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Transmission of carbapenemase-producing Enterobacter in Ontario, Canada: a retrospective genomic analysis Izydorczyk, Conrad; Lee, Robyn; Mataseje, Laura; Golding, George R.; Edge, Thomas A.; Boyd, Rachel; Braukmann, Tom; Carroll, Amanda; Katz, Kevin; Kozak, Robert; Jamal, Alainna J.; MacFadden, Derek R.; Mazzulli, Tony; Melano, Roberto; Mubareka, Samira; Patel, Samir; Poutanen, Susan M.; Richardson, David; Waglechner, Nicholas; McGeer, Allison Share Save
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Incidence of Respiratory Syncytial Virus-Associated Hospitalization Among Adults in Ontario, Canada, 2017-2019 Buchan, Sarah A.; Alessandrini, Jenna; Drover, Samantha S. M.; Andrew, Melissa K.; Bronskill, Susan E.; Brown, Kevin A.; Daneman, Nick; Deeks, Shelley L.; Gubbay, Jonathan B.; Johnstone, Jennie; Karnauchow, Timothy M.; Lee, Samantha; Mcgeer, Allison J.; Mcnally, J. Dayre; Mcneil, Shelly A.; Mubareka, Samira; Murti, Michelle; Smieja, Marek; Wilson, Sarah E.; Kwong, Jeffrey C. Share Save
Detection by Nasopharyngeal Swabs Alone Underestimates Respiratory Syncytial Virus-Related Hospitalization Incidence in Adults: The Multispecimen Study's Final Analysis Begier, Elizabeth; Aliabadi, Negar; Ramirez, Julio A.; McGeer, Allison; Liu, Qing; Carrico, Ruth; Mubareka, Samira; Uppal, Sonal; Furmanek, Stephen; Zhong, Zoe; Hubler, Robin; Chandler, Thomas R.; Kassee, Caroline; Wilde, Ashley; Katz, Kevin; Peyrani, Paula; Junkins, Alan; Vermeiren, Christie; Kalina, Warren, V; Falsey, Ann R.; Walsh, Edward; Elsobky, Malak; Yacisin, Kari; Gonzalez, Elisa; Jodar, Luis; Gessner, Bradford D. Share Save
Dairy cows develop protective immunity against reinfection with bovine H5N1 influenza virus Facciuolo, Antonio; Aubrey, Lauren; Barron-Castillo, Ulises; Berube, Nathalie; Norleen, Carla; McCreary, Shannon; Huang, Yanyun; Pessoa, Natalia; Jacome, Leslie Macas; Mubareka, Samira; McGeer, Allison; Berhane, Yohannes; Gerdts, Volker; Van Kessel, Andrew; Warner, Bryce; Zhou, Yan Share Save
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Rapid In Vivo Screening of Monoclonal Antibody Cocktails Using Hydrodynamic Delivery of DNA-Encoded Modified Antibodies Fausther-Bovendo, Hugues; Babuadze, George (Giorgi); Ivanciuc, Teodora; Kalveram, Birte; Qu, Yue; Choi, Jihae; Mcgeer, Allison; Ostrowski, Mario; Mubareka, Samira; Patel, Ami; Garofalo, Roberto P.; Kozak, Robert; Kobinger, Gary P. Share Save
Vaccination against SARS-CoV-2 provides low-level cross-protection against common cold coronaviruses in mouse and non-human primate animal models Naghibosadat, Maedeh; Babuadze, George Giorgi; Pei, Yanlong; Hurst, Jacklyn; Salvant, Elsa; Gaete, Kayla; Biondi, Mia; Moloo, Badru; Goldstein, Alyssa; Avery, Stacey; Ma, Kathleen; Pietraszek, Anna; Wootton, Sarah K.; Alhaboub, Assad; Martin, Benjamin; Mubareka, Samira; Corredor, Juan; Sultana, Azmiri; Adeekoa, Adebayo; Budylowski, Patrick; Ostrowski, Mario; Chao, Jesse; Nagy, Eva; Kozak, Robert Share Save
Early COVID-19 and protection from Omicron in a highly vaccinated population in Ontario, Canada: a matched prospective cohort study Shigayeva, Altynay; Kandel, Christopher; Farooqi, Lubna; Zhong, Zoe; Gingras, Anne-Claude; Coleman, Brenda L.; Gilbert, Lois; Gold, Wayne L.; Major, Maria; Mazzulli, Tony; Mubareka, Samira; Vojicic, Jelena; Yang, Jingyan; Zhang, Pingping; Martin, Catherine; Kyaw, Moe H.; Mclaughlin, John M.; Mcgeer, Allison Share Save
Identification of patient demographic, clinical, and SARS-CoV-2 genomic factors associated with severe COVID-19 using supervised machine learning: a retrospective multicenter study Nirmalarajah, Kuganya; Aftanas, Patryk; Barati, Shiva; Chien, Emily; Crowl, Gloria; Faheem, Amna; Farooqi, Lubna; Jamal, Alainna J.; Khan, Saman; Kotwa, Jonathon D.; Li, Angel X.; Mozafarihashjin, Mohammad; Nasir, Jalees A.; Shigayeva, Altynay; Yim, Winfield; Yip, Lily; Zhong, Xi Zoe; Katz, Kevin; Kozak, Robert; Mcarthur, Andrew G.; Daneman, Nick; Maguire, Finlay; Mcgeer, Allison J.; Duvvuri, Venkata R.; Mubareka, Samira Share Save
SARS-CoV-2 Illumina GeNome Assembly Line (SIGNAL), a Snakemate workflow for rapid and bulk analysis of Illumina sequencing of SARS-CoV-2 genomes Nasir, Jalees A.; Maguire, Finlay; Smith, Kendrick M.; Panousis, Emily M.; Baker, Sheridan J. C.; Aftanas, Patryk; Raphenya, Amogelang R.; Alcock, Brian P.; Maan, Hassaan; Knox, Natalie C.; Banerjee, Arinjay; Mossman, Karen; Wang, Bo; Simpson, Jared T.; Kozak, Robert A.; Mubareka, Samira; Mcarthur, Andrew G. Share Save
QBox: An Automated Portable System for Multiplex Quantum Dot Barcode Diagnostics Osborne, Matthew; Chen, Hongmin; Kadhiresan, Pranav; Mahbub, Nafisa; Malekjahani, Ayden; Kozlowski, Hannah N.; Udugama, Buddhisha; Nguyen, Luan N. M.; Perusini, Stephen; Mubareka, Samira; Chan, Warren C. W. Share Save
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Multiple transatlantic incursions of highly pathogenic avian influenza clade 2.3.4.4b A(H5N5) virus into North America and spillover to mammals Erdelyan, Cassidy N. G.; Kandeil, Ahmed; Signore, Anthony, V; Jones, Megan E. B.; Vogel, Peter; Andreev, Konstantin; Boe, Cathrine Arnason; Gjerset, Britt; Alkie, Tamiru N.; Yason, Carmencita; Hisanaga, Tamiko; Sullivan, Daniel; Lung, Oliver; Bourque, Laura; Ayilara, Ifeoluwa; Pama, Lemarie; Jeevan, Trushar; Franks, John; Jones, Jeremy C.; Seiler, Jon P.; Miller, Lance; Mubareka, Samira; Webby, Richard J.; Berhane, Yohannes Share Save
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