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Arrate Muñoz‐Barrutia

universidad carlos ⅲ de madrid

27H-index
224Paper Count
5.0KCitation Count
Published Papers 65
Publication Date
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SAMJ: fast image annotation on ImageJ/Fiji via segment anything model
errNature Communications
IF15.7
err2026-06-18
err0
errOAAI
errCarlos García-López-de-Haro; Caterina Fuster-Barceló; Curtis T. Rueden; Jónathan Heras; Vladimír Ulman; Daniel Franco-Barranco; Adrián Inés; Kevin W. Eliceiri; Jean-Christophe Olivo-Marin; Jean-Yves Tinevez; Daniel Sage; Arrate Muñoz-Barrutia
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errSave
Quantitative sleep EEG identifies CSF core biomarker-related subgroups in Alzheimer’s disease
errGeroScience
IF5.4
err2026-06-06
err0
PREAI
errAnna Michela Gaeta; Lorena Gallego Viñarás; Ferran Barbé; Pablo Martínez Olmos; Arrate Muñoz-Barrutia; Gerard Piñol-Ripoll
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Roadmap on deep learning for microscopy
errjournal of physics: photonics
IF0
err2026-01-29
err0
errOAAI
errGiovanni Volpe; Carolina Wählby; Lei Tian; Michael Hecht; Artur Yakimovich; Kristina Monakhova; Laura Waller; Ivo F Sbalzarini; Christopher A Metzler; Mingyang Xie; Kevin Zhang; Isaac C D Lenton; Halina Rubinsztein-Dunlop; Daniel Brunner; Bijie Bai; Aydogan Ozcan; Daniel Midtvedt; Hao Wang; Tongyu Li; Nataša Sladoje; Joakim Lindblad; Jason T Smith; Marien Ochoa; Margarida Barroso; Xavier Intes; Tong Qiu; Li-Yu Yu; Sixian You; Yongtao Liu; Maxim A Ziatdinov; Sergei V Kalinin; Arlo Sheridan; Uri Manor; Elias Nehme; Ofri Goldenberg; Yoav Shechtman; Henrik K Moberg; Christoph Langhammer; Barbora Špačková; Saga Helgadottir; Benjamin Midtvedt; Aykut Argun; Tobias Thalheim; Frank Cichos; Stefano Bo; Lars Hubatsch; Jesus Pineda; Carlo Manzo; Harshith Bachimanchi; Erik Selander; Antoni Homs-Corbera; Martin Fränzl; Kevin de Haan; Yair Rivenson; Zofia Korczak; Caroline Beck Adiels; Mite Mijalkov; Dániel Veréb; Yu-Wei Chang; Joana B Pereira; Damian Matuszewski; Gustaf Kylberg; Ida-Maria Sintorn; Juan C Caicedo; Beth A Cimini; Muyinatu A Lediju Bell; Bruno M Saraiva; Guillaume Jacquemet; Ricardo Henriques; Wei Ouyang; Trang Le; Estibaliz Gómez-de-Mariscal; Daniel Sage; Arrate Muñoz-Barrutia; Ebba Josefson Lindqvist; Johanna Bergman
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In-depth 3D exploration of autosomal dominant polycystic kidney disease through light sheet fluorescence microscopy
errScientific Reports
IF3.9
err2025-11-19
err0
errOAAI
errPablo Delgado-Rodriguez; Itsaso Vitoria; Gonzalo R. Ríos-Muñoz; Lídia Bardia; Nicolás Lamanna-Rama; Laura Nicolas-Saenz; Jon Sporring; María L. Soto-Montenegro; Rafael Aldabe; Julien Colombelli; Arrate Muñoz-Barrutia
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Absolute Quantification and Spatial Mapping of Hyaluronic Acid in Histological Tissue Sections
errACS MEASUREMENT SCIENCE AU
IF9
err2025-11-01
err0
PREAI
errQuilez, Cristina; Gonzalez-Rico, Jorge; Lopez-Donaire, Maria Luisa; Gago-Lopez, Nuria; Munoz-Barrutia, Arrate; Velasco, Diego
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Horizontal Viscoelastic Focusing for Hyperspectral Microflow Cytometry
errBIOCHIP JOURNAL
IF6.1
err2025-05-05
err0
PREAI
errHyo Geun Yun; Yoel Alonso Cadierno; Sang Min Ki; Hyun Ji Lee; Arrate Muñoz-Barrutia; Daniel Garcia-Gonzalez; Jong-Min Lee; Sungyoung Choi
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errSave
BiaPy: accessible deep learning on bioimages
errNATURE METHODS
IF32.1
err2025-04-29
err0
PREAI
errFranco-Barranco, Daniel; Roman, Jesus A. Andres-San; Hidalgo-Cenalmor, Ivan; Backova, Lenka; Gonzalez-Marfil, Aitor; Caporal, Clement; Chessel, Anatole; Gomez-Galvez, Pedro; Escudero, Luis M.; Wei, Donglai; Munoz-Barrutia, Arrate; Arganda-Carreras, Ignacio
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The crucial role of bioimage analysts in scientific research and publication
errJOURNAL OF CELL SCIENCE
IF3.6
err2024-10-30
err1
errOAAI
errCimini, Beth A.; Bankhead, Peter; D'Antuono, Rocco; Fazeli, Elnaz; Fernandez-Rodriguez, Julia; Fuster-Barcelo, Caterina; Haase, Robert; Jambor, Helena Klara; Jones, Martin L.; Jug, Florian; Klemm, Anna H.; Kreshuk, Anna; Marcotti, Stefania; Martins, Gabriel G.; Mcardle, Sara; Miura, Kota; Munoz-Barrutia, Arrate; Murphy, Laura C.; Nelson, Michael S.; Norrelykke, Simon F.; Paul-Gilloteaux, Perrine; Pengo, Thomas; Pylvanainen, Joanna W.; Pytowski, Lior; Ravera, Arianna; Reinke, Annika; Rekik, Yousr; Strambio-De-Castillia, Caterina; Thedie, Daniel; Uhlmann, Virginie; Umney, Oliver; Wiggins, Laura; Eliceiri, Kevin W.
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Multiscale and multimodal evaluation of autosomal dominant polycystic kidney disease development
errCOMMUNICATIONS BIOLOGY
IF5.1
err2024-09-19
err0
errOAAI
errDelgado-Rodriguez, Pablo; Lamanna-Rama, Nicolas; Saande, Cassondra; Aldabe, Rafael; Soto-Montenegro, Maria L.; Munoz-Barrutia, Arrate
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errSave
BioImage.IO Chatbot: a community-driven AI assistant for integrative computational bioimaging
errNATURE METHODS
IF32.1
err2024-08-09
err2
PREAI
errLei, Wanlu; Fuster-Barcelo, Caterina; Reder, Gabriel; Munoz-Barrutia, Arrate; Ouyang, Wei
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errSave
Predicting Alzheimer's disease CSF core biomarkers: a multimodal Machine Learning approach
errFRONTIERS IN AGING NEUROSCIENCE
IF4.5
err2024-06-26
err5
errOAAI
errGaeta, Anna Michela; Quijada-Lopez, Maria; Barbe, Ferran; Vaca, Rafaela; Pujol, Montse; Minguez, Olga; Sanchez-de-la-Torre, Manuel; Munoz-Barrutia, Arrate; Pinol-Ripoll, Gerard
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Automatic classification of normal and abnormal cell division using deep learning
errSCIENTIFIC REPORTS
IF3.9
err2024-06-20
err3
errOAAI
errDelgado-Rodriguez, Pablo; Sanchez, Rodrigo Morales; Roumeas-Noel, Elouan; Paris, Francois; Munoz-Barrutia, Arrate
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errSave
Computational Hyperspectral Microflow Cytometry
errSMALL
IF12.1
err2024-05-21
err0
errOAAI
errYun, Hyo Geun; Cadierno, Yoel Alonso; Kim, Tae Won; Munoz-Barrutia, Arrate; Garica-Gonzalez, Daniel; Choi, Sungyoung
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errSave
Mechanical and Functional Responses in Astrocytes under Alternating Deformation Modes Using Magneto-Active Substrates
errADVANCED MATERIALS
IF26.8
err2024-04-21
err6
errOAAI
errGomez-Cruz, Clara; Fernandez-de la Torre, Miguel; Lachowski, Dariusz; Prados-de-Haro, Martin; Hernandez, Armando E. del Rio; Perea, Gertrudis; Munoz-Barrutia, Arrate; Garcia-Gonzalez, Daniel
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Three-dimensional immune atlas of pancreatic cancer precursor lesions reveals large inter- and intra-lesion heterogeneity
errCANCER RESEARCH
IF16.6
err2024-03-22
err0
PREAI
errKiemen, Ashley L.; Almagro-Perez, Cristina; Matos-Romero, Valentina; Braxton, Alicia M.; Mahesh-Babu, Jaanvi; Thompson, Elizabeth D.; Cornish, Toby C.; Wu, PeiHsun; Wood, Laura D.; Munoz-Barrutia, Arrate; Hruban, Ralph H.; Wirtz, Denis
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MLL1 regulates cytokine-driven cell migration and metastasis
errSCIENCE ADVANCES
IF12.5
err2024-03-15
err4
errOAAI
errNair, Praful R.; Danilova, Ludmila; Gomez-de-Mariscal, Estibaliz; Kim, Dongjoo; Fan, Rong; Munoz-Barrutia, Arrate; Fertig, Elana J.; Wirtz, Denis
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Tumor proliferation and invasion are intrinsically coupled and unraveled through tunable spheroid and physics-based models
errACTA BIOMATERIALIA
IF9.6
err2024-02-01
err2
errOAAI
errCrawford, Ashleigh J.; Gomez-Cruz, Clara; Russo, Gabriella C.; Huang, Wilson; Bhorkar, Isha; Roy, Triya; Munoz-Barrutia, Arrate; Wirtz, Denis; Garcia-Gonzalez, Daniel
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JDLL: a library to run deep learning models on Java bioimage informatics platforms
errNATURE METHODS
IF32.1
err2024-01-08
err1
errOAAI
errde Haro, Carlos Garcia Lopez; Dallongeville, Stephane; Musset, Thomas; Gomez-de-Mariscal, Estibaliz; Sage, Daniel; Ouyang, Wei; Munoz-Barrutia, Arrate; Tinevez, Jean-Yves; Olivo-Marin, Jean-Christophe
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From Nano to Macro An overview of the IEEE Bio Image and Signal Processing Technical Committee
errIEEE SIGNAL PROCESSING MAGAZINE
IF9.6
err2023-06-01
err2
errOAAI
errAviyente, Selin; Frangi, Alejandro F.; Meijering, Erik; Munoz-Barrutia, Arrate; Liebling, Michael; Van de Ville, Dimitri; Olivo-Marin, Jean-Christophe; Kovacevic, Jelena; Unser, Michael
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The Cell Tracking Challenge: 10 years of objective benchmarking
errNATURE METHODS
IF32.1
err2023-05-18
err37
errOAAI
errMaska, Martin; Ulman, Vladimir; Delgado-Rodriguez, Pablo; Gomez-de-Mariscal, Estibaliz; Necasova, Tereza; Pena, Fidel A. Guerrero; Ren, Tsang Ing; Meyerowitz, Elliot M.; Scherr, Tim; Loeffler, Katharina; Mikut, Ralf; Guo, Tianqi; Wang, Yin; Allebach, Jan P.; Bao, Rina; Al-Shakarji, Noor M.; Rahmon, Gani; Toubal, Imad Eddine; Palaniappan, Kannappan; Lux, Filip; Matula, Petr; Sugawara, Ko; Magnusson, Klas E. G.; Aho, Layton; Cohen, Andrew R.; Arbelle, Assaf; Ben-Haim, Tal; Raviv, Tammy Riklin; Isensee, Fabian; Jaeger, Paul F.; Maier-Hein, Klaus H.; Zhu, Yanming; Ederra, Cristina; Urbiola, Ainhoa; Meijering, Erik; Cunha, Alexandre; Munoz-Barrutia, Arrate; Kozubek, Michal; Ortiz-de-Solorzano, Carlos
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Research Directions

No research directions
Co-authors
Cooperation Journals
R
Ralph H. Hruban
H-index: 209 · Papers: 2.0K
D
Dinggang Shen
H-index: 143 · Papers: 2.1K
E
Elliot M. Meyerowitz
H-index: 125 · Papers: 355
J
J. Alfredo Martínéz
H-index: 124 · Papers: 1.7K
S
Sergei V. Kalinin
H-index: 109 · Papers: 1.6K
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