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Building pangenome graphs Garrison, Erik; Guarracino, Andrea; Heumos, Simon; Villani, Flavia; Bao, Zhigui; Tattini, Lorenzo; Hagmann, Joerg; Vorbrugg, Sebastian; Marco-Sola, Santiago; Kubica, Christian; Ashbrook, David G.; Thorell, Kaisa; Rusholme-Pilcher, Rachel L.; Liti, Gianni; Rudbeck, Emilio; Golicz, Agnieszka A.; Nahnsen, Sven; Yang, Zuyu; Mwaniki, Moses Njagi; Nobrega, Franklin L.; Wu, Yi; Chen, Hao; de Ligt, Joep; Sudmant, Peter H.; Huang, Sanwen; Weigel, Detlef; Soranzo, Nicole; Colonna, Vincenza; Williams, Robert W.; Prins, Pjotr Share Save
GenArchBench: A genomics benchmark suite for arm HPC processors Lopez-Villellas, Lorien; Langarita-Benitez, Ruben; Badouh, Asaf; Soria-Pardos, Victor; Aguado-Puig, Quim; Lopez-Paradis, Guillem; Doblas, Max; Setoain, Javier; Kim, Chulho; Ono, Makoto; Armejach, Adria; Marco-Sola, Santiago; Alastruey-Benede, Jesus; Ibanez, Pablo; Moreto, Miquel Share Save
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Pangenome graph construction from genome alignments with Minigraph-Cactus Hickey, Glenn; Monlong, Jean; Ebler, Jana; Novak, Adam M.; Eizenga, Jordan M.; Gao, Yan; Marschall, Tobias; Li, Heng; Paten, Benedict; Abel, Haley J.; Antonacci-Fulton, Lucinda L.; Asri, Mobin; Baid, Gunjan; Baker, Carl A.; Belyaeva, Anastasiya; Billis, Konstantinos; Bourque, Guillaume; Buonaiuto, Silvia; Carroll, Andrew; Chaisson, Mark J. P.; Chang, Pi-Chuan; Chang, Xian H.; Cheng, Haoyu; Chu, Justin; Cody, Sarah; Colonna, Vincenza; Cook, Daniel E.; Cook-Deegan, Robert M.; Cornejo, Omar E.; Diekhans, Mark; Doerr, Daniel; Ebert, Peter; Ebler, Jana; Eichler, Evan E.; Eizenga, Jordan M.; Fairley, Susan; Fedrigo, Olivier; Felsenfeld, Adam L.; Feng, Xiaowen; Fischer, Christian; Flicek, Paul; Formenti, Giulio; Frankish, Adam; Fulton, Robert S.; Gao, Yan; Garg, Shilpa; Garrison, Erik; Garrison, Nanibaa' A.; Giron, Carlos Garcia; Green, Richard E.; Groza, Cristian; Guarracino, Andrea; Haggerty, Leanne; Hall, Ira M.; Harvey, William T.; Haukness, Marina; Haussler, David; Heumos, Simon; Hickey, Glenn; Hoekzema, Kendra; Hourlier, Thibaut; Howe, Kerstin; Jain, Miten; Jarvis, Erich D.; Ji, Hanlee P.; Kenny, Eimear E.; Koenig, Barbara A.; Kolesnikov, Alexey; Korbel, Jan O.; Kordosky, Jennifer; Koren, Sergey; Lee, HoJoon; Lewis, Alexandra P.; Liao, Wen-Wei; Lu, Shuangjia; Lu, Tsung-Yu; Lucas, Julian K.; Hugo, Magalhaes; Santiago, Marco-Sola; Marijon, Pierre; Markello, Charles; Marschall, Tobias; Martin, Fergal J.; McCartney, Ann; McDaniel, Jennifer; Miga, Karen H.; Mitchell, Matthew W.; Monlong, Jean; Mountcastle, Jacquelyn; Munson, Katherine M.; Mwaniki, Moses Njagi; Nattestad, Maria; Novak, Adam M.; Nurk, Sergey; Olsen, Hugh E.; Olson, Nathan D.; Pesout, Trevor; Phillippy, Adam M.; Popejoy, Alice B.; Porubsky, David; Prins, Pjotr; Puiu, Daniela; Rautiainen, Mikko; Regier, Allison A.; Rhie, Arang; Sacco, Samuel; Sanders, Ashley D.; Schneider, Valerie A.; Schultz, Baergen, I; Shafin, Kishwar; Sibbesen, Jonas A.; Siren, Jouni; Smith, Michael W.; Sofia, Heidi J.; Abou Tayoun, Ahmad N.; Thibaud-Nissen, Francoise; Tomlinson, Chad; Tricomi, Francesca Floriana; Villani, Flavia; Vollger, Mitchell R.; Wagner, Justin; Walenz, Brian; Wang, Ting; Wood, Jonathan M. D.; Zimin, Aleksey, V; Zook, Justin M. Share Save
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ChimPipe: accurate detection of fusion genes and transcription-induced chimeras from RNA-seq data Rodriguez-Martin, Bernardo; Palumbo, Emilio; Marco-Sola, Santiago; Griebel, Thasso; Ribeca, Paolo; Alonso, Graciela; Rastrojo, Alberto; Aguado, Begona; Guigo, Roderic; Djebali, Sarah Share Save
From Wet-Lab to Variations: Concordance and Speed of Bioinformatics Pipelines for Whole Genome and Whole Exome Sequencing Laurie, Steve; Fernandez-Callejo, Marcos; Marco-Sola, Santiago; Trotta, Jean-Remi; Camps, Jordi; Chacon, Alejandro; Espinosa, Antonio; Gut, Marta; Gut, Ivo; Heath, Simon; Beltran, Sergi Share Save
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