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Matthew Cooke

baylor college of medicine

12H-index
36Paper Count
935Citation Count
Published Papers 17
Publication Date
Antibiotics stimulate protein transfer to persister cells
errScience
IF45.8
err2026-06-25
err0
PREAI
errAlice X. Wen; Julia Bos; Debojyoti Panda; Katelin M. Hagstrom; Shubham Singh; Shrawan Kumar Mageswaran; Xiaoli Wang; Bo Hu; Kobie T. Welch; Matthew B. Cooke; Jennifer A. Halliday; Laura Deus Ramirez; Antoinette E. Martinez; Yi-Wei Chang; David A. Weitz; Christophe Herman
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Transcription-replication collisions trigger high-fidelity replication reset
err2025-12-11
err0
PREAI
errCooke, Matthew B.; Welch, Kobie T.; Deus ramirez, Laura; Hagstrom, Katelin M.; Wen, Alice X.; Halliday, Jennifer A.; Rosenberg, Susan M.; Herman, Christophe
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Chemical modulation of gut bacterial metabolism induces colanic acid and extends the lifespan of nematode and mammalian hosts
err2025-11-01
err0
PREAI
errHu, Guo; Savini, Marzia; Cooke, Matthew Brandon; Wei, Xin; Deng, Dinghuan; Gao, Shihong M.; Xia, Ruyue Alps; Guan, Youchen; Wen, Alice X.; Yu, Xin; Wang, Jin; Jiang, Chao; Herman, Christophe; Li, Jiefu; Wang, Meng C.
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Endogenous DNA damage at sites of terminated transcripts
errNATURE
IF48.5
err2025-02-19
err0
PREAI
errLiu, Jingjing; Perren, Jullian O.; Rogers, Cody M.; Nimer, Sadeieh; Wen, Alice X.; Halliday, Jennifer A.; Fitzgerald, Devon M.; Mei, Qian; Nehring, Ralf B.; Crum, Mary; Kozmin, Stanislav G.; Xia, Jun; Cooke, Matthew B.; Zhai, Yin; Bates, David; Li, Lei; Hastings, P. J.; Artsimovitch, Irina; Herman, Christophe; Sung, Patrick M.; Miller, Kyle M.; Rosenberg, Susan M.
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GoldenBraid2.0 E. coli: a comprehensive and characterized toolkit for enterics
err2025-01-01
err1
errOAAI
errCooke, Matthew B.; Welch, Kobie T.; Ramirez, Laura D.; Wen, Alice X.; Marciano, David C.; Herman, Christophe
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Intermittent fasting and continuous energy restriction result in similar changes in body composition and muscle strength when combined with a 12 week resistance training program
err2022-01-27
err9
errOAAI
errKeenan, Stephen J.; Cooke, Matthew B.; Hassan, Ebrahim Bani; Chen, Won Sun; Sullivan, Josef; Wu, Sam X.; El-Ansary, Doa; Imani, Mahdi; Belski, Regina
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Higher habitual dietary flavonoid intake associates with lower central blood pressure and arterial stiffness in healthy older adults
err2021-08-23
err7
PREAI
errParmenter, Benjamin H.; Croft, Kevin D.; Cribb, Lachlan; Cooke, Matthew B.; Bondonno, Catherine P.; Lea, Ana; McPhee, Grace M.; Komanduri, Mrudhula; Nolidin, Karen; Savage, Karen; Pase, Matthew P.; Hodgson, Jonathan M.; Stough, Con; Bondonno, Nicola P.
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Comprehensive Genomic Profiling of Adult Renal Sarcomas Provides Insight into Disease Biology and Opportunities for Targeted Therapies
err2021-04-01
err5
PREAI
errYakirevich, Evgeny; Madison, Russell; Fridman, Eduard; Mangray, Shamlal; Carneiro, Benedito A.; Lu, Shaolei; Cooke, Matthew; Bratslavsky, Gennady; Webster, Jennifer; Ross, Jeffrey S.; Ali, Siraj M.
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Genomic profiling reveals high frequency of DNA repair genetic aberrations in gallbladder cancer
err2020-12-16
err24
errOAAI
errAbdel-Wahab, Reham; Yap, Timothy A.; Madison, Russell; Pant, Shubham; Cooke, Matthew; Wang, Kai; Zhao, Haitao; Bekaii-Saab, Tanios; Karatas, Elif; Kwong, Lawrence N.; Meric-Bernstam, Funda; Borad, Mitesh; Javle, Milind
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Comprehensive characterization of RAS mutations in colon and rectal cancers in old and young patients
err2019-08-19
err162
errOAAI
errSerebriiskii, Ilya G.; Connelly, Caitlin; Frampton, Garrett; Newberg, Justin; Cooke, Matthew; Miller, Vince; Ali, Siraj; Ross, Jeffrey S.; Handorf, Elizabeth; Arora, Sanjeevani; Lieu, Christopher; Golemis, Erica A.; Meyer, Joshua E.
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Serial profiling of ctDNA identifies clinically actionable genomic evolution in high-risk neuroblastoma
err2019-07-01
err0
PREAI
errBosse, Kristopher R.; Buongervino, Samantha; Lane, Maria; Hyman, Adam; Gemino-borromeo, Maria; Saggio, Jennifer; Fitzsimmons, Alana; Forcier, Brady; Murphy, Anne; Wick, John; Cooke, Matthew; Webster, Jennifer; Madison, Russell; Welsh, Alley; Miller, Vincent A.; Ali, Siraj M.; Maris, John M.; Mosse, Yael P.
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CoQ10 and Cognition a Review and Study Protocol for a 90-Day Randomized Controlled Trial Investigating the Cognitive Effects of Ubiquinol in the Healthy Elderly
err2019-05-29
err11
errOAAI
errStough, Con; Nankivell, Madeleine; Camfield, David A.; Perry, Naomi L.; Pipingas, Andrew; Macpherson, Helen; Wesnes, Keith; Ou, Ruchong; Hare, David; de Haan, Judy; Head, Geoffrey; Lansjoen, Peter; Langsjoen, Alena; Tan, Brendan; Pase, Matthew P.; King, Rebecca; Rowsell, Renee; Zwalf, Oliver; Rathner, Yossi; Cooke, Matthew; Rosenfeldt, Franklin
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Comprehensive genetic alteration profiling in primary and recurrent glioblastoma
err2018-12-09
err26
PREAI
errNeilsen, Beth K.; Sleightholm, Richard; McComb, Rodney; Ramkissoon, Shakti H.; Ross, Jeffrey S.; Corona, Robert J.; Miller, Vincent A.; Cooke, Matthew; Aizenberg, Michele R.
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Clinical utility of tumor genomic profiling in patients with high plasma circulating tumor DNA burden or metabolically active tumors
err2018-11-06
err25
errOAAI
errZhou, Cathy; Yuan, Zilong; Ma, Weijie; Qi, Lihong; Mahavongtrakul, Angelique; Li, Ying; Li, Hong; Gong, Jay; Fan, Reggie R.; Li, Jin; Molmen, Michael; Clark, Travis A.; Pavlick, Dean; Frampton, Garrett M.; Forcier, Brady; Moore, Elizabeth H.; Shelton, David K.; Cooke, Matthew; Ali, Siraj M.; Miller, Vincent A.; Gregg, Jeffrey P.; Stephens, Philip J.; Li, Tianhong
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Intermittent Fasting with or without Exercise Prevents Weight Gain and Improves Lipids in Diet-Induced Obese Mice
err2018-03-12
err47
errOAAI
errWilson, Robin A.; Deasy, William; Stathis, Christos G.; Hayes, Alan; Cooke, Matthew B.
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Collapsin response mediator protein 3 deacetylates histone H4 to mediate nuclear condensation and neuronal death
err2013-02-27
err21
errOAAI
errHou, Sheng T.; Jiang, Susan X.; Aylsworth, Amy; Cooke, Matthew; Zhou, Lei
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