Not logged in Short Ileal Microvillus Length Phenotype Associates with Progression from Inflammatory to Complicated Disease Behavior in Pediatric Crohn's Disease Haberman, Yael; Braun, Tzipi; Karns, Rebekah; Bartel, Courtney A.; Bonkowski, Erin; Simpson, Katherine F.; Walters, Thomas D.; Hyams, Jeffrey S.; Liu, Ta-Chiang; Kugathasan, Subra; Denson, Lee A.; VanDussen, Kelli L. Share Save
Single-cell and spatial multi-omics reveal interferon signaling in the pathogenesis of perianal fistulizing Crohn's disease Nguyen, Khai Mac; Cao, Siyan; Ma, Kaiming; Yao, Xin; Liu, Ta-Chiang; Ayoub, Malek; Devi, Jalpa; Liu, Yizhou; Smith, Radhika; Silviera, Matthew; Hunt, Steven R.; Wise, Paul E.; Mutch, Matthew G.; Glasgow, Sean; Chapman, William; Cowan, Michelle; Ciorba, Matthew; Colonna, Marco; Deepak, Parakkal Share Save
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Detection of Alternative Lengthening of Telomeres via Chromogenic In Situ Hybridization for the Prognostication of PanNETs and Other Neoplasms Heaphya, Christopher M.; Patel, Simmi; Smith, Katelyn; Wondisford, Anne R.; Lynskey, Michelle L.; J.O'Sullivan, Roderick; Fuhrer, Kimberly; Han, Xiaoli; Seethala, Raja R.; Liu, Ta-Chiang; Cao, Dengfeng; Ertunc, Onur; Zheng, Qizhi; Stojanova, Marija; Zureikat, Amer H.; Paniccia, Alessandro; Lee, Kenneth; Ongchin, Melanie C.; Pingpank, James F.; Zeh, Herbert J.; Hogg, Melissa E.; Geller, David; Marsh, James Wallis; Brand, Randall E.; Chennat, Jennifer S.; Das, Rohit; Fasanella, Kenneth E.; Gabbert, Charles; Khalid, Asif; Mcgrath, Kevin; Lennon, Anne Marie; Sarkaria, Savreet; Singh, Harkirat; Slivka, Adam; Hsu, Dennis; Zhang, Janie Y.; Nacev, Benjamin A.; Nikiforova, Marina N.; Wald, Abigail I.; Vaddi, Neel; Marzo, Angelo M. De; Singhi, Anju H.; Bell, Phoenix D.; Singhi, Aatur D. Share Save
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Development of a deep learning algorithm for Paneth cell density quantification for inflammatory bowel disease Kang, Liang-, I; Sarullo, Kathryn; Marsh, Jon N.; Lu, Liang; Khonde, Pooja; Ma, Changqing; Haritunians, Talin; Mujukian, Angela; Mengesha, Emebet; Mcgovern, Dermot P. B.; Stappenbeck, Thaddeus S.; Swamidass, S. Joshua; Liu, Ta-Chiang Share Save
Macrophage LRRK2 hyperactivity impairs autophagy and induces Paneth cell dysfunction Sun, Shengxiang; Hodel, Miki; Wang, Xiang; De Vicente, Javier; Haritunians, Talin; Debebe, Anketse; Hung, Chen-Ting; Ma, Changqing; Malique, Atika; Nguyen, Hoang N.; Agam, Maayan; Maloney, Michael T.; Goo, Marisa S.; Kluss, Jillian H.; Mishra, Richa; Frein, Jennifer; Foster, Amanda; Ballentine, Samuel; Pandey, Uday; Kern, Justin; Yang, Shaohong; Mengesha, Emebet; Balasubramanian, Iyshwarya; Arguello, Annie; Estrada, Anthony A.; Gao, Nan; Peter, Inga; Mcgovern, Dermot P. B.; Henry, Anastasia G.; Stappenbeck, Thaddeus S.; Liu, Ta-Chiang Share Save
Western diet reduces small intestinal intraepithelial lymphocytes via FXR-Interferon pathway Hung, Chen-Ting; Ma, Changqing; Panda, Santosh K.; Trsan, Tihana; Hodel, Miki; Frein, Jennifer; Foster, Amanda; Sun, Shengxiang; Wu, Hung-Ting; Kern, Justin; Mishra, Richa; Jain, Umang; Ho, Ya-Chi; Colonna, Marco; Stappenbeck, Thaddeus S.; Liu, Ta- Chiang Share Save
Histopathology underlying environmental enteric dysfunction in a cohort study of undernourished children in Bangladesh, Pakistan, and Zambia compared with United States children Kelly, Paul; VanBuskirk, Kelley; Coomes, David; Mouksassi, Samer; Smith, Gerald; Jamil, Zehra; Hossain, Md Shabab; Syed, Sana; Marie, Chelsea; Tarr, Phillip I.; Sullivan, Peter B.; Petri, William A., Jr.; Denno, Donna M.; Ahmed, Tahmeed; Mahfuz, Mustafa; Ali, S. Asad; Moore, Sean R.; Ndao, I. Malick; Tearney, Guillermo J.; Yilmaz, Omer H.; Raghavan, Shyam S.; Moskaluk, Christopher A.; Liu, Ta-Chiang Share Save
Ileal Paneth Cell Phenotype is a Cellular Biomarker for Pouch Complications in Ulcerative Colitis Ma, Changqing; Haritunians, Talin; Gremida, Anas K.; Syal, Gaurav; Shah, Janaki; Yang, Shaohong; Ramos Del Aguila de Rivers, Claudia; Storer, Chad E.; Chen, Ling; Mengesha, Emebet; Mujukian, Angela; Hanna, Mary; Fleshner, Phillip; Binion, David G.; Vandussen, Kelli L.; Stappenbeck, Thaddeus S.; Head, Richard D.; Ciorba, Matthew A.; Mcgovern, Dermot P. B.; Liu, Ta-Chiang Share Save
Diet-omics in the Study of Urban and Rural Crohn disease Evolution (SOURCE) cohort Braun, Tzipi; Feng, Rui; Amir, Amnon; Levhar, Nina; Shacham, Hila; Mao, Ren; Hadar, Rotem; Toren, Itamar; Algavi, Yadid; Abu-Saad, Kathleen; Zhuo, Shuoyu; Efroni, Gilat; Malik, Alona; Picard, Orit; Yavzori, Miri; Agranovich, Bella; Liu, Ta-Chiang; Stappenbeck, Thaddeus S.; Denson, Lee; Kalter-Leibovici, Ofra; Gottlieb, Eyal; Borenstein, Elhanan; Elinav, Eran; Chen, Minhu; Ben-Horin, Shomron; Haberman, Yael Share Save
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NAD+ precursors and bile acid sequestration treat preclinical refractory environmental enteric dysfunction Malique, Atika; Sun, Shengxiang; Chandwe, Kanta; Amadi, Beatrice; Haritunians, Talin; Jain, Umang; Muegge, Brian D.; Frein, Jennifer; Sasaki, Yo; Foster, Amanda; Storer, Chad E.; Mengesha, Emebet; Kern, Justin; Mcgovern, Dermot P. B.; Head, Richard D.; Kelly, Paul; Liu, Ta-Chiang Share Save
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Infection and inflammation stimulate expansion of a CD74+ Paneth cell subset to regulate disease progression Balasubramanian, Iyshwarya; Bandyopadhyay, Sheila; Flores, Juan; Bianchi-Smak, Jared; Lin, Xiang; Liu, Haoran; Sun, Shengxiang; Golovchenko, Natasha B.; Liu, Yue; Wang, Dahui; Patel, Radha; Joseph, Ivor; Suntornsaratoon, Panan; Vargas, Justin; Green, Peter H. R.; Bhagat, Govind; Lagana, Stephen M.; Ying, Wang; Zhang, Yi; Wang, Zhihan; Li, Wei Vivian; Singh, Sukhwinder; Zhou, Zhongren; Kollias, George; Farr, Laura A.; Moonah, Shannon N.; Yu, Shiyan; Wei, Zhi; Bonder, Edward M.; Zhang, Lanjing; Kiela, Pawel R.; Edelblum, Karen L.; Ferraris, Ronaldo; Liu, Ta-Chiang; Gao, Nan Share Save
RBM47 regulates intestinal injury and tumorigenesis by modifying proliferation, oxidative response, and inflammatory pathways Soleymanjahi, Saeed; Blanc, Valerie; Molitor, Elizabeth A.; Alvarado, David M.; Xie, Yan; Gazit, Vered; Brown, Jeffrey W.; Byrnes, Kathleen; Liu, Ta-Chiang; Mills, Jason C.; Ciorba, Matthew A.; Rubin, Deborah C.; Davidson, Nicholas O. Share Save
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