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Ricardo Henriques

Universidade de Lisboa

42H-index
187Paper Count
8.8KCitation Count
Published Papers 58
Publication Date
Roadmap on deep learning for microscopy
err2026-01-29
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errGiovanni Volpe; Carolina Wählby; Lei Tian; Michael Hecht; Artur Yakimovich; Kristina Monakhova; Laura Waller; Ivo F Sbalzarini; Christopher A Metzler; Mingyang Xie; Kevin Zhang; Isaac C D Lenton; Halina Rubinsztein-Dunlop; Daniel Brunner; Bijie Bai; Aydogan Ozcan; Daniel Midtvedt; Hao Wang; Tongyu Li; Nataša Sladoje; Joakim Lindblad; Jason T Smith; Marien Ochoa; Margarida Barroso; Xavier Intes; Tong Qiu; Li-Yu Yu; Sixian You; Yongtao Liu; Maxim A Ziatdinov; Sergei V Kalinin; Arlo Sheridan; Uri Manor; Elias Nehme; Ofri Goldenberg; Yoav Shechtman; Henrik K Moberg; Christoph Langhammer; Barbora Špačková; Saga Helgadottir; Benjamin Midtvedt; Aykut Argun; Tobias Thalheim; Frank Cichos; Stefano Bo; Lars Hubatsch; Jesus Pineda; Carlo Manzo; Harshith Bachimanchi; Erik Selander; Antoni Homs-Corbera; Martin Fränzl; Kevin de Haan; Yair Rivenson; Zofia Korczak; Caroline Beck Adiels; Mite Mijalkov; Dániel Veréb; Yu-Wei Chang; Joana B Pereira; Damian Matuszewski; Gustaf Kylberg; Ida-Maria Sintorn; Juan C Caicedo; Beth A Cimini; Muyinatu A Lediju Bell; Bruno M Saraiva; Guillaume Jacquemet; Ricardo Henriques; Wei Ouyang; Trang Le; Estibaliz Gómez-de-Mariscal; Daniel Sage; Arrate Muñoz-Barrutia; Ebba Josefson Lindqvist; Johanna Bergman
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PhotoFiTT: a quantitative framework for assessing phototoxicity in live-cell microscopy experiments
err2025-12-13
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errMario Del Rosario; Estibaliz Gómez-de-Mariscal; Leonor Morgado; Raquel Portela; Guillaume Jacquemet; Pedro M. Pereira; Ricardo Henriques
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Ultrasound-guided PRP for coracoid syndrome: a novel case of conjoint tendon enthesopathy
err2025-11-01
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PREAI
errRibeiro Da Silva, Tomas; Gaspar Silva, Bernardo; Da Costa, Jose Esteves; Ferreira-Silva, Nuno; Kubrova, Eva; Henriques, Ricardo; Hurdle, Mark Friedrich B.
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Nano-org, a functional resource for single-molecule localisation microscopy data
err2025-09-30
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errS. Shirgill; D. J. Nieves; J. A. Pike; M. A. Ahmed; H. Abbott; M. H. H. Baragilly; K. Savoye; J. D. Worboys; K. S. Hazime; E. Bruggeman; A. Garcia; D. J. Williamson; P. Rubin-Delanchy; R. Peters; D. M. Davis; R. Henriques; S. F. Lee; D. M. Owen
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Expansion and fluctuations-enhanced microscopy for nanoscale molecular profiling of cells and tissues
err2025-07-02
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PREAI
errDominik Kylies; Hannah S. Heil; Arturo G. Vesga; Mario Del Rosario; Maria Schwerk; Malte Kuehl; Milagros N. Wong; Victor G. Puelles; Ricardo Henriques
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Nanoscale imaging of biological systems via expansion and super-resolution microscopy
err2025-04-25
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errAristova, Daria; Kylies, Dominik; Del Rosario, Mario; Heil, Hannah S.; Schwerk, Maria; Kuehl, Malte; Wong, Milagros N.; Henriques, Ricardo; Puelles, Victor G.
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The nucleoid of rapidly growing Escherichia coli localizes close to the inner membrane and is organized by transcription, translation, and cell geometry
err2025-04-20
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errSpahn, Christoph; Middlemiss, Stuart; Gomez-de-Mariscal, Estibaliz; Henriques, Ricardo; Bode, Helge B.; Holden, Seamus
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DL4MicEverywhere: deep learning for microscopy made flexible, shareable and reproducible
err2024-05-17
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PREAI
errHidalgo-Cenalmor, Ivan; Pylvanainen, Joanna W.; Ferreira, Mariana G.; Russell, Craig T.; Saguy, Alon; Arganda-Carreras, Ignacio; Shechtman, Yoav; Jacquemet, Guillaume; Henriques, Ricardo; Gomez-de-Mariscal, Estibaliz
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Harnessing artificial intelligence to reduce phototoxicity in live imaging
err2024-02-07
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errGomez-de-Mariscal, Estibaliz; Del Rosario, Mario; Pylvanainen, Joanna W.; Jacquemet, Guillaume; Henriques, Ricardo
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Live-cell imaging in the deep learning era
err2023-12-01
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errPylvanainen, Joanna W.; Gomez-de-Mariscal, Estibaliz; Henriques, Ricardo; Jacquemet, Guillaume
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High-fidelity 3D live-cell nanoscopy through data-driven enhanced super-resolution radial fluctuation
err2023-11-13
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errLaine, Romain F.; Heil, Hannah S.; Coelho, Simao; Nixon-Abell, Jonathon; Jimenez, Angelique; Wiesner, Theresa; Martinez, Damian; Galgani, Tommaso; Regnier, Louise; Stubb, Aki; Follain, Gautier; Webster, Samantha; Goyette, Jesse; Dauphin, Aurelien; Salles, Audrey; Culley, Sian; Jacquemet, Guillaume; Hajj, Bassam; Leterrier, Christophe; Henriques, Ricardo
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Fast4DReg-fast registration of 4D microscopy datasets
err2023-02-23
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errPylvanainen, Joanna W.; Laine, Romain F.; Saraiva, Bruno M. S.; Ghimire, Sujan; Follain, Gautier; Henriques, Ricardo; Jacquemet, Guillaume
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Trimethine Cyanine Dyes as NA-Sensitive Probes for Visualization of Cell Compartments in Fluorescence Microscopy
err2022-12-13
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errAristova, Daria; Selin, Roman; Heil, Hannah Sophie; Kosach, Viktoriia; Slominsky, Yuriy; Yarmoluk, Sergiy; Pekhnyo, Vasyl; Kovalska, Vladyslava; Henriques, Ricardo; Mokhir, Andriy; Chernii, Svitlana
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The LEGO® brick road to open science and biotechnology
err2022-09-01
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PREAI
errBoulter, Etienne; Colombelli, Julien; Henriques, Ricardo; Feral, Chloe C.
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DeepBacs for multi-task bacterial image analysis using open-source deep learning approaches
err2022-07-09
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errSpahn, Christoph; Gomez-de-Mariscal, Estibaliz; Laine, Romain F.; Pereira, Pedro M.; von Chamier, Lucas; Conduit, Mia; Pinho, Mariana G.; Jacquemet, Guillaume; Holden, Seamus; Heilemann, Mike; Henriques, Ricardo
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Nanoscale Colocalization of NK Cell Activating and Inhibitory Receptors Controls Signal Integration
err2022-06-01
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errTomaz, David; Pereira, Pedro Matos; Guerra, Nadia; Dyson, Julian; Gould, Keith; Henriques, Ricardo
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Physical mechanisms of ESCRT-III-driven cell division
err2022-01-04
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errHarker-Kirschneck, Lena; Hafner, Anne E.; Yao, Tina; Vanhille-Campos, Christian; Jiang, Xiuyun; Pulschen, Andre; Hurtig, Fredrik; Hryniuk, Dawid; Culley, Sian; Henriques, Ricardo; Baum, Buzz; Saric, Andela
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The Field Guide to 3D Printing in Optical Microscopy for Life Sciences
err2021-10-24
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errDel Rosario, Mario; Heil, Hannah S.; Mendes, Afonso; Saggiomo, Vittorio; Henriques, Ricardo
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Avoiding a replication crisis in deep-learning-based bioimage analysis
err2021-10-04
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errLaine, Romain F.; Arganda-Carreras, Ignacio; Henriques, Ricardo; Jacquemet, Guillaume
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FtsZ treadmilling is essential for Z-ring condensation and septal constriction initiation in Bacillus subtilis cell division
err2021-04-27
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errWhitley, Kevin D.; Jukes, Calum; Tregidgo, Nicholas; Karinou, Eleni; Almada, Pedro; Cesbron, Yann; Henriques, Ricardo; Dekker, Cees; Holden, Seamus
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