logo
CanyamAI summaries for academic research
language
MobileMobile
  • Phone FeatureWeChat Mini Program
EnglishEnglish
noticeNotice
BlogBlog
delete
arrow
Back
R

Robert J. Chalkley

university of california

49H-index
153Paper Count
1.0WCitation Count
Published Papers 89
Publication Date
logo
Extracellular matrix proteolysis maintains synapse plasticity during brain development
errNature Neuroscience
IF20
err2025-12-22
err0
errOAAI
errHaruna Nakajo; Ran Cao; Supriya A. Mula; Justin McKetney; Nicholas J. Silva; Kathy H. Li; Robert J. Chalkley; Lisa K. Randolph; Muskaan Shah; Indigo V. L. Rose; Martin Kampmann; Danielle L. Swaney; Christoph Kirst; Anna V. Molofsky
errShare
errSave
Identification of the peptide Vulnusin, a wound signal that mediates mechanical-injury-induced nociception in Drosophila
errNeuron
IF15
err2025-10-03
err0
errOAAI
errYanmeng Guo; Tun Li; Sami T. Tuomivaara; Chin Fen Teo; Shengjie Feng; Robert J. Chalkley; Ruijun Zhu; Tong Cheng; Kathy H. Li; Wei Chen; Avi Simon; Peng Jin; Susan Younger; Adeline J.H. Yong; Kai Li; Kexin Li; Alma L. Burlingame; Lily Yeh Jan; Yuh Nung Jan
errShare
errSave
Can protein expression be ‘solved’?
errTrends in Biotechnology
IF14.9
err2025-06-02
err0
errOAAI
errCatherine Baranowski; Hector Garcia Martin; Diego A. Oyarzún; Aviv Spinner; Bijoy Desai; Christopher J. Petzold; Evangelos-Marios Nikolados; Sebastian Jaaks-Kraatz; Aljaž Gaber; Robert J. Chalkley; Devin Scannell; Rachel Sevey; Michael C. Jewett; Peter J. Kelly; Erika A. DeBenedictis
errShare
errSave
Comparative analysis of glycoproteomic software using a tailored glycan database
errANALYTICAL AND BIOANALYTICAL CHEMISTRY
IF3.8
err2025-03-01
err0
errOAAI
errHogan, Reuben A.; Pepi, Lauren E.; Riley, Nicholas M.; Chalkley, Robert J.
errShare
errSave
Improving the Depth and Reliability of Glycopeptide Identification Using Protein Prospector
errMOLECULAR & CELLULAR PROTEOMICS
IF5.5
err2025-02-01
err0
PREAI
errChalkley, Robert J.; Baker, Peter R.
errShare
errSave
Phosphorylation-driven epichaperome assembly is a regulator of cellular adaptability and proliferation
errNATURE COMMUNICATIONS
IF15.7
err2024-10-16
err0
errOAAI
errRoychowdhury, Tanaya; McNutt, Seth W.; Pasala, Chiranjeevi; Nguyen, Hieu T.; Thornton, Daniel T.; Sharma, Sahil; Botticelli, Luke; Digwal, Chander S.; Joshi, Suhasini; Yang, Nan; Panchal, Palak; Chakrabarty, Souparna; Bay, Sadik; Markov, Vladimir; Kwong, Charlene; Lisanti, Jeanine; Chung, Sun Young; Ginsberg, Stephen D.; Yan, Pengrong; De Stanchina, Elisa; Corben, Adriana; Modi, Shanu; Alpaugh, Mary L.; Colombo, Giorgio; Erdjument-Bromage, Hediye; Neubert, Thomas A.; Chalkley, Robert J.; Baker, Peter R.; Burlingame, Alma L.; Rodina, Anna; Chiosis, Gabriela; Chu, Feixia
errShare
errSave
A Legionella toxin exhibits tRNA mimicry and glycosyl transferase activity to target the translation machinery and trigger a ribotoxic stress response
errNATURE CELL BIOLOGY
IF19.1
err2023-10-19
err11
errOAAI
errSubramanian, Advait; Wang, Lan; Moss, Tom; Voorhies, Mark; Sangwan, Smriti; Stevenson, Erica; Pulido, Ernst H.; Kwok, Samentha; Chalkley, Robert J.; Li, Kathy H.; Krogan, Nevan J.; Swaney, Danielle L.; Burlingame, Alma L.; Floor, Stephen N.; Sil, Anita; Walter, Peter; Mukherjee, Shaeri
errShare
errSave
Chemical Genetic Identification of PKC Epsilon Substrates in Mouse Brain
errMOLECULAR & CELLULAR PROTEOMICS
IF5.5
err2023-04-01
err2
errOAAI
errDugan, Michael P.; Ferguson, Laura B.; Hertz, Nicholas T.; Chalkley, Robert J.; Burlingame, Alma L.; Shokat, Kevan M.; Parker, Peter J.; Messing, Robert O.
errShare
errSave
The RasGAP Proteins Ira2 and Neurofibromin Are Negatively Regulated by Gpb1 in Yeast and ETEA in Humans
errMOLECULAR AND CELLULAR BIOLOGY
IF2.7
err2023-03-20
err57
errOAAI
errPhan, Vernon T.; Ding, Vivianne W.; Li, Fenglei; Chalkley, Robert J.; Burlingame, Alma; McCormick, Frank
errShare
errSave
Capture, Release, and Identification of Newly Synthesized Proteins for Improved Profiling of Functional Translatomes
errMOLECULAR & CELLULAR PROTEOMICS
IF5.5
err2023-03-01
err1
errOAAI
errPhillips, Nancy J.; Vinaithirthan, Bala M.; Oses-Prieto, Juan A.; Chalkley, Robert J.; Burlingame, Alma L.
errShare
errSave
SPINDLY mediates O-fucosylation of hundreds of proteins and sugar-dependent growth in Arabidopsis
errPLANT CELL
IF11.6
err2023-02-06
err13
errOAAI
errBi, Yang; Shrestha, Ruben; Zhang, Zhenzhen; Hsu, Chuan-Chih; Reyes, Andres, V; Karunadasa, Sumudu; Baker, Peter R.; Maynard, Jason C.; Liu, Yang; Hakimi, Amirmansoor; Lopez-Ferrer, Daniel; Hassan, Tahmid; Chalkley, Robert J.; Xu, Shou-Ling; Wang, Zhi-Yong
errShare
errSave
Revealing the nascent proteome by selective labeling, high-sensitivity capture, and mass spectrometry
errJOURNAL OF BIOLOGICAL CHEMISTRY
IF3.9
err2023-01-01
err0
errOAAI
errPhillips, Nancy; Vinaithirthan, Bala; Oses-Prieto, Juan; Chalkley, Robert; Burlingame, Alma
errShare
errSave
Application of Parallel Reaction Monitoring in 15N Labeled Samples for Quantification
errFRONTIERS IN PLANT SCIENCE
IF4.8
err2022-05-03
err1
errOAAI
errReyes, Andres V.; Shrestha, Ruben; Baker, Peter R.; Chalkley, Robert J.; Xu, Shou-Ling
errShare
errSave
15N Metabolic Labeling Quantification Workflow in Arabidopsis Using Protein Prospector
errFRONTIERS IN PLANT SCIENCE
IF4.8
err2022-02-15
err8
errOAAI
errShrestha, Ruben; Reyes, Andres V.; Baker, Peter R.; Wang, Zhi-Yong; Chalkley, Robert J.; Xu, Shou-Ling
errShare
errSave
Modulating environmental signals to reveal mechanisms and vulnerabilities of cancer persisters
errSCIENCE ADVANCES
IF12.5
err2022-01-28
err3
errOAAI
errSun, Xiaoxiao; Bieber, Jake M.; Hammerlindl, Heinz; Chalkley, Robert J.; Li, Kathy H.; Burlingame, Alma L.; Jacobson, Matthew P.; Wu, Lani F.; Altschuler, Steven J.
errShare
errSave
Community evaluation of glycoproteomics informatics solutions reveals high-performance search strategies for serum glycopeptide analysis (vol 18, pg 1304, 2021)
errNATURE METHODS
IF32.1
err2021-12-10
err0
errOAAI
errKawahara, Rebeca; Chernykh, Anastasia; Alagesan, Kathirvel; Bern, Marshall; Cao, Weiqian; Chalkley, Robert J.; Cheng, Kai; Choo, Matthew S.; Edwards, Nathan; Goldman, Radoslav; Hoffmann, Marcus; Hu, Yingwei; Huang, Yifan; Kim, Jin Young; Kletter, Doron; Liquet, Benoit; Liu, Mingqi; Mechref, Yehia; Meng, Bo; Neelamegham, Sriram; Nguyen-Khuong, Terry; Nilsson, Jonas; Pap, Adam; Park, Gun Wook; Parker, Benjamin L.; Pegg, Cassandra L.; Penninger, Josef M.; Phung, Toan K.; Pioch, Markus; Rapp, Erdmann; Sakalli, Enes; Sanda, Miloslav; Schulz, Benjamin L.; Scott, Nichollas E.; Sofronov, Georgy; Stadlmann, Johannes; Vakhrushev, Sergey Y.; Woo, Christina M.; Wu, Hung-Yi; Yang, Pengyuan; Ying, Wantao; Zhang, Hui; Zhang, Yong; Zhao, Jingfu; Zaia, Joseph; Haslam, Stuart M.; Palmisano, Giuseppe; Yoo, Jong Shin; Larson, Goran; Khoo, Kai-Hooi; Medzihradszky, Katalin F.; Kolarich, Daniel; Packer, Nicolle H.; Thaysen-Andersen, Morten
errShare
errSave
Community evaluation of glycoproteomics informatics solutions reveals high-performance search strategies for serum glycopeptide analysis
errNATURE METHODS
IF32.1
err2021-11-01
err84
errOAAI
errKawahara, Rebeca; Chernykh, Anastasia; Alagesan, Kathirvel; Bern, Marshall; Cao, Weiqian; Chalkley, Robert J.; Cheng, Kai; Choo, Matthew S.; Edwards, Nathan; Goldman, Radoslav; Hoffmann, Marcus; Hu, Yingwei; Huang, Yifan; Kim, Jin Young; Kletter, Doron; Liquet, Benoit; Liu, Mingqi; Mechref, Yehia; Meng, Bo; Neelamegham, Sriram; Nguyen-Khuong, Terry; Nilsson, Jonas; Pap, Adam; Park, Gun Wook; Parker, Benjamin L.; Pegg, Cassandra L.; Penninger, Josef M.; Phung, Toan K.; Pioch, Markus; Rapp, Erdmann; Sakalli, Enes; Sanda, Miloslav; Schulz, Benjamin L.; Scott, Nichollas E.; Sofronov, Georgy; Stadlmann, Johannes; Vakhrushev, Sergey Y.; Woo, Christina M.; Wu, Hung-Yi; Yang, Pengyuan; Ying, Wantao; Zhang, Hui; Zhang, Yong; Zhao, Jingfu; Zaia, Joseph; Haslam, Stuart M.; Palmisano, Giuseppe; Yoo, Jong Shin; Larson, Goran; Khoo, Kai-Hooi; Medzihradszky, Katalin F.; Kolarich, Daniel; Packer, Nicolle H.; Thaysen-Andersen, Morten
errShare
errSave
Methods for Enrichment and Assignment of N-Acetylglucosamine Modification Sites
errMOLECULAR & CELLULAR PROTEOMICS
IF5.5
err2021-01-01
err28
errOAAI
errMaynard, Jason C.; Chalkley, Robert J.
errShare
errSave
Proteomic analysis of platelet-rich and platelet-poor plasma
errREGENERATIVE THERAPY
IF3.5
err2020-12-01
err22
errOAAI
errMiroshnychenko, Olga; Chalkley, Robert J.; Leib, Ryan D.; Everts, Peter A.; Dragoo, Jason L.
errShare
errSave
Characterization of Prenylated C-terminal Peptides Using a Thiopropyl-based Capture Technique and LC-MS/MS
errMOLECULAR & CELLULAR PROTEOMICS
IF5.5
err2020-06-01
err6
errOAAI
errWilkins, James A.; Kaasik, Krista; Chalkley, Robert J.; Burlingame, Alma L.
errShare
errSave

Research Directions

No research directions
Co-authors
Cooperation Journals
M
M Snyder
H-index: 210 · Papers: 3.3K
J
John R. Yates
H-index: 188 · Papers: 1.5K
J
Josef Penninger
H-index: 174 · Papers: 1.6K
L
Lily Yeh Jan
H-index: 170 · Papers: 599
M
Michael A. Matthay
H-index: 169 · Papers: 1.3K
View more