arrow
Back
B

B. Franklin Pugh

cornell university

66H-index
160Paper Count
1.8WCitation Count
Published Papers 62
Publication Date
Genome-wide rotational and translational phasing of nucleosomes with human transcription factors
err2026-07-02
err0
PREAI
errHaining Chen; Jordan E. Krebs; Olivia W. Lang; Jiayi Hu; Devin C. Mellini; Judith Hyle; Chunliang Li; William K.M. Lai; B. Franklin Pugh
errShare
errSave
GenoPipe: identifying the genotype of origin within (epi)genomic datasets
err2023-11-02
err0
errOAAI
errLang, Olivia W.; Srivastava, Divyanshi; Pugh, B. Franklin; Lai, William K. M.
errShare
errSave
NELF and GAGA factor are linked to promoter-proximal pausing at many genes in Drosophila
err2023-03-27
err228
errOAAI
errLee, Chanhyo; Li, Xiaoyong; Hechmer, Aaron; Eisen, Michael; Biggin, Mark D.; Venters, Bryan J.; Jiang, Cizhong; Li, Jian; Pugh, B. Franklin; Gilmour, David S.
errShare
errSave
Genome-Wide Transcriptional Dependence on Conserved Regions of Mot1
err2023-03-20
err6
errOAAI
errVenters, Bryan J.; Irvin, Jordan D.; Gramlich, Paul; Pugh, B. Franklin
errShare
errSave
The Linker Histone Plays a Dual Role during Gametogenesis in Saccharomyces cerevisiae
err2023-03-20
err29
errOAAI
errBryant, Jessica M.; Govin, Jerome; Zhang, Liye; Donahue, Greg; Pugh, B. Franklin; Berger, Shelley L.
errShare
errSave
Genome-Wide Organization of GATA1 and TAL1 Determined at High Resolution
err2023-03-18
err43
errOAAI
errHan, G. Celine; Vinayachandran, Vinesh; Bataille, Alain R.; Park, Bongsoo; Chan-Salis, Ka Yim; Keller, Cheryl A.; Long, Maria; Mahony, Shaun; Hardison, Ross C.; Pugh, B. Franklin
errShare
errSave
PEGR: a flexible management platform for reproducible epigenomic and genomic research
err2022-04-19
err2
errOAAI
errShao, Danying; Kellogg, Gretta D.; Nematbakhsh, Ali; Kuntala, Prashant K.; Mahony, Shaun; Pugh, B. Franklin; Lai, William K. M.
errShare
errSave
Ssl2/TFIIH function in transcription start site scanning by RNA polymerase II in Saccharomyces cerevisiae
err2021-10-15
err6
errOAAI
errZhao, Tingting; Vvedenskaya, Irina O.; Lai, William K. M.; Basu, Shrabani; Pugh, B. Franklin; Nickels, Bryce E.; Kaplan, Craig D.
errShare
errSave
A ChIP-exo screen of 887 Protein Capture Reagents Program transcription factor antibodies in human cells
err2021-08-23
err12
errOAAI
errLai, William K. M.; Mariani, Luca; Rothschild, Gerson; Smith, Edwin R.; Venters, Bryan J.; Blanda, Thomas R.; Kuntala, Prashant K.; Bocklund, Kylie; Mairose, Joshua; Dweikat, Sarah N.; Mistretta, Katelyn; Rossi, Matthew J.; James, Daniela; Anderson, James T.; Phanor, Sabrina K.; Zhang, Wanwei; Zhao, Zibo; Shah, Avani P.; Novitzky, Katherine; McAnarney, Eileen; Keogh, Michael-C; Shilatifard, Ali; Basu, Uttiya; Bulyk, Martha L.; Pugh, B. Franklin
errShare
errSave
Acute stress drives global repression through two independent RNA polymerase II stalling events in Saccharomyces
err2021-01-01
err11
errOAAI
errBadjatia, Nitika; Rossi, Matthew J.; Bataille, Alain R.; Mittal, Chitvan; Lai, William K. M.; Pugh, B. Franklin
errShare
errSave
Actin R256 Mono-methylation Is a Conserved Post-translational Modification Involved in Transcription
err2020-09-01
err9
errOAAI
errKumar, Ashok; Zhong, Yuan; Albrecht, Amelie; Sang, Pau Biak; Maples, Adrian; Liu, Zhenan; Vinayachandran, Vinesh; Reja, Rohit; Lee, Chia-Fang; Kumar, Ashutosh; Chen, Jiyuan; Xiao, Jing; Park, Bongsoo; Shen, Jianjun; Liu, Bin; Person, Maria D.; Trybus, Kathleen M.; Zhang, Kam Y. J.; Pugh, B. Franklin; Kamm, Kristine E.; Milewicz, Dianna M.; Shen, Xuetong; Kapoor, Prabodh
errShare
errSave
Alignment and quantification of ChIP-exo crosslinking patterns reveal the spatial organization of protein-DNA complexes
err2020-08-04
err2
errOAAI
errYamada, Naomi; Rossi, Matthew J.; Farrell, Nina; Pugh, B. Franklin; Mahony, Shaun
errShare
errSave
Universal promoter scanning by Pol II during transcription initiation in Saccharomyces cerevisiae
err2020-06-02
err37
errOAAI
errQiu, Chenxi; Jin, Huiyan; Vvedenskaya, Irina; Llenas, Jordi Abante; Zhao, Tingting; Malik, Indranil; Visbisky, Alex M.; Schwartz, Scott L.; Cui, Ping; Cabart, Pavel; Han, Kang Hoo; Lai, William K. M.; Metz, Richard P.; Johnson, Charles D.; Sze, Sing-Hoi; Pugh, B. Franklin; Nickels, Bryce E.; Kaplan, Craig D.
errShare
errSave
In vivo genome-wide binding interactions of mouse and human constitutive androstane receptors reveal novel gene targets
err2018-08-08
err27
errOAAI
errNiu, Ben; Coslo, Denise M.; Bataille, Alain R.; Albert, Istvan; Pugh, B. Franklin; Omiecinski, Curtis J.
errShare
errSave
Simplified ChIP-exo assays
err2018-07-20
err71
errOAAI
errRossi, Matthew J.; Lai, William K. M.; Pugh, B. Franklin
errShare
errSave