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Xiaodan Fan

Chinese University of Hong Kong

22H-index
162Paper Count
3.1KCitation Count
Published Papers 47
Publication Date
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SEQUENCE INTERACTION MODEL WITH APPLICATIONS TO TCR-PEPTIDE BINDING
errANNALS OF APPLIED STATISTICS
IF1.4
err2025-12-01
err0
PREAI
errLiu, Ran; Tang, Xinyi; Fan, Xiaodan
errShare
errSave
Cell lineage tracing: Methods, applications, and challenges
errQUANTITATIVE BIOLOGY
IF1.4
err2025-12-01
err2
errOAAI
errMao, Shanjun; Zhang, Chenyang; Chen, Runjiu; Tang, Shan; Fan, Xiaodan; Hu, Jie
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errSave
Uptake of Core Outcome Sets (COS) in China
errJOURNAL OF EVIDENCE BASED MEDICINE
IF3.5
err2025-11-01
err0
PREAI
errQiu, Ruijin; Liu, Shuling; Wang, Wenhui; Chen, Zhuo; Clarke, Mike; Gorst, Sarah L.; Dodd, Susanna; Kearney, Anna; Fan, Xiaodan; Jin, Yinghui; Williamson, Paula R.; Shang, Hongcai
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errSave
Distinct Suppression of Prednisone on Endometrial Immune Cells in Women With Reproductive Failure
errAmerican Journal of Reproductive Immunology
IF2.4
err2025-10-07
err0
errOAAI
errLu Chen; Xiaoyan Chen; Qianhan Xu; Joshua Jing Xi Li; Wen-Jui Yang; Hanbin Wu; Chi Chiu Wang; Xiaodan Fan; Jie Ji; Jacqueline Pui Wah Chung; Mingqing Li; Tin Chiu Li; Tao Zhang
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errSave
BVSim: A benchmarking variation simulator mimicking human variation spectrum
errGigaScience
IF3.9
err2025-08-30
err0
errOAAI
errYongyi Luo; Zhen Zhang; Shu Wang; Jiandong Shi; Jingyu Hao; Sheng Lian; Taobo Hu; Toyotaka Ishibashi; Depeng Wang; Weichuan Yu; Xiaodan Fan
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errSave
Double optimal transport for differential gene regulatory network inference with unpaired samples
errBioinformatics
IF5.4
err2025-08-02
err0
errOAAI
errMengyu Li; Bencong Zhu; Cheng Meng; Xiaodan Fan
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errSave
Iterative optimal transport for multimodal image registration*
errPATTERN RECOGNITION
IF7.6
err2025-04-01
err0
PREAI
errLi, Mengyu; Meng, Cheng; Fan, Xiaodan
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A joint analysis of single cell transcriptomics and proteomics using transformer
errNPJ SYSTEMS BIOLOGY AND APPLICATIONS
IF3.5
err2025-01-02
err0
errOAAI
errChen, Yuanyuan; Fan, Xiaodan; Shi, Chaowen; Shi, Zhiyan; Wang, Chaojie
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errSave
Polysaccharides from Flos Sophorae Immaturus ameliorates insulin resistance in IR-HepG2 cells by co-regulating signaling pathways of AMPK and IRS-1/PI3K/AKT
errINTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES
IF8.5
err2024-11-01
err0
PREAI
errZhong, Rui-Fang; Liu, Chang-Jun; Hao, Ke-Xin; Fan, Xiao-Dan; Jiang, Jian-Guo
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errSave
NetMIM: network-based multi-omics integration with block missingness for biomarker selection and disease outcome prediction
errBRIEFINGS IN BIOINFORMATICS
IF7.7
err2024-09-17
err0
errOAAI
errZhu, Bencong; Zhang, Zhen; Leung, Suet Yi; Fan, Xiaodan
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errSave
Asymptomatic infection and disappearance of clinical symptoms of COVID-19 infectors in China 2022-2023: a cross-sectional study
errSCIENTIFIC REPORTS
IF3.9
err2024-08-06
err0
errOAAI
errZhang, Kaige; Zhong, Xiaoying; Fan, Xiaodan; Yu, Dongdong; Chen, Zhuo; Zhao, Chen; Zhang, Xiaoyu; Guan, Zhiyue; Wei, Xuxu; Wan, Siqi; Zhang, Xuecheng; Zhao, Mengzhu; Dai, Qianqian; Liu, Wenjing; Xu, Qianqian; Kong, Yifan; Han, Songjie; Lin, Hongyuan; Wang, Wenhui; Jiang, Huiru; Gu, Chunling; Zhang, Xiaowei; Jiang, Tong; Liu, Shuling; Cui, Herong; Yang, Xinyu; Jiang, Yin; Chen, Zhao; Sun, Yang; Tao, Liyuan; Zheng, Rui; Qiu, Ruijin; You, Liangzhen; Shang, Hongcai
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errSave
Polarization Holes as an Indicator of Magnetic Field-Angular Momentum Alignment. I. Initial Tests
errASTROPHYSICAL JOURNAL
IF5.4
err2024-05-10
err0
errOAAI
errWang, Lijun; Cao, Zhuo; Fan, Xiaodan; Li, Hua-bai
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errSave
Family-Specific Training Improves Linear B Cell Epitope Prediction for Emerging Viruses
errIEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS
IF3.4
err2023-11-01
err2
PREAI
errLiu, Ran; Hu, Ye-Fan; Du, Jin; Zhang, Bao-Zhong; Yau, Thomas; Fan, Xiaodan; Huang, Jian-Dong
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errSave
Baveno VII criteria for recompensation predict transplant-free survival in patients with hepatitis B-related decompensated cirrhosis
errJHEP REPORTS
IF7.5
err2023-09-01
err6
errOAAI
errHui, Vicki Wing-Ki; Wong, Grace Lai -Hung; Wong, Vincent Wai-Sun; Chan, Henry Lik-Yuen; Lai, Jimmy Che-To; Lai, Mandy Sze -Man; Yam, Tsz-Fai; Li, Dongrong; Fan, Xiaodan; Yip, Terry Cheuk-Fung
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errSave
A Bayesian approach to estimate MHC-peptide binding threshold
errBRIEFINGS IN BIOINFORMATICS
IF7.7
err2023-06-02
err0
PREAI
errLiu, Ran; Hu, Ye-Fan; Huang, Jian-Dong; Fan, Xiaodan
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errSave
Identification of a Common Variant for Coronary Heart Disease at PDE1A Contributes to Individualized Treatment Goals and Risk Stratification of Cardiovascular Complications in Chinese Patients With Type 2 Diabetes
errDIABETES CARE
IF16.6
err2023-05-01
err4
errOAAI
errTam, Claudia H. T.; Lim, Cadmon K. P.; Luk, Andrea O. Y.; Shi, Mai; Cheung, Hoi Man; Ng, Alex C. W.; Lee, Heung-man; Lau, Eric S. H.; Fan, Baoqi; Jiang, Guozhi; Kong, Alice P. S.; Ozaki, Risa; Chow, Elaine Y. K.; Lee, Ka Fai; Siu, Shing Chung; Hui, Grace; Tsang, Chiu Chi; Lau, Kam Piu; Leung, Jenny Y. Y.; Cheung, Elaine Y. N.; Tsang, Man Wo; Kam, Grace; Lau, Ip Tim; Li, June K. Y.; Yeung, Vincent T. F.; Lau, Emmy; Lo, Stanley; Fung, Samuel; Cheng, Yuk Lun; Chow, Chun Chung; Fan, Xiaodan; Chan, Ting Fung; Yip, Kevin Y. L.; Lok, Si; Yu, Weichuan; Tsui, Stephen K. W.; Lan, Hui-Yao; Szeto, Cheuk Chun; Tang, Nelson L. S.; Tomlinson, Brian; Huang, Yu; Jenkins, Alicia J.; Keech, Anthony; So, Wing-Yee; Chan, Juliana C. N.; Ma, Ronald C. W.
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errSave
Revealing Free Energy Landscape From MD Data via Conditional Angle Partition Tree
errIEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS
IF3.4
err2023-03-01
err0
errOAAI
errJiang, Hangjin; Li, Han; Wong, Wing Hung; Fan, Xiaodan
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errSave
A Bayesian model for identifying cancer subtypes from paired methylation profiles
errBRIEFINGS IN BIOINFORMATICS
IF7.7
err2022-12-28
err0
errOAAI
errFan, Yetian; Chan, April S.; Zhu, Jun; Leung, Suet Yi; Fan, Xiaodan
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errSave
Exhaustive Cross-Linking Search with Protein Feedback
errJOURNAL OF PROTEOME RESEARCH
IF3.6
err2022-12-08
err5
errOAAI
errZhou, Chen; Dai, Shuaijian; Lin, Yuanqiao; Lian, Sheng; Fan, Xiaodan; Li, Ning; Yu, Weichuan
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errSave
miR-2682-3p antagonizes its host lncRNA-MIR137HG by interacting with the same target FUS to regulate the progression of gastric cancer (vol 22, 689, 2022)
errBMC CANCER
IF3.4
err2022-11-29
err0
errOAAI
errDu, Yantao; Chen, Yichen; Wu, Tao; Fan, Xiaodan; Lin, Wei; Jiang, Zhouhua
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errSave

Research Directions

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Co-authors
Cooperation Journals
H
Hans Clevers
H-index: 236 · Papers: 1.3K
M
Mark Gerstein
H-index: 191 · Papers: 1.2K
T
Tak W. Mak
H-index: 181 · Papers: 1.6K
V
Vincent Wai‐Sun Wong
H-index: 142 · Papers: 1.2K
Q
Qiang Yang
H-index: 127 · Papers: 1.4K
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