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Z

Zechen Chong

University of Alabama

49H-index
185Paper Count
4.3WCitation Count
Published Papers 42
Publication Date
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Author Correction: Complex genetic variation in nearly complete human genomes
errNature
IF48.5
err2025-08-26
err0
errOAAI
errGlennis A. Logsdon; Peter Ebert; Peter A. Audano; Mark Loftus; David Porubsky; Jana Ebler; Feyza Yilmaz; Pille Hallast; Timofey Prodanov; DongAhn Yoo; Carolyn A. Paisie; William T. Harvey; Xuefang Zhao; Gianni V. Martino; Mir Henglin; Katherine M. Munson; Keon Rabbani; Chen-Shan Chin; Bida Gu; Hufsah Ashraf; Stephan Scholz; Olanrewaju Austine-Orimoloye; Parithi Balachandran; Marc Jan Bonder; Haoyu Cheng; Zechen Chong; Jonathan Crabtree; Mark Gerstein; Lisbeth A. Guethlein; Patrick Hasenfeld; Glenn Hickey; Kendra Hoekzema; Sarah E. Hunt; Matthew Jensen; Yunzhe Jiang; Sergey Koren; Youngjun Kwon; Chong Li; Heng Li; Jiaqi Li; Paul J. Norman; Keisuke K. Oshima; Benedict Paten; Adam M. Phillippy; Nicholas R. Pollock; Tobias Rausch; Mikko Rautiainen; Yuwei Song; Arda Söylev; Arvis Sulovari; Likhitha Surapaneni; Vasiliki Tsapalou; Weichen Zhou; Ying Zhou; Qihui Zhu; Michael C. Zody; Ryan E. Mills; Scott E. Devine; Xinghua Shi; Michael E. Talkowski; Mark J. P. Chaisson; Alexander T. Dilthey; Miriam K. Konkel; Jan O. Korbel; Charles Lee; Christine R. Beck; Evan E. Eichler; Tobias Marschall
errShare
errSave
Complex genetic variation in nearly complete human genomes
errNature
IF48.5
err2025-07-23
err0
errOAAI
errGlennis A. Logsdon; Peter Ebert; Peter A. Audano; Mark Loftus; David Porubsky; Jana Ebler; Feyza Yilmaz; Pille Hallast; Timofey Prodanov; DongAhn Yoo; Carolyn A. Paisie; William T. Harvey; Xuefang Zhao; Gianni V. Martino; Mir Henglin; Katherine M. Munson; Keon Rabbani; Chen-Shan Chin; Bida Gu; Hufsah Ashraf; Stephan Scholz; Olanrewaju Austine-Orimoloye; Parithi Balachandran; Marc Jan Bonder; Haoyu Cheng; Zechen Chong; Jonathan Crabtree; Mark Gerstein; Lisbeth A. Guethlein; Patrick Hasenfeld; Glenn Hickey; Kendra Hoekzema; Sarah E. Hunt; Matthew Jensen; Yunzhe Jiang; Sergey Koren; Youngjun Kwon; Chong Li; Heng Li; Jiaqi Li; Paul J. Norman; Keisuke K. Oshima; Benedict Paten; Adam M. Phillippy; Nicholas R. Pollock; Tobias Rausch; Mikko Rautiainen; Yuwei Song; Arda Söylev; Arvis Sulovari; Likhitha Surapaneni; Vasiliki Tsapalou; Weichen Zhou; Ying Zhou; Qihui Zhu; Michael C. Zody; Ryan E. Mills; Scott E. Devine; Xinghua Shi; Michael E. Talkowski; Mark J. P. Chaisson; Alexander T. Dilthey; Miriam K. Konkel; Jan O. Korbel; Charles Lee; Christine R. Beck; Evan E. Eichler; Tobias Marschall
errShare
errSave
Age- and ApoE Genotype-Dependent Transcriptomic Responses to O3 in the Hippocampus of Mice
errINTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
IF4.9
err2025-03-07
err0
errOAAI
errNakamya, Mary F.; Hu, Kaili; Jiang, Chunsun; Chong, Zechen; Liu, Rui-Ming
errShare
errSave
Endoluminal Biopsy for Vein of Galen Malformation
errNEUROSURGERY
IF3.9
err2024-05-15
err0
errOAAI
errHale, Andrew T.; Liu, Shanrun; Huang, Fengyuan; Song, Yuwei; Crowley, Michael R.; Crossman, David K.; Caudill, Caroline; Arynchyna-Smith, Anastasia; Chapman, Lindsey; Feldman, Michael J.; Saccomano, Benjamin W.; Rocque, Brandon G.; Rozzelle, Curtis J.; Blount, Jeffrey P.; Johnston, James M.; Chong, Zechen; Jones, Jesse G.
errShare
errSave
Molecular differentiation between complete and incomplete responders to neoadjuvant therapy in rectal cancer
errCANCER RESEARCH
IF16.6
err2024-03-22
err0
PREAI
errHuang, Fengyuan; McLeod, M. Chandler; Irwin, Regina Kay; Smithson, Mary; Yue, Zongliang; Gao, Min; Hardiman, Karin M.; Chong, Zechen
errShare
errSave
The genetic basis of hydrocephalus: genes, pathways, mechanisms, and global impact
errFLUIDS AND BARRIERS OF THE CNS
IF6.2
err2024-03-04
err2
errOAAI
errHale, Andrew T.; Boudreau, Hunter; Devulapalli, Rishi; Duy, Phan Q.; Atchley, Travis J.; Dewan, Michael C.; Goolam, Mubeen; Fieggen, Graham; Spader, Heather L.; Smith, Anastasia A.; Blount, Jeffrey P.; Johnston, James M.; Rocque, Brandon G.; Rozzelle, Curtis J.; Chong, Zechen; Strahle, Jennifer M.; Schiff, Steven J.; Kahle, Kristopher T.
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errSave
Body Weight Correlates with Molecular Variances in Patients with Cancer
errCANCER RESEARCH
IF16.6
err2024-01-08
err1
errOAAI
errHuang, Fengyuan; Xu, Peng; Yue, Zongliang; Song, Yuwei; Hu, Kaili; Zhao, Xinyang; Gao, Min; Chong, Zechen
errShare
errSave
Selective suppression of melanoma lacking IFN-γ pathway by JAK inhibition depends on T cells and host TNF signaling
errCANCER RESEARCH
IF16.6
err2023-04-04
err0
PREAI
errShen, Hongxing; Huang, Fengyuan; Zhang, Xiangmin; Ojo, Oluwagbemiga A.; Li, Yuebin; Trummell, Hoa Quang; Anderson, Joshua C.; Fiveash, John; Bredel, Markus; Yang, Eddy; Willey, Christopher; Chong, Zechen; Bonner, James; Shi, Lewis Z.
errShare
errSave
Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotransposition (vol 52, pg 306, 2020)
errNATURE GENETICS
IF31.8
err2023-03-21
err1
errOAAI
errRodriguez-Martin, Bernardo; Alvarez, Eva G.; Baez-Ortega, Adrian; Zamora, Jorge; Supek, Fran; Demeulemeester, Jonas; Santamarina, Martin; Ju, Young Seok; Temes, Javier; Garcia-Souto, Daniel; Detering, Harald; Li, Yilong; Rodriguez-Castro, Jorge; Dueso-Barroso, Ana; Bruzos, Alicia L.; Dentro, Stefan C.; Blanco, Miguel G.; Contino, Gianmarco; Ardeljan, Daniel; Tojo, Marta; Roberts, Nicola D.; Zumalave, Sonia; Edwards, Paul A.; Weischenfeldt, Joachim; Puiggros, Montserrat; Chong, Zechen; Chen, Ken; Lee, Eunjung Alice; Wala, Jeremiah A.; Raine, Keiran M.; Butler, Adam; Waszak, Sebastian M.; Navarro, Fabio C. P.; Schumacher, Steven E.; Monlong, Jean; Maura, Francesco; Bolli, Niccolo; Bourque, Guillaume; Gerstein, Mark; Park, Peter J.; Wedge, David C.; Beroukhim, Rameen; Torrents, David; Korbel, Jan O.; Martincorena, Inigo; Fitzgerald, Rebecca C.; Van Loo, Peter; Kazazian, Haig H.; Burns, Kathleen H.; Campbell, Peter J.; Tubio, Jose M. C.
errShare
errSave
Deciphering the exact breakpoints of structural variations using long sequencing reads with DeBreak
errNATURE COMMUNICATIONS
IF15.7
err2023-01-17
err20
errOAAI
errChen, Yu; Wang, Amy Y.; Barkley, Courtney A.; Zhang, Yixin; Zhao, Xinyang; Gao, Min; Edmonds, Mick D.; Chong, Zechen
errShare
errSave
Protein arginine methyltransferase 1 in the generation of immune megakaryocytes: A perspective review
errJOURNAL OF BIOLOGICAL CHEMISTRY
IF3.9
err2022-11-01
err5
errOAAI
errZhao, Xinyan; Chong, Zechen; Chen, Yabing; Zheng, X. Long; Wang, Qian-Fei; Li, Yueying
errShare
errSave
Gene Fusion Detection and Characterization in Long-Read Cancer Transcriptome Sequencing Data with FusionSeeker
errCANCER RESEARCH
IF16.6
err2022-11-01
err11
errOAAI
errChen, Yu; Wang, Yiqing; Chen, Weisheng; Tan, Zhengzhi; Song, Yuwei; Chen, Herbert; Chong, Zechen
errShare
errSave
Selective suppression of melanoma lacking IFN-γ pathway by JAK inhibition depends on T cells and host TNF signaling
errNATURE COMMUNICATIONS
IF15.7
err2022-08-25
err14
errOAAI
errShen, Hongxing; Huang, Fengyuan; Zhang, Xiangmin; Ojo, Oluwagbemiga A.; Li, Yuebin; Trummell, Hoa Quang; Anderson, Joshua C.; Fiveash, John; Bredel, Markus; Yang, Eddy S.; Willey, Christopher D.; Chong, Zechen; Bonner, James A.; Shi, Lewis Zhichang
errShare
errSave
Reduced sister chromatid cohesion acts as a tumor penetrance modifier
errPLOS GENETICS
IF3.7
err2022-08-22
err4
errOAAI
errWang, Jun; Thomas, Holly R.; Chen, Yu; Percival, Stefanie M.; Waldrep, Stephanie C.; Ramaker, Ryne C.; Thompson, Robert G.; Cooper, Sara J.; Chong, Zechen; Parant, John M.
errShare
errSave
Multiple resistance mechanisms identified via Single-cell RNAseq in patient derived xenograft model of rectal cancer during treatment
errCANCER RESEARCH
IF16.6
err2022-05-15
err0
PREAI
errChen, Yu; Irwin, Regina K.; Williams, Gregory W.; Smithson, Mary; Chong, Zechen; Hardiman, Karin M.
errShare
errSave
B-assembler: a circular bacterial genome assembler
errBMC GENOMICS
IF3.7
err2022-05-11
err4
errOAAI
errHuang, Fengyuan; Xiao, Li; Gao, Min; Vallely, Ethan J.; Dybvig, Kevin; Atkinson, T. Prescott; Waites, Ken B.; Chong, Zechen
errShare
errSave
Accurate long-read de novo assembly evaluation with Inspector
errGENOME BIOLOGY
IF9.4
err2021-11-14
err63
errOAAI
errChen, Yu; Zhang, Yixin; Wang, Amy Y.; Gao, Min; Chong, Zechen
errShare
errSave
RNF2 ablation reprograms the tumor-immune microenvironment and stimulates durable NK and CD4+ T-cell-dependent antitumor immunity
errNATURE CANCER
IF28.5
err2021-10-22
err15
errOAAI
errZhang, Zhuo; Luo, Lin; Xing, Chuan; Chen, Yu; Xu, Peng; Li, Mao; Zeng, Ling; Li, Chao; Ghosh, Sadashib; Della Manna, Deborah; Townes, Tim; Britt, William J.; Wajapeyee, Narendra; Sleckman, Barry P.; Chong, Zechen; Leavenworth, Jianmei Wu; Yang, Eddy S.
errShare
errSave
Scalable De Novo Genome Assembly Using a Pregel-Like Graph-Parallel System
errIEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS
IF3.4
err2021-03-01
err15
PREAI
errGuo, Guimu; Chen, Hongzhi; Yan, Da; Cheng, James; Chen, Jake Y.; Chong, Zechen
errShare
errSave
ClipSV: improving structural variation detection by read extension, spliced alignment and tree-based decision rules
errgenomics proteomics bioinformatics
IF2.8
err2021-02-01
err0
errOAAI
errXu, Peng; Chen, Yu; Gao, Min; Chong, Zechen
errShare
errSave

Research Directions

No research directions
Co-authors
Cooperation Journals
G
Gad Getz
H-index: 248 · Papers: 1.8K
G
Gordon B. Mills
H-index: 231 · Papers: 3.5K
M
Matthew Meyerson
H-index: 223 · Papers: 1.9K
C
Charles M. Perou
H-index: 193 · Papers: 2.0K
E
Evan E. Eichler
H-index: 191 · Papers: 864
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