Not logged in Massively parallel reporter assays and mouse transgenic assays provide correlated and complementary information about neuronal enhancer activity Kosicki, Michael; Cintron, Dianne Laboy; Keukeleire, Pia; Schubach, Max; Page, Nicholas F.; Georgakopoulos-Soares, Ilias; Akiyama, Jennifer A.; Plajzer-Frick, Ingrid; Novak, Catherine S.; Kato, Momoe; Hunter, Riana D.; von Maydell, Kianna; Barton, Sarah; Godfrey, Patrick; Beckman, Erik; Sanders, Stephan J.; Kircher, Martin; Pennacchio, Len A.; Ahituv, Nadav Share Save
A gene desert required for regulatory control of pleiotropic Shox2 expression and embryonic survival Abassah-Oppong, Samuel; Zoia, Matteo; Mannion, Brandon J.; Rouco, Raquel; Tissieres, Virginie; Spurrell, Cailyn H.; Roland, Virginia; Darbellay, Fabrice; Itum, Anja; Gamart, Julie; Festa-Daroux, Tabitha A.; Sullivan, Carly S.; Kosicki, Michael; Rodriguez-Carballo, Eddie; Fukuda-Yuzawa, Yoko; Hunter, Riana D.; Novak, Catherine S.; Plajzer-Frick, Ingrid; Tran, Stella; Akiyama, Jennifer A.; Dickel, Diane E.; Lopez-Rios, Javier; Barozzi, Iros; Andrey, Guillaume; Visel, Axel; Pennacchio, Len A.; Cobb, John; Osterwalder, Marco Share Save
Dynamic enhancer landscapes in human craniofacial development Rajderkar, Sudha Sunil; Paraiso, Kitt; Amaral, Maria Luisa; Kosicki, Michael; Cook, Laura E.; Darbellay, Fabrice; Spurrell, Cailyn H.; Osterwalder, Marco; Zhu, Yiwen; Wu, Han; Afzal, Sarah Yasmeen; Blow, Matthew J.; Kelman, Guy; Barozzi, Iros; Fukuda-Yuzawa, Yoko; Akiyama, Jennifer A.; Afzal, Veena; Tran, Stella; Plajzer-Frick, Ingrid; Novak, Catherine S.; Kato, Momoe; Hunter, Riana D.; von Maydell, Kianna; Wang, Allen; Lin, Lin; Preissl, Sebastian; Lisgo, Steven; Ren, Bing; Dickel, Diane E.; Pennacchio, Len A.; Visel, Axel Share Save
Topologically associating domain boundaries are required for normal genome function Rajderkar, Sudha; Barozzi, Iros; Zhu, Yiwen; Hu, Rong; Zhang, Yanxiao; Li, Bin; Caro, Ana Alcaina; Fukuda-Yuzawa, Yoko; Kelman, Guy; Akeza, Adyam; Blow, Matthew J.; Pham, Quan; Harrington, Anne N.; Godoy, Janeth; Meky, Eman M.; von Maydell, Kianna; Hunter, Riana D.; Akiyama, Jennifer A.; Novak, Catherine S.; Plajzer-Frick, Ingrid; Afzal, Veena; Tran, Stella; Lopez-Rios, Javier; Talkowski, Michael E.; Lloyd, K. C. Kent; Ren, Bing; Dickel, Diane E.; Visel, Axel; Pennacchio, Len A. Share Save
Genome-wide fetalization of enhancer architecture in heart disease Spurrell, Cailyn H.; Barozzi, Iros; Kosicki, Michael; Mannion, Brandon J.; Blow, Matthew J.; Fukuda-Yuzawa, Yoko; Slaven, Neil; Afzal, Sarah Y.; Akiyama, Jennifer A.; Afzal, Veena; Tran, Stella; Plajzer-Frick, Ingrid; Novak, Catherine S.; Kato, Momoe; Lee, Elizabeth A.; Garvin, Tyler H.; Pham, Quan T.; Kronshage, Anne N.; Lisgo, Steven; Bristow, James; Cappola, Thomas P.; Morley, Michael P.; Margulies, Kenneth B.; Pennacchio, Len A.; Dickel, Diane E.; Visel, Axel Share Save
Coding and noncoding variants in EBF3 are involved in HADDS and simplex autism Padhi, Evin M.; Hayeck, Tristan J.; Cheng, Zhang; Chatterjee, Sumantra; Mannion, Brandon J.; Byrska-Bishop, Marta; Willems, Marjolaine; Pinson, Lucile; Redon, Sylvia; Benech, Caroline; Uguen, Kevin; Audebert-Bellanger, Severine; Le Marechal, Cedric; Ferec, Claude; Efthymiou, Stephanie; Rahman, Fatima; Maqbool, Shazia; Maroofian, Reza; Houlden, Henry; Musunuri, Rajeeva; Narzisi, Giuseppe; Abhyankar, Avinash; Hunter, Riana D.; Akiyama, Jennifer; Fries, Lauren E.; Ng, Jeffrey K.; Mehinovic, Elvisa; Stong, Nick; Allen, Andrew S.; Dickel, Diane E.; Bernier, Raphael A.; Gorkin, David U.; Pennacchio, Len A.; Zody, Michael C.; Turner, Tychele N. Share Save
Ultraconserved enhancer function does not require perfect sequence conservation Snetkova, Valentina; Ypsilanti, Athena R.; Akiyama, Jennifer A.; Mannion, Brandon J.; Plajzer-Frick, Ingrid; Novak, Catherine S.; Harrington, Anne N.; Pham, Quan T.; Kato, Momoe; Zhu, Yiwen; Godoy, Janeth; Meky, Eman; Hunter, Riana D.; Shi, Marie; Kvon, Evgeny Z.; Afzal, Veena; Tran, Stella; Rubenstein, John L. R.; Visel, Axel; Pennacchio, Len A.; Dickel, Diane E. Share Save
Supervised enhancer prediction with epigenetic pattern recognition and targeted validation Sethi, Anurag; Gu, Mengting; Gumusgoz, Emrah; Chan, Landon; Yan, Koon-Kiu; Rozowsky, Joel; Barozzi, Iros; Afzal, Veena; Akiyama, Jennifer A.; Plajzer-Frick, Ingrid; Yan, Chengfei; Novak, Catherine S.; Kato, Momoe; Garvin, Tyler H.; Pham, Quan; Harrington, Anne; Mannion, Brandon J.; Lee, Elizabeth A.; Fukuda-Yuzawa, Yoko; Visel, Axel; Dickel, Diane E.; Yip, Kevin Y.; Sutton, Richard; Pennacchio, Len A.; Gerstein, Mark Share Save
Parkinson-Associated SNCA Enhancer Variants Revealed by Open Chromatin in Mouse Dopamine Neurons McClymont, Sarah A.; Hook, Paul W.; Soto, Alexandra, I; Reed, Xylena; Law, William D.; Kerans, Samuel J.; Waite, Eric L.; Briceno, Nicole J.; Thole, Joey F.; Heckman, Michael G.; Diehl, Nancy N.; Wszolek, Zbigniew K.; Moore, Cedric D.; Zhu, Heng; Akiyama, Jennifer A.; Dicke, Diane E.; Visel, Axel; Pennacchio, Len A.; Ross, Owen A.; Beer, Michael A.; McCallion, Andrew S. Share Save
HAND2 Target Gene Regulatory Networks Control Atrioventricular Canal and Cardiac Valve Development Laurent, Frederic; Girdziusaite, Ausra; Gamart, Julie; Barozzi, Iros; Osterwalder, Marco; Akiyama, Jennifer A.; Lincoln, Joy; Lopez-Rios, Javier; Visel, Axel; Zuniga, Aimee; Zeller, Rolf Share Save
Genome-wide compendium and functional assessment of in vivo heart enhancers Dickel, Diane E.; Barozzi, Iros; Zhu, Yiwen; Fukuda-Yuzawa, Yoko; Osterwalder, Marco; Mannion, Brandon J.; May, Dalit; Spurrell, Cailyn H.; Plajzer-Frick, Ingrid; Pickle, Catherine S.; Lee, Elizabeth; Garvin, Tyler H.; Kato, Momoe; Akiyama, Jennifer A.; Afzal, Veena; Lee, Ah Young; Gorkin, David U.; Ren, Bing; Rubin, Edward M.; Visel, Axel; Pennacchio, Len A. Share Save
A distal 594 bp ECR specifies Hmx1 expression in pinna and lateral facial morphogenesis and is regulated by the Hox-Pbx-Meis complex Rosin, Jessica M.; Li, Wenjie; Cox, Liza L.; Rolfe, Sara M.; Latorre, Victor; Akiyama, Jennifer A.; Visel, Axel; Kuramoto, Takashi; Bobola, Nicoletta; Turner, Eric E.; Cox, Timothy C. Share Save
Share Save
Share Save
Tissue-specific SMARCA4 binding at active and repressed regulatory elements during embryogenesis Attanasio, Catia; Nord, Alex S.; Zhu, Yiwen; Blow, Matthew J.; Biddie, Simon C.; Mendenhall, Eric M.; Dixon, Jesse; Wright, Crystal; Hosseini, Roya; Akiyama, Jennifer A.; Holt, Amy; Plajzer-Frick, Ingrid; Shoukry, Malak; Afzal, Veena; Ren, Bing; Bernstein, Bradley E.; Rubin, Edward M.; Visel, Axel; Pennacchio, Len A. Share Save
Function-based identification of mammalian enhancers using site-specific integration Dickel, Diane E.; Zhu, Yiwen; Nord, Alex S.; Wylie, John N.; Akiyama, Jennifer A.; Afzal, Veena; Plajzer-Frick, Ingrid; Kirkpatrick, Aileen; Goettgens, Berthold; Bruneau, Benoit G.; Visel, Axel; Pennacchio, Len A. Share Save
Chromatin stretch enhancer states drive cell-specific gene regulation and harbor human disease risk variants Parker, Stephen C. J.; Stitzel, Michael L.; Taylor, D. Leland; Orozco, Jose Miguel; Erdos, Michael R.; Akiyama, Jennifer A.; van Bueren, Kelly Lammerts; Chines, Peter S.; Narisu, Narisu; Black, Brian L.; Visel, Axel; Pennacchio, Len A.; Collins, Francis S. Share Save
Large-scale discovery of enhancers from human heart tissue May, Dalit; Blow, Matthew J.; Kaplan, Tommy; McCulley, David J.; Jensen, Brian C.; Akiyama, Jennifer A.; Holt, Amy; Plajzer-Frick, Ingrid; Shoukry, Malak; Wright, Crystal; Afzal, Veena; Simpson, Paul C.; Rubin, Edward M.; Black, Brian L.; Bristow, James; Pennacchio, Len A.; Visel, Axel Share Save
Share Save
.png){kind=icon}
.png){kind=icon}
.png){kind=icon}
.png){kind=icon}
.png){kind=icon}
Share.png){kind=icon}
Save
Not logged in.png){kind=icon}