shumays, Robin; Jain, Miten; Cloonan, Suzanne M.; Akeson, Mark; Brooks, Angela N.; Carpenter, Susan Share Save miRNA-independent function of long noncoding pri-miRNA lociHe, Daniel; Wu, David; Muller, Soren; Wang, Lin; Saha, Parna; Ahanger, Sajad Hamid; Liu, Siyuan John; Cui, Miao; Hong, Sung Jun; Jain, Miten; Olson, Hugh E.; Akeson, Mark; Costello, Joseph F.; Diaz, Aaron; Lim, Daniel A. Share Save Nanopore sequencing and the Shasta toolkit enable efficient de novo assembly of eleven human genomesShafin, Kishwar; Pesout, Trevor; Lorig-Roach, Ryan; Haukness, Marina; Olsen, Hugh E.; Bosworth, Colleen; Armstrong, Joel; Tigyi, Kristof; Maurer, Nicholas; Koren, Sergey; Sedlazeck, Fritz J.; Marschall, Tobias; Mayes, Simon; Costa, Vania; Zook, Justin M.; Liu, Kelvin J.; Kilburn, Duncan; Sorensen, Melanie; Munson, Katy M.; Vollger, Mitchell R.; Monlong, Jean; Garrison, Erik; Eichler, Evan E.; Salama, Sofie; Haussler, David; Green, Richard E.; Akeson, Mark; Phillippy, Adam; Miga, Karen H.; Carnevali, Paolo; Jain, Miten; Paten, Benedict Share Save CRISPRi-based radiation modifier screen identifies long non-coding RNA therapeutic targets in gliomaLiu, S. John; Malatesta, Martina; Lien, Brian, V; Saha, Parna; Thombare, Shivani S.; Hong, Sung Jun; Pedraza, Leslie; Koontz, Mark; Seo, Kyounghee; Horlbeck, Max A.; He, Daniel; Birk, Harjus S.; Jain, Miten; Olsen, Hugh E.; Akeson, Mark; Weissman, Jonathan S.; Monje, Michelle; Gupta, Nalin; Raleigh, David R.; Ullian, Erik M.; Lim, Daniel A. Share Save Nanopore native RNA sequencing of a human poly(A) transcriptome (vol 16, pg, 1297, 2019)Workman, Rachael E.; Tang, Alison D.; Tang, Paul S.; Jain, Miten; Tyson, John R.; Razaghi, Roham; Zuzarte, Philip C.; Gilpatrick, Timothy; Payne, Alexander; Quick, Joshua; Sadowski, Norah; Holmes, Nadine; de Jesus, Jaqueline Goes; Jones, Karen L.; Soulette, Cameron M.; Snutch, Terrance P.; Loman, Nicholas; Paten, Benedict; Loose, Matthew; Simpson, Jared T.; Olsen, Hugh E.; Brooks, Angela N.; Akeson, Mark; Timp, Winston Share Save Nanopore native RNA sequencing of a human poly(A) transcriptomeWorkman, Rachael E.; Tang, Alison D.; Tang, Paul S.; Jain, Miten; Tyson, John R.; Razaghi, Roham; Zuzarte, Philip C.; Gilpatrick, Timothy; Payne, Alexander; Quick, Joshua; Sadowski, Norah; Holmes, Nadine; de Jesus, Jaqueline Goes; Jones, Karen L.; Soulette, Cameron M.; Snutch, Terrance P.; Loman, Nicholas; Paten, Benedict; Loose, Matthew; Simpson, Jared T.; Olsen, Hugh E.; Brooks, Angela N.; Akeson, Mark; Timp, Winston Share Save Linear assembly of a human centromere on the Y chromosomeJain, Miten; Olsen, Hugh E.; Turner, Daniel J.; Stoddart, David; Bulazel, Kira V.; Paten, Benedict; Haussler, David; Willard, Huntington F.; Akeson, Mark; Miga, Karen H. Share Save Nanopore long-read RNAseq reveals widespread transcriptional variation among the surface receptors of individual B cellsByrne, Ashley; Beaudin, Anna E.; Olsen, Hugh E.; Jain, Miten; Cole, Charles; Palmer, Theron; DuBois, Rebecca M.; Forsberg, E. Camilla; Akeson, Mark; Vollmers, Christopher Share Save Share Save Share Save Share Save Share Save Share Save 
.png){kind=icon}
.png){kind=icon}
.png){kind=icon}
.png){kind=icon}
.png){kind=icon}