Not logged inSingle-cell profiling reveals a role for tuberculosis-induced myofibroblasts in the immunopathology of infected lungs
Liu, Nuo; Mbano, Ian Maheti; Wardsworth, Marc; Chambers, Mark; Mpotje, Thabo; Asowata, Osaretin; Nyquist, Sarah; Nargan, Kievershen; Ramsuran, Duran; Karim, Farina; Hughes, Travis; Bromley, Joshua; Krause, Robert; Tezera, Liku; Reichmann, Michaela; Keanne, Sharie; Ganchua, C.; Kloverpris, Henrik; Dullabh, Kaylesh; Madansein, Rajhmun; Triana, Sergio; Steyn, Adrie; Berger, Bonnie; Marakalala, Mohlopheni; Fortune, Sarah; Flynn, Joanne L.; Elkington, Paul T.; Shalek, Alex K.; Leslie, Alasdair .png)
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SaveShare Save Scalable, compressed phenotypic screening using pooled perturbationsLiu, Nuo; Kattan, Walaa E.; Mead, Benjamin E.; Kummerlowe, Conner; Cheng, Thomas; Ingabire, Sarah; Cheah, Jaime H.; Soule, Christian K.; Vrcic, Anita; Mcininch, Jane K.; Triana, Sergio; Guzman, Manuel; Dao, Tyler T.; Peters, Joshua M.; Lowder, Kristen E.; Crawford, Lorin; Amini, Ava P.; Blainey, Paul C.; Hahn, William C.; Cleary, Brian; Bryson, Bryan; Winter, Peter S.; Raghavan, Srivatsan; Shalek, Alex K. Share Save Single-cell division tracing and transcriptomics reveal cell types and differentiation paths in the regenerating lungMartins, Leila R.; Sieverling, Lina; Michelhans, Michelle; Schiller, Chiara; Erkut, Cihan; Gruenewald, Thomas G. P.; Triana, Sergio; Froehling, Stefan; Velten, Lars; Glimm, Hanno; Scholl, Claudia Share Save Natural history of Ebola virus disease in rhesus monkeys shows viral variant emergence dynamics and tissue-specific host responsesNormandin, Erica; Triana, Sergio; Raju, Siddharth S.; Lan, Tammy C. T.; Lagerborg, Kim; Rudy, Melissa; Adams, Gordon C.; DeRuff, Katherine C.; Logue, James; Liu, David; Strebinger, Daniel; Rao, Arya; Messer, Katelyn S.; Sacks, Molly; Adams, Ricky D.; Janosko, Krisztina; Kotliar, Dylan; Shah, Rickey; Crozier, Ian; Rinn, John L.; Mele, Marta; Honko, Anna N.; Zhang, Feng; Babadi, Mehrtash; Luban, Jeremy; Bennett, Richard S.; Shalek, Alex K.; Barkas, Nikolaos; Lin, Aaron E.; Hensley, Lisa E.; Sabeti, Pardis C.; Siddle, Katherine J. Share Save A model for network-based identification and pharmacological targeting of aberrant, replication-permissive transcriptional programs induced by viral infectionLaise, Pasquale; Stanifer, Megan; Bosker, Gideon; Sun, Xiaoyun; Triana, Sergio; Doldan, Patricio; La Manna, Federico; De Menna, Marta; Realubit, Ronald; Pampou, Sergey; Karan, Charles; Alexandrov, Theodore; Kruithof-de Julio, Marianna; Califano, Andrea; Boulant, Steeve; Alvarez, Mariano Share Save Mapping the epithelial-immune cell interactome upon infection in the gut and the upper airwaysPoletti, Martina; Treveil, Agatha; Csabai, Luca; Gul, Leila; Modos, Dezso; Madgwick, Matthew; Olbei, Marton; Bohar, Balazs; Valdeolivas, Alberto; Turei, Denes; Verstockt, Bram; Triana, Sergio; Alexandrov, Theodore; Saez-Rodriguez, Julio; Stanifer, Megan L.; Boulant, Steeve; Korcsmaros, Tamas Share Save SARS-CoV-2 infects the human kidney and drives fibrosis in kidney organoidsJansen, Jitske; Reimer, Katharina C.; Nagai, James S.; Varghese, Finny S.; Overheul, Gijs J.; de Beer, Marit; Roverts, Rona; Daviran, Deniz; Fermin, Liline A. S.; Willemsen, Brigith; Beukenboom, Marcel; Djudjaj, Sonja; von Stillfried, Saskia; van Eijk, Larissa E.; Mastik, Mirjam; Bulthuis, Marian; den Dunnen, Wilfred; van Goor, Harry; Hillebrands, Jan-Luuk; Triana, Sergio H.; Alexandrov, Theodore; Timm, Marie-Cherelle; van den Berge, Bartholomeus T.; van den Broek, Martijn; Nlandu, Quincy; Heijnert, Joelle; Bindels, Eric M. J.; Hoogenboezem, Remco M.; Mooren, Fieke; Kuppe, Christoph; Miesen, Pascal; Grunberg, Katrien; Ijzermans, Ties; Steenbergen, Eric J.; Czogalla, Jan; Schreuder, Michiel F.; Sommerdijk, Nico; Akiva, Anat; Boor, Peter; Puelles, Victor G.; Floege, Juergen; Huber, Tobias B.; van Rij, Ronald P.; Costa, Ivan G.; Schneider, Rebekka K.; Smeets, Bart; Kramann, Rafael Share Save Single-cell proteo-genomic reference maps of the hematopoietic system enable the purification and massive profiling of precisely defined cell statesTriana, Sergio; Vonficht, Dominik; Jopp-Saile, Lea; Raffel, Simon; Lutz, Raphael; Leonce, Daniel; Antes, Magdalena; Hernandez-Malmierca, Pablo; Ordonez-Rueda, Diana; Ramasz, Beata; Boch, Tobias; Jann, Johann-Christoph; Nowak, Daniel; Hofmann, Wolf-Karsten; Mueller-Tidow, Carsten; Huebschmann, Daniel; Alexandrov, Theodore; Benes, Vladimir; Trumpp, Andreas; Paulsen, Malte; Velten, Lars; Haas, Simon Share Save Single-cell transcriptomics reveals immune response of intestinal cell types to viral infectionTriana, Sergio; Stanifer, Megan L.; Metz-Zumaran, Camila; Shahraz, Mohammed; Mukenhirn, Markus; Kee, Carmon; Serger, Clara; Koschny, Ronald; Ordonez-Rueda, Diana; Paulsen, Malte; Benes, Vladimir; Boulant, Steeve; Alexandrov, Theodore Share Save Share Save Single-cell analyses reveal SARS-CoV-2 interference with intrinsic immune response in the human gutTriana, Sergio; Metz-Zumaran, Camila; Ramirez, Carlos; Kee, Carmon; Doldan, Patricio; Shahraz, Mohammed; Schraivogel, Daniel; Gschwind, Andreas R.; Sharma, Ashwini K.; Steinmetz, Lars M.; Herrmann, Carl; Alexandrov, Theodore; Boulant, Steeve; Stanifer, Megan L. Share Save Critical Role of Type III Interferon in Controlling SARS-CoV-2 Infection in Human Intestinal Epithelial CellsStanifer, Megan L.; Kee, Carmon; Cortese, Mirko; Zumaran, Camila Metz; Triana, Sergio; Mukenhirn, Markus; Kraeusslich, Hans-Georg; Alexandrov, Theodore; Bartenschlager, Ralf; Boulant, Steeve Share Save Share Save Share Save 
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