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Uncovering NK cell sabotage in gut diseases via single cell transcriptomics Lee, Hansong; Ko, Dai Sik; Heo, Hye Jin; Baek, Seung Eun; Kim, Eun Kyoung; Kwon, Eun Jung; Kang, Junho; Yu, Yeuni; Baryawno, Ninib; Kim, Kihun Share Save
Genomic tumor evolution dictates human medulloblastoma progression Ruchiy, Yana; Tsea, Ioanna; Preka, Efthalia; Verhoeven, Bronte Manouk; Olsen, Thale Kristin; Mei, Shenglin; Sinha, Indranil; Blomgren, Klas; Carlson, Lena-Maria; Dyberg, Cecilia; Johnsen, John Inge; Baryawno, Ninib Share Save
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Joint single-cell genetic and transcriptomic analysis reveal pre-malignant SCP-like subclones in human neuroblastoma Olsen, Thale K.; Otte, Jorg; Mei, Shenglin; Embaie, Bethel Tesfai; Kameneva, Polina; Cheng, Huaitao; Gao, Teng; Zachariadis, Vasilios; Tsea, Ioanna; Bjorklund, Asa; Kryukov, Emil; Hou, Ziyi; Johansson, Anna; Sundstrom, Erik; Martinsson, Tommy; Fransson, Susanne; Stenman, Jakob; Fard, Shahrzad Shirazi; Johnsen, John Inge; Kogner, Per; Adameyko, Igor; Enge, Martin; Kharchenko, Peter V.; Baryawno, Ninib Share Save
Single-cell analysis of immune and stroma cell remodeling in renal cell carcinoma primary tumors and bone metastatic lesions Mei, Shenglin; Alchahin, Adele M.; Tsea, Ioanna; Kfoury, Youmna; Taghreed, Taghreed; Sarkar, Hirak; Wu, Shulin; Subtelny, Alexander O.; Zhang, Yida; Salari, Keyan; Wu, Chin-Lee; Randolph, Mark A.; Scadden, David T.; Dahl, Douglas; Shin, John; Kharchenko, Peter; Saylor, Philip; Sykes, David; Baryawno, Ninib Share Save
Dissecting the immune suppressive human prostate tumor microenvironment via integrated single-cell and spatial transcriptomic analyses Hirz, Taghreed; Mei, Shenglin; Sarkar, Hirak; Kfoury, Youmna; Wu, Shulin; Verhoeven, Bronte M.; Subtelny, Alexander O.; Zlatev, Dimitar V.; Wszolek, Matthew W.; Salari, Keyan; Murray, Evan; Chen, Fei; Macosko, Evan Z.; Wu, Chin-Lee; Scadden, David T.; Dahl, Douglas M.; Baryawno, Ninib; Saylor, Philip J.; Kharchenko, Peter V.; Sykes, David B. Share Save
Role of reactive oxygen species in regulating 27-hydroxycholesterol-induced apoptosis of hematopoietic progenitor cells and myeloid cell lines Woo, Soo-Yeon; Lee, Hansong; Park, Su Min; Choi, Hee-Seon; Kim, Jayoung; Kwon, Munju; Sohn, Jihyung; Nam, Ji Ho; Kim, Hyung-Sik; Song, Parkyong; Baryawno, Ninib; Kim, Yun-Hak; Kim, Koanhoi; Lee, Dongjun Share Save
A transcriptional metastatic signature predicts survival in clear cell renal cell carcinoma Alchahin, Adele M.; Mei, Shenglin; Tsea, Ioanna; Hirz, Taghreed; Kfoury, Youmna; Dahl, Douglas; Wu, Chin-Lee; Subtelny, Alexander O.; Wu, Shulin; Scadden, David T.; Shin, John H.; Saylor, Philip J.; Sykes, David B.; Kharchenko, Peter V.; Baryawno, Ninib Share Save
Stress-Induced Changes in Bone Marrow Stromal Cell Populations Revealed through Single-Cell Protein Expression Mapping Severe, Nicolas; Karabacak, Nezihi Murat; Gustafsson, Karin; Baryawno, Ninib; Courties, Gabriel; Kfoury, Youmna; Kokkaliaris, Konstantinos D.; Rhee, Catherine; Lee, Dongjun; Scadden, Elizabeth W.; Garcia-Robledo, Juan Esteban; Brouse, Thomas; Nahrendorf, Matthias; Toner, Mehmet; Scadden, David T. Share Save
Modulating Bone Marrow Hematopoietic Lineage Potential to Prevent Bone Metastasis in Breast Cancer Ubellacker, Jessalyn M.; Baryawno, Ninib; Severe, Nicolas; DeCristo, Molly J.; Sceneay, Jaclyn; Hutchinson, John N.; Haider, Marie-Therese; Rhee, Catherine S.; Qin, Yuanbo; Gregory, Walter M.; Garrido-Castro, Ana C.; Holen, Ingunn; Brown, Janet E.; Coleman, Robert E.; Scadden, David T.; McAllister, Sandra S. Share Save
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Bone marrow drives central nervous system regeneration after radiation injury (vol 128, pg 281, 2018) Dietrich, Jorg; Baryawno, Ninib; Nayyar, Naema; Valtis, Yannis K.; Yang, Betty; Ly, Ina; Besnard, Antoine; Severe, Nicolas; Gustafsson, Karin U.; Andronesi, Ovidiu C.; Batchelor, Tracy T.; Sahay, Amar; Scadden, David T. Share Save
Bone marrow drives central nervous system regeneration after radiation injury Dietrich, Jorg; Baryawno, Ninib; Nayyar, Naema; Valtis, Yannis K.; Yang, Betty; Ly, Ina; Besnard, Antoine; Severe, Nicolas; Gustafsson, Karin U.; Andronesi, Ovidiu C.; Batchelor, Tracy T.; Sahay, Amar; Scadden, David T. Share Save
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Amino acid-insensitive mTORC1 regulation enables nutritional stress resilience in hematopoietic stem cells Kalaitzidis, Demetrios; Lee, Dongjun; Efeyan, Alejo; Kfoury, Youmna; Nayyar, Naema; Sykes, David B.; Mercier, Francois E.; Papazian, Ani; Baryawno, Ninib; Victora, Gabriel D.; Neuberg, Donna; Sabatini, David M.; Scadden, David T. Share Save
Proximity-Based Differential Single-Cell Analysis of the Niche to Identify Stem/Progenitor Cell Regulators Silberstein, Lev; Goncalves, Kevin A.; Kharchenko, Peter V.; Turcotte, Raphael; Kfoury, Youmna; Mercier, Francois; Baryawno, Ninib; Severe, Nicolas; Bachand, Jacqueline; Spencer, Joel A.; Papazian, Ani; Lee, Dongjun; Chitteti, Brahmananda Reddy; Srour, Edward F.; Hoggatt, Jonathan; Tate, Tiffany; Lo Celso, Cristina; Ono, Noriaki; Nutt, Stephen; Heino, Jyrki; Sipila, Kalle; Shioda, Toshihiro; Osawa, Masatake; Lin, Charles P.; Hu, Guo-fu; Scadden, David T. Share Save
Wnt/β-catenin pathway regulates MGMT gene expression in cancer and inhibition of Wnt signalling prevents chemoresistance Wickstrom, Malin; Dyberg, Cecilia; Milosevic, Jelena; Einvik, Christer; Calero, Raul; Sveinbjornsson, Baldur; Sanden, Emma; Darabi, Anna; Siesjo, Peter; Kool, Marcel; Kogner, Per; Baryawno, Ninib; Johnsen, John Inge Share Save
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