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J

Jan Hasenauer

bonn center for mathematical life sciences

46H-index
363Paper Count
6.6KCitation Count
Published Papers 86
Publication Date
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MEmilio: a high performance Modular EpideMIcs simuLatIOn software for multi-scale and comparative simulations of infectious disease dynamics
errScientific Reports
IF3.9
err2026-08-27
err0
errOAAI
errJulia Bicker; Carlotta Gerstein; David Kerkmann; Sascha Korf; René Schmieding; Anna Wendler; Henrik Zunker; Daniel Abele; Maximilian Betz; Khoa Nguyen; Lena Plötzke; Kilian Volmer; Agatha Schmidt; Nils Waßmuth; Patrick Lenz; Daniel Richter; Hannah Tritzschak; Ralf Hannemann-Tamas; Julian Litz; Paul Johannssen; Marielena Borges; Annika Jungklaus; Manuel Heger; Annalena Lange; Elisabeth Kluth; Kathrin Rack; Vincent Wieland; Jonas Arruda; Sebastian C. Binder; Margrit Klitz; Martin Siggel; Manuel Dahmen; Achim Basermann; Michael Meyer-Hermann; Jan Hasenauer; Martin J. Kühn
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Coupled epidemiological and wastewater modeling at the urban scale: A case study for Munich
erriScience
IF4.1
err2026-07-22
err0
errOAAI
errJulia Bicker; Natalie Tomza; Karina Wallrafen-Sam; Nina Schmid; Andreas F. Hofmann; Sascha Korf; Alain Schengen; Jasmin Javanmardi; Andreas Wieser; Martin J. Kühn; Jan Hasenauer
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Suggested experimental design and computational modeling to infer single-cell lipid dynamics from a single destructive measurement
erriScience
IF4.1
err2026-03-25
err0
errOAAI
errPaul Jonas Jost; Daniel Weindl; Klaus Wunderling; Christoph Thiele; Jan Hasenauer
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errSave
Latent transition analysis for longitudinal studies of post-acute infection syndromes
errNature Communications
IF15.7
err2026-02-10
err0
errOAAI
errRoy Gusinow; Anna Górska; Lorenzo Maria Canziani; Iris Lopes-Rafegas; Carolina Alvarez Garavito; Adriana Tami; Elisa Gentilotti; Elisa Sicuri; Cédric Laouénan; Jade Ghosn; Aline-Marie Florence; Nadhem Lahfej; Fulvia Mazzaferri; Lidia Del Piccolo; Maddalena Giannella; Alice Toschi; Michela Di Chiara; Maria Giulia Caponcello; Zaira R. Palacios-Baena; Karin I. Wold; Elisa Rossi; Evelina Tacconelli; Jan Hasenauer
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Cholesterol-lowering effects of oats induced by microbially produced phenolic metabolites in metabolic syndrome: a randomized controlled trial
errNature Communications
IF15.7
err2026-01-14
err0
errOAAI
errLinda Klümpen; Aakash Mantri; Maren Philipps; Waldemar Seel; Laura Schlautmann; Mohamed H. Yaghmour; Verena Wiemann; Birgit Stoffel-Wagner; Martin Coenen; Leonie Weinhold; Jan Hasenauer; Thomas Fließwasser; Sven Burgdorf; Christoph Thiele; Peter Stehle; Marie-Christine Simon
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Shiny-Calorie: a context-aware application for indirect calorimetry data analysis and visualization using R
errBioinformatics Advances
IF2.8
err2026-01-01
err0
errOAAI
errGrein, Stephan; Elschner, Tabea; Kardinal, Ronja; Bruder, Johanna; Strohmeyer, Akim; Gunasekaran, Karthikeyan; Witt, Jennifer; Hermannsdottir, Hildigunnur; Behrens, Janina; U-Din, Mueez; Yu, Jiangyan; Heldmaier, Gerhard; Schreiber, Renate; Rozman, Jan; Heine, Markus; Scheja, Ludger; Worthmann, Anna; Heeren, Joerg; Wachten, Dagmar; Wilhelm-Jungling, Kerstin; Pfeifer, Alexander; Hasenauer, Jan; Klingenspor, Martin
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errSave
Persistent Low-Grade Inflammation and Post-COVID Condition: Evidence from the ORCHESTRA Cohort
errBiomedicines
IF3.9
err2025-12-31
err0
errOAAI
errElisa Gentilotti; Carolina Alvarez Garavito; Anna Górska; Roy Gusinow; Lorenzo Maria Canziani; Pasquale De Nardo; Alessandro Visentin; Maria Giulia Caponcello; Michela Di Chiara; Aline-Marie Florence; Gerolf de Boer; Salvatore Cataudella; the ORCHESTRA Study Group; Gabriel Levy Hara; Adriana Tami; Maddalena Giannella; Cédric Laouénan; Jan Hasenauer; Jesús Rodríguez-Baño; Evelina Tacconelli
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C-COMPASS: a user-friendly neural network tool profiles cell compartments at protein and lipid levels
errNature Methods
IF32.1
err2025-12-04
err0
errOAAI
errDaniel T. Haas; Daniel Weindl; Pamela Kakimoto; Eva-Maria Trautmann; Julia P. Schessner; Xia Mao; Mathias J. Gerl; Maximilian Gerwien; Timo D. Müller; Christian Klose; Xiping Cheng; Jan Hasenauer; Natalie Krahmer
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errSave
Continuous Circulation of Hepatitis E and A Viruses During COVID-19 Pandemic Lockdowns in Munich, Germany—Experience from Three Years of Wastewater Surveillance
errMicroorganisms 2025, Vol. 13, Page 2379
IF0
err2025-10-15
err0
errOAAI
errJasmin Javanmardi; Mathias Schemmerer; Karina Wallrafen-Sam; Jessica Neusser; Raquel Rubio-Acero; Michael Hoelscher; Thomas Kletke; Bernhard Boehm; Michael Schneider; Elisabeth Waldeck; Martin Hoch; Merle M. Böhmer; Christof Geldmacher; Jan Hasenauer; Jürgen J. Wenzel; Andreas Wieser
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A dynamic model for Waddington's landscape accounting for cell-to-cell communication
errMATHEMATICAL BIOSCIENCES
IF1.8
err2025-10-01
err0
errOAAI
errMerkt, Simon; Fuhrmann, Lara; Dudkin, Erika; Schlitzer, Andreas; Niethammer, Barbara; Hasenauer, Jan
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errSave
Identifiability and Uncertainty for Ordinary Differential Equation Models with Qualitative or Semiquantitative Data
errCurrent Opinion in Systems Biology
IF2.2
err2025-09-08
err0
errOAAI
errDomagoj Dorešić; Dilan Pathirana; Daniel Weindl; Jan Hasenauer
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errSave
PEtab.jl: advancing the efficiency and utility of dynamic modelling
errBIOINFORMATICS
IF5.4
err2025-09-01
err0
errOAAI
errPersson, Sebastian; Frohlich, Fabian; Grein, Stephan; Loman, Torkel; Ognissanti, Damiano; Hasselgren, Viktor; Hasenauer, Jan; Cvijovic, Marija
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errSave
Current state and open problems in universal differential equations for systems biology
errnpj Systems Biology and Applications
IF3.5
err2025-08-30
err0
errOAAI
errMaren Philipps; Nina Schmid; Jan Hasenauer
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errSave
Integrative modeling of the spread of serious infectious diseases and corresponding wastewater dynamics
errEpidemics
IF2.4
err2025-05-31
err0
errOAAI
errNina Schmid; Julia Bicker; Andreas F. Hofmann; Karina Wallrafen-Sam; David Kerkmann; Andreas Wieser; Martin J. Kühn; Jan Hasenauer
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errSave
Assessment of uncertainty quantification in universal differential equations
errPHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES
IF3.7
err2025-04-02
err0
errOAAI
errSchmid, Nina; del Pozo, David Fernandes; Waegeman, Willem; Hasenauer, Jan
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errSave
Loss formulations for assumption-free neural inference of SDE coefficient functions
errNPJ SYSTEMS BIOLOGY AND APPLICATIONS
IF3.5
err2025-03-01
err0
errOAAI
errVaisband, Marc; von Bornhaupt, Valentin; Schmid, Nina; Abulizi, Izdar; Hasenauer, Jan
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errSave
Effects of time-of-day on the noradrenaline, adrenaline, cortisol and blood lipidome response to an ice bath
errSCIENTIFIC REPORTS
IF3.9
err2025-01-08
err0
errOAAI
errBraunsperger, Alexander; Bauer, Maximilian; Brahim, Chaima Ben; Seep, Lea; Tischer, Dominik; Peitzsch, Mirko; Hasenauer, Jan; Figueroa, Sieglinde Hechenbichler; Worthmann, Anna; Heeren, Joerg; Dyar, Kenneth A.; Koehler, Karsten; Soriano-Arroquia, Ana; Schoenfelder, Martin; Wackerhage, Henning
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Retro Mode Imaging for Detection and Quantification of Sub-RPE Drusen and Subretinal Drusenoid Deposits in Age-Related Macular Degeneration
errJOURNAL OF CLINICAL MEDICINE
IF2.9
err2024-07-15
err0
errOAAI
errSassmannshausen, Marlene; Sautbaeva, Leyla; von der Emde, Leon Alexander; Vaisband, Marc; Sloan, Kenneth R.; Hasenauer, Jan; Holz, Frank G.; Ach, Thomas
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errSave
Tailoring COVID-19 Vaccination Strategies in High-Seroprevalence Settings: Insights from Ethiopia
errVACCINES
IF3.4
err2024-07-05
err0
errOAAI
errGudina, Esayas Kebede; Elsbernd, Kira; Yilma, Daniel; Kisch, Rebecca; Wallrafen-Sam, Karina; Abebe, Gemeda; Mekonnen, Zeleke; Berhane, Melkamu; Gerbaba, Mulusew; Suleman, Sultan; Mamo, Yoseph; Rubio-Acero, Raquel; Ali, Solomon; Zeynudin, Ahmed; Merkt, Simon; Hasenauer, Jan; Chala, Temesgen Kabeta; Wieser, Andreas; Kroidl, Arne
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Spatially Resolved Association of Structural Biomarkers on Retinal Function in Non-Exudative Age-Related Macular Degeneration Over 4 Years
errINVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE
IF4.7
err2024-04-30
err1
errOAAI
errSassmannshausen, Marlene; Doengelci, Senem; Vaisband, Marc; von der Emde, Leon; Sloan, Kenneth R.; Hasenauer, Jan; Holz, Frank G.; Schmitz-Valckenberg, Steffen; Ach, Thomas
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Research Directions

No research directions
Co-authors
Cooperation Journals
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Chris Sander
H-index: 191 · Papers: 849
P
Paolo Boffetta
H-index: 167 · Papers: 2.1K
A
André Franke
H-index: 152 · Papers: 1.2K
K
Kian Fan Chung
H-index: 142 · Papers: 1.6K
H
Hans Lehrach
H-index: 133 · Papers: 1.1K
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