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SaveWhole-genome resequencing of the wild barley diversity collection: a resource for identifying and exploiting genetic variation for cultivated barley improvement
Spanner, Rebecca; Sallam, Ahmad H.; Guo, Yu; Jayakodi, Murukarthick; Himmelbach, Axel; Fiebig, Anne; Simmons, Jamie; Bethke, Gerit; Lee, Yoonjung; Pacheco Arge, Luis Willian; Qiu, Yinjie; Badea, Ana; Baum, Michael; Belzile, Francois; Ben-David, Roi; Brueggeman, Robert; Case, Austin; Cattivelli, Luigi; Davis, Michael; Dockter, Christoph; Dolezel, Jaroslav; Dreiseitl, Antonin; Gavin, Ryan; Glick, Lior; Greiner, Stephan; Hamilton, Ruth; Hayes, Patrick M.; Heisel, Scott; Henson, Cynthia; Kilian, Benjamin; Komatsuda, Takao; Li, Chengdao; Liu, Cheng; Mahalingam, Ramamurthy; Maruschewski, Maren; Matny, Oadi; Maurer, Andreas; Mayer, Klaus F. X.; Mayrose, Itay; Moscou, Matthew; Muehlbauer, Gary J.; Oono, Youko; Ordon, Frank; Ozkan, Hakan; Pecinka, Ales; Perovic, Dragan; Pillen, Klaus; Pourkheirandish, Mohammad; Russell, Joanne; Safar, Jan; Salvi, Silvio; Sanchez-Garcia, Miguel; Sato, Kazuhiro; Schmutzer, Thomas; Scholz, Uwe; Scott, Jeness; Singh Brar, Gurcharn; Smith, Kevin P.; Sorrells, Mark E.; Spannagl, Manuel; Stein, Nils; Tondelli, Alessandro; Tuberosa, Roberto; Tucker, James; Turkington, Thomas; Valkoun, Jan; Verma, Ramesh Pal Singh; Vinje, Marcus A.; von Korff, Maria; Walling, Jason G.; Waugh, Robbie; Wise, Roger P.; Wulff, Brande B. H.; Yang, Shengming; Zhang, Guoping; Morrell, Peter L.; Mascher, Martin; Steffenson, Brian J. Share Save Share Save Genomics-informed prebreeding unlocks the diversity in genebanks for wheat improvementSchulthess, Albert W.; Kale, Sandip M.; Liu, Fang; Zhao, Yusheng; Philipp, Norman; Rembe, Maximilian; Jiang, Yong; Beukert, Ulrike; Serfling, Albrecht; Himmelbach, Axel; Fuchs, Jorg; Oppermann, Markus; Weise, Stephan; Boeven, Philipp H. G.; Schacht, Johannes; Longin, C. Friedrich H.; Kollers, Sonja; Pfeiffer, Nina; Korzun, Viktor; Lange, Matthias; Scholz, Uwe; Stein, Nils; Mascher, Martin; Reif, Jochen C. Share Save From data to knowledge - big data needs stewardship, a plant phenomics perspectiveArend, Daniel; Psaroudakis, Dennis; Memon, Junaid Altaf; Rey-Mazon, Elena; Schueler, Danuta; Szymanski, Jedrzej Jakub; Scholz, Uwe; Junker, Astrid; Lange, Matthias Share Save Quantitative monitoring of nucleotide sequence data from genetic resources in context of their citation in the scientific literatureLange, Matthias; Alako, Blaise T. F.; Cochrane, Guy; Ghaffar, Mehmood; Mascher, Martin; Habekost, Pia-Katharina; Hillebrand, Upneet; Scholz, Uwe; Schorch, Florian; Freitag, Jens; Scholz, Amber Hartman Share Save Unlocking big data doubled the accuracy in predicting the grain yield in hybrid wheatZhao, Yusheng; Thorwarth, Patrick; Jiang, Yong; Philipp, Norman; Schulthess, Albert W.; Gils, Mario; Boeven, Philipp H. G.; Longin, C. Friedrich H.; Schacht, Johannes; Ebmeyer, Erhard; Korzun, Viktor; Mirdita, Vilson; Dornte, Jost; Avenhaus, Ulrike; Horbach, Ralf; Coster, Hilmar; Holzapfel, Josef; Ramgraber, Ludwig; Kuhnle, Simon; Varenne, Pierrick; Starke, Anne; Schurmann, Friederike; Beier, Sebastian; Scholz, Uwe; Liu, Fang; Schmidt, Renate H.; Reif, Jochen C. Share Save Chromosome-scale genome assembly provides insights into rye biology, evolution and agronomic potentialRabanus-Wallace, M. Timothy; Hackauf, Bernd; Mascher, Martin; Lux, Thomas; Wicker, Thomas; Gundlach, Heidrun; Baez, Mariana; Houben, Andreas; Mayer, Klaus F. X.; Guo, Liangliang; Poland, Jesse; Pozniak, Curtis J.; Walkowiak, Sean; Melonek, Joanna; Praz, Coraline R.; Schreiber, Mona; Budak, Hikmet; Heuberger, Matthias; Steuernagel, Burkhard; Wulff, Brande; Boerner, Andreas; Byrns, Brook; Cizkova, Jana; Fowler, D. Brian; Fritz, Allan; Himmelbach, Axel; Kaithakottil, Gemy; Keilwagen, Jens; Keller, Beat; Konkin, David; Larsen, Jamie; Li, Qiang; Myskow, Beata; Padmarasu, Sudharsan; Rawat, Nidhi; Sesiz, Ugur; Biyiklioglu-Kaya, Sezgi; Sharpe, Andy; Simkova, Hana; Small, Ian; Swarbreck, David; Toegelova, Helena; Tsvetkova, Natalia; Voylokov, Anatoly V.; Vrana, Jan; Bauer, Eva; Bolibok-Bragoszewska, Hanna; Dolezel, Jaroslav; Hall, Anthony; Jia, Jizeng; Korzun, Viktor; Laroche, Andre; Ma, Xue-Feng; Ordon, Frank; Ozkan, Hakan; Rakoczy-Trojanowska, Monika; Scholz, Uwe; Schulman, Alan H.; Siekmann, Dorthe; Stojalowski, Stefan; Tiwari, Vijay K.; Spannagl, Manuel; Stein, Nils Share Save Long-read sequence assembly: a technical evaluation in barleyMascher, Martin; Wicker, Thomas; Jenkins, Jerry; Plott, Christopher; Lux, Thomas; Koh, Chu Shin; Ens, Jennifer; Gundlach, Heidrun; Boston, Lori B.; Tulpova, Zuzana; Holden, Samuel; Hernandez-Pinzon, Inmaculada; Scholz, Uwe; Mayer, Klaus F. X.; Spannagl, Manuel; Pozniak, Curtis J.; Sharpe, Andrew G.; Simkova, Hana; Moscou, Matthew J.; Grimwood, Jane; Schmutz, Jeremy; Stein, Nils Share Save Implementing FAIR data management within the German Network for Bioinformatics Infrastructure (de.NBI) exemplified by selected use casesMayer, Gerhard; Mueller, Wolfgang; Schork, Karin; Uszkoreit, Julian; Weidemann, Andreas; Wittig, Ulrike; Rey, Maja; Quast, Christian; Felden, Janine; Gloeckner, Frank Oliver; Lange, Matthias; Arend, Daniel; Beier, Sebastian; Junker, Astrid; Scholz, Uwe; Schueler, Danuta; Kestler, Hans A.; Wibberg, Daniel; Puehler, Alfred; Twardziok, Sven; Eils, Juergen; Eils, Roland; Hoffmann, Steve; Eisenacher, Martin; Turewicz, Michael Share Save Share Save Chromosome-scale genome assembly for the duckweed Spirodela intermedia, integrating cytogenetic maps, PacBio and Oxford Nanopore librariesHoang, Phuong T. N.; Fiebig, Anne; Novak, Petr; Macas, Jiri; Cao, Hieu X.; Stepanenko, Anton; Chen, Guimin; Borisjuk, Nikolai; Scholz, Uwe; Schubert, Ingo Share Save Share Save Mobilizing Crop BiodiversityMcCouch, Susan; Navabi, Zahra Katy; Abberton, Michael; Anglin, Noelle L.; Barbieri, Rosa Lia; Baum, Michael; Bett, Kirstin; Booker, Helen; Brown, Gerald L.; Bryan, Glenn J.; Cattivelli, Luigi; Charest, David; Eversole, Kellye; Freitas, Marcelo; Ghamkhar, Kioumars; Grattapaglia, Dario; Henry, Robert; Inglis, Maria Cleria Valadares; Islam, Tofazzal; Kehel, Zakaria; Kersey, Paul J.; King, Graham J.; Kresovich, Stephen; Marden, Emily; Mayes, Sean; Ndjiondjiop, Marie Noelle; Nguyen, Henry T.; Paiva, Samuel Rezende; Papa, Roberto; Phillips, Peter W. B.; Rasheed, Awais; Richards, Christopher; Rouard, Mathieu; Sampaio, Maria Jose Amstalden; Scholz, Uwe; Shaw, Paul D.; Sherman, Brad; Staton, S. Evan; Stein, Nils; Svensson, Jan; Tester, Mark; Valls, Jose Francisco Montenegro; Varshney, Rajeev; Visscher, Stephen; Von Wettberg, Eric; Waugh, Robbie; Wenzl, Peter; Rieseberg, Loren H. Share Save Negative dominance and dominance-by-dominance epistatic effects reduce grain-yield heterosis in wide crosses in wheatBoeven, Philipp H. G.; Zhao, Yusheng; Thorwarth, Patrick; Liu, Fang; Maurer, Hans Peter; Gils, Mario; Schachschneider, Ralf; Schacht, Johannes; Ebmeyer, Erhard; Kazman, Ebrahim; Mirdita, Vilson; Doernte, Jost; Kontowski, Stefan; Horbach, Ralf; Coester, Hilmar; Holzapfel, Josef; Jacobi, Andreas; Ramgraber, Ludwig; Reinbrecht, Carsten; Starck, Norbert; Varenne, Pierrick; Starke, Anne; Schuermann, Friederike; Ganal, Martin; Polley, Andreas; Hartung, Jens; Beier, Sebastian; Scholz, Uwe; Longin, C. Friedrich H.; Reif, Jochen C.; Jiang, Yong; Wuerschum, Tobias Share Save Share Save Supernumerary B chromosomes of Aegilops speltoides undergo precise elimination in roots early in embryo developmentRuban, Alevtina; Schmutzer, Thomas; Wu, Dan D.; Fuchs, Joerg; Boudichevskaia, Anastassia; Rubtsova, Myroslava; Pistrick, Klaus; Melzer, Michael; Himmelbach, Axel; Schubert, Veit; Scholz, Uwe; Houben, Andreas Share Save Kmasker plants - a tool for assessing complex sequence space in plant speciesBeier, Sebastian; Ulpinnis, Chris; Schwalbe, Markus; Muench, Thomas; Hoffie, Robert; Koeppel, Iris; Hertig, Christian; Budhagatapalli, Nagaveni; Hiekel, Stefan; Pathi, Krishna M.; Hensel, Goetz; Grosse, Martin; Chamas, Sindy; Gerasimova, Sophia; Kumlehn, Jochen; Scholz, Uwe; Schmutzer, Thomas Share Save TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source toolsMonat, Cecile; Padmarasu, Sudharsan; Lux, Thomas; Wicker, Thomas; Gundlach, Heidrun; Himmelbach, Axel; Ens, Jennifer; Li, Chengdao; Muehlbauer, Gary J.; Schulman, Alan H.; Waugh, Robbie; Braumann, Ilka; Pozniak, Curtis; Scholz, Uwe; Mayer, Klaus F. X.; Spannagl, Manuel; Stein, Nils; Mascher, Martin Share Save Detecting Large Chromosomal Modifications Using Short Read Data From Genotyping-by-SequencingKeilwagen, Jens; Lehnert, Heike; Berner, Thomas; Beier, Sebastian; Scholz, Uwe; Himmelbach, Axel; Stein, Nils; Badaeva, Ekaterina D.; Lang, Daniel; Kilian, Benjamin; Hackauf, Bernd; Perovic, Dragan Share Save 
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