Melissa Smith - Publications, H-index & Citations

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Melissa Smith

university of louisville

35H-index

230Paper Count

5.9KCitation Count

Published Papers 73

Publication Date

Phased T2T horse and donkey assemblies from a mule reveal peculiar equid centromere evolution

Cell Genomics

IF9

2026-08-06

OAAI

Kai Li; Eleonora Cappelletti; Carey Dessaix; Julia Ciosek; Emily Robyn; Lauren Johnson; Nahla Hussien AbouEl Ela; Xiomara Arias; David L. Adelson; Terje Raudsepp; Francesca M. Piras; Melissa L. Smith; Elizabeth Hudson; Brandon D. Pickett; Sergey Koren; Brian P. Walenz; Shelise Y. Brooks; Christina Sison; Juyun Crawford; Gerard Bouffard

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Allograft Rejection and the Latent HIV Reservoir in Kidney Transplant Recipients with HIV

The Journal of Infectious Diseases

IF0

2026-03-13

OAAI

Andrew Sulaiman; Miruthula Tamil Selvan; Ping Yang; Xianming Zhu; Yolanda Eby; Sarah E Benner; Reinaldo E Fernandez; Sarah Hussain; Diane Brown; Niraj Desai; Sander Florman; Meenakshi M Rana; Rachel Friedman-Moraco; Marcus R Pereira; Shikha Mehta; Peter Stock; Alexander Gilbert; Michele I Morris; Valentina Stosor; Sapna A Mehta; Catherine B Small; Karthik Ranganna; Carlos A Q Santos; Saima Aslam; Maricar Malinis; Nahel Elias; Emily A Blumberg; Allan Massie; Melissa L Smith; Megan Morsheimer; Gregory M Laird; Robert Siliciano; Dorry L Segev; Christine M Durand; Andrew D Redd; Aaron AR Tobian; null

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Adaptation of lentiviral vectors for viral gene therapy and their impact on host cell biology

Journal of Translational Medicine

IF7.5

2026-01-27

OAAI

Catherine W. Kaiser; Eric C. Rouchka; Melissa L. Smith

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Development and validation of HIV SMRTcap for the characterization of HIV-1 reservoirs across tissues and subtypes

PLoS Pathogens

IF4.9

2026-01-01

PREAI

Sadri, Ghazal; Nadakal, Steven T.; Lauer, William; Kos, Justin; Singh, Parmit K.; Elliott, Erin; Kaiser, Catherine W.; Ford, Easton E.; Richardson, Nadia; Shields, Kaitlyn M.; Hudson, Elizabeth; Linden, Noemi L.; Danesh, Ali; Powell, James; Warburton, Peter; Soto, Juan; Emery, Matthew; Deikus, Gintaras; Lee, Guinevere Q.; Lamers, Susanna L.; Reynolds, Steven J.; Galiwango, Ronald; Prodger, Jessica L.; Tomusange, Stephen; Kityamuweesi, Taddeo; Han, Tina; Jones, R. Brad; Tobian, Aaron A. R.; Engelman, Alan N.; Sebra, Robert; Morgello, Susan; Redd, Andrew D.; Sachs, David; Rouchka, Eric; Smith, Melissa L.

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Germline polymorphisms in the immunoglobulin kappa and lambda loci underpinning antibody light chain repertoire variability

Nature Communications

IF15.7

2025-11-28

OAAI

Eric Engelbrecht; Oscar L. Rodriguez; William Lees; Zach Vanwinkle; Kaitlyn Shields; Steven Schultze; William S. Gibson; David R. Smith; Uddalok Jana; Swati Saha; Ayelet Peres; Gur Yaari; Melissa L. Smith; Corey T. Watson

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The hidden diversity of antibody heavy chains implications for myasthenia gravis

JOURNAL OF IMMUNOLOGY

IF3.4

2025-11-01

PREAI

Ford, Easton E.; Pendyala, Veenasravani; Pham, Minh C.; Yandamuri, Soumya S.; Rodriguez, Oscar L.; Jana, Uddalok; VanWinkle, Zach; Hudson, Elizabeth A.; Young, Lindsay; O'Connor, Kevin C.; Smith, Melissa L.; Watson, Corey T.

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The human IG heavy chain constant gene locus is enriched for large structural variants and coding polymorphisms that vary among human populations

Cell Genomics

IF9

2025-10-27

OAAI

Uddalok Jana; Oscar L. Rodriguez; William Lees; Eric Engelbrecht; Zach Vanwinkle; Ayelet Peres; William S. Gibson; Kaitlyn Shields; Steven Schultze; Abdullah Dorgham; Matthew Emery; Gintaras Deikus; Robert Sebra; Evan E. Eichler; Gur Yaari; Melissa L. Smith; Corey T. Watson

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Ramantamig (JNJ-79635322), a novel T cell engaging trispecific antibody targeting BCMA, GPRC5D, and CD3, in multiple myeloma models

Blood

IF23.1

2025-10-21

PREAI

Kodandaram Pillarisetti; Danlin Yang; Leopoldo Luistro; Jianhong Yao; Melissa Smith; Peter Vulfson; James Testa; Randolph Ponticiello; Scott Brodeur; Bradley Heidrich; Kathryn Packman; Sanjaya Singh; Ricardo Attar; Yusri Elsayed; Ulrike Philippar

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Ultra-long sequencing for contiguous haplotype resolution of the human immunoglobulin heavy-chain locus

GENOME RESEARCH

IF5.5

2025-10-01

OAAI

Gornitzka, Mari B.; Rosjo, Egil; Jana, Uddalok; Ford, Easton E.; Tourancheau, Alan; Lees, William D.; Vanwinkle, Zachary; Smith, Melissa L.; Watson, Corey T.; Lossius, Andreas

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Tissue tropism and functional adaptation of the SARS-CoV-2 spike protein in a fatal case of COVID-19

JOURNAL OF VIROLOGY

IF3.8

2025-10-01

PREAI

Johnson, Katherine E. E.; Stein, Sydney; Boateng, Rita Afriyie; Jain, Shilpi; Ramelli, Sabrina C.; Stantliff, Trevor; Curran, Shelly; Ramos-Benitez, Marcos J.; Platt, Andrew P.; Banakis, Stephanie; Wang, Wei; Hewitt, Stephen M.; Zerbe, Christa; Holland, Steven M.; Kang, Elizabeth M.; Singh, Manmeet; de Wit, Emmie; Lauer, William A.; Rouchka, Eric C.; Smith, Melissa; Suthar, Mehul S.; Chertow, Daniel S.; Ghedin, Elodie

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Diverse priming outcomes under conditions of very rare precursor B cells

IMMUNITY

IF26.3

2025-04-01

OAAI

Madden, Patrick J.; Marina-Zarate, Ester; Rodrigues, Kristen A.; Steichen, Jon M.; Shil, Monolina; Ni, Kaiyuan; Michaels, Katarzyna Kaczmarek; Maiorino, Laura; Upadhyay, Amit A.; Saha, Swati; Pradhan, Arpan; Kalyuzhiny, Oleksandr; Liguori, Alessia; Lopez, Paul G.; Phung, Ivy; Flynn, Claudia; Zhou, Amelia; Melo, Mariane B.; Lemnios, Ashley; Phelps, Nicole; Georgeson, Erik; Alavi, Nushin; Kubitz, Michael; Lu, Danny; Eskandarzadeh, Saman; Metz, Amanda; Rodriguez, Oscar L.; Shields, Kaitlyn; Schultze, Steven; Smith, Melissa L.; Healy, Brandon S.; Lim, Deuk; Lewis, Vanessa R.; Ben-Akiva, Elana; Pinney III, William; Gregory, Justin; Xiao, Shuhao; Carnathan, Diane G.; Kasturi, Sudhir Pai; Watson, Corey T.; Bosinger, Steven E.; Silvestri, Guido; Schief, William R.; Irvine, Darrell J.; Crotty, Shane

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Full-length mRNA sequencing resolves novel variation in 5′ UTR length for genes expressed during human CD4 T-cell activation

IMMUNOGENETICS

IF2.9

2025-02-05

OAAI

Cassandra R. Woolley; Julia H. Chariker; Eric C. Rouchka; Easton E. Ford; Elizabeth Hudson; Kamille M. Rasche; Caleb S. Whitley; Zachary Vanwinkle; Carolyn R. Casella; Melissa L. Smith; Thomas C. Mitchell

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IMPACT OF REDUCED TIME TO BASAL SQ INSULIN ADMINISTRATION IN DKA PATIENTS: A PILOT

CRITICAL CARE MEDICINE

IF6

2025-01-30

PREAI

Smith, Melissa; Sunderkrishnan, Ravi

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Visium spatial transcriptomics and proteomics identifies novel hepatic cell populations and transcriptomic signatures of alcohol-associated hepatitis

ALCOHOL-CLINICAL AND EXPERIMENTAL RESEARCH

IF2.7

2024-11-26

OAAI

Gripshover, Tyler C.; Treves, Rui S.; Rouchka, Eric C.; Chariker, Julia H.; Zheng, Shirong; Hudson, Elizabeth; Smith, Melissa L.; Singal, Ashwani K.; Mcclain, Craig J.; Hardesty, Josiah E.

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Construction and evaluation of a new rat reference genome assembly, GRCr8, from long reads and long-range scaffolding

GENOME RESEARCH

IF5.5

2024-11-08

PREAI

Li, Kai; Smith, Melissa L.; Blazier, J. Chris; Kochan, Kelli J.; Wood, Jonathan M. D.; Howe, Kerstin; Kwitek, Anne E.; Dwinell, Melinda R.; Chen, Hao; Ciosek, Julia L.; Masterson, Patrick; Murphy, Terence D.; Kalbfleisch, Theodore S.; Doris, Peter A.

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The Correlation between Plasma Circulating Tumor DNA and Radiographic Tumor Burden

JOURNAL OF MOLECULAR DIAGNOSTICS

IF3.4

2024-11-01

PREAI

Alexander, Evan M.; Miller, Hunter A.; Egger, Michael E.; Smith, Melissa L.; Yaddanapudi, Kavitha; Linder, Mark W.

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Genetic and phenotypic changes to Venezuelan equine encephalitis virus following treatment with β-D-N4-hydroxycytidine, an RNA mutagen

SCIENTIFIC REPORTS

IF3.9

2024-10-25

OAAI

Alejandro, Brian; Kim, Eun Jung; Hwang, Jae Yeon; Park, Juw Won; Smith, Melissa; Chung, Donghoon

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Spatial technologies to evaluate the HIV-1 reservoir and its microenvironment in the lymph node

MBIO

IF4.7

2024-08-14

OAAI

Zaman, Fatima; Smith, Melissa L.; Balagopal, Ashwin; Durand, Christine M.; Redd, Andrew D.; Tobian, Aaron A. R.

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Vaccination induces broadly neutralizing antibody precursors to HIV gp41 (vol 25, pg 1073, 2024)

NATURE IMMUNOLOGY

IF27.6

2024-06-14

OAAI

Schiffner, Torben; Phung, Ivy; Ray, Rashmi; Irimia, Adriana; Tian, Ming; Swanson, Olivia; Lee, Jeong Hyun; Lee, Chang-Chun D.; Marina-Zarate, Ester; Cho, So Yeon; Huang, Jiachen; Ozorowski, Gabriel; Skog, Patrick D.; Serra, Andreia M.; Rantalainen, Kimmo; Allen, Joel D.; Baboo, Sabyasachi; Rodriguez, Oscar L.; Himansu, Sunny; Zhou, Jianfu; Hurtado, Jonathan; Flynn, Claudia T.; McKenney, Katherine; Havenar-Daughton, Colin; Saha, Swati; Shields, Kaitlyn; Schultze, Steven; Smith, Melissa L.; Liang, Chi-Hui; Toy, Laura; Pecetta, Simone; Lin, Ying-Cing; Willis, Jordan R.; Sesterhenn, Fabian; Kulp, Daniel W.; Hu, Xiaozhen; Cottrell, Christopher A.; Zhou, Xiaoya; Ruiz, Jennifer; Wang, Xuesong; Nair, Usha; Kirsch, Kathrin H.; Cheng, Hwei-Ling; Davis, Jillian; Kalyuzhniy, Oleksandr; Liguori, Alessia; Diedrich, Jolene K.; Ngo, Julia T.; Lewis, Vanessa; Phelps, Nicole; Tingle, Ryan D.; Spencer, Skye; Georgeson, Erik; Adachi, Yumiko; Kubitz, Michael; Eskandarzadeh, Saman; Elsliger, Marc A.; Amara, Rama R.; Landais, Elise; Briney, Bryan; Burton, Dennis R.; Carnathan, Diane G.; Silvestri, Guido; Watson, Corey T.; Yates, John R.; Paulson, James C.; Crispin, Max; Grigoryan, Gevorg; Ward, Andrew B.; Sok, Devin; Alt, Frederick W.; Wilson, Ian A.; Batista, Facundo D.; Crotty, Shane; Schief, William R.

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Systematic assessment of long-read RNA-seq methods for transcript identification and quantification

NATURE METHODS

IF32.1

2024-06-07

OAAI

Pardo-Palacios, Francisco J.; Wang, Dingjie; Reese, Fairlie; Diekhans, Mark; Carbonell-Sala, Silvia; Williams, Brian; Loveland, Jane E.; De Maria, Maite; Adams, Matthew S.; Balderrama-Gutierrez, Gabriela; Behera, Amit K.; Gonzalez Martinez, Jose M.; Hunt, Toby; Lagarde, Julien; Liang, Cindy E.; Li, Haoran; Meade, Marcus Jerryd; Moraga Amador, David A.; Prjibelski, Andrey D.; Birol, Inanc; Bostan, Hamed; Brooks, Ashley M.; Celik, Muhammed Hasan; Chen, Ying; Du, Mei R. M.; Felton, Colette; Goeke, Jonathan; Hafezqorani, Saber; Herwig, Ralf; Kawaji, Hideya; Lee, Joseph; Li, Jian-Liang; Lienhard, Matthias; Mikheenko, Alla; Mulligan, Dennis; Nip, Ka Ming; Pertea, Mihaela; Ritchie, Matthew E.; Sim, Andre D.; Tang, Alison D.; Wan, Yuk Kei; Wang, Changqing; Wong, Brandon Y.; Yang, Chen; Barnes, If; Berry, Andrew E.; Capella-Gutierrez, Salvador; Cousineau, Alyssa; Dhillon, Namrita; Fernandez-Gonzalez, Jose M.; Ferrandez-Peral, Luis; Garcia-Reyero, Natalia; Goetz, Stefan; Hernandez-Ferrer, Carles; Kondratova, Liudmyla; Liu, Tianyuan; Martinez-Martin, Alessandra; Menor, Carlos; Mestre-Tomas, Jorge; Mudge, Jonathan M.; Panayotova, Nedka G.; Paniagua, Alejandro; Repchevsky, Dmitry; Ren, Xingjie; Rouchka, Eric; Saint-John, Brandon; Sapena, Enrique; Sheynkman, Leon; Smith, Melissa Laird; Suner, Marie-Marthe; Takahashi, Hazuki; Youngworth, Ingrid A.; Carninci, Piero; Denslow, Nancy D.; Guigo, Roderic; Hunter, Margaret E.; Maehr, Rene; Shen, Yin; Tilgner, Hagen U.; Wold, Barbara J.; Vollmers, Christopher; Frankish, Adam; Au, Kin Fai; Sheynkman, Gloria M.; Mortazavi, Ali; Conesa, Ana; Brooks, Angela N.

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Research Directions