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Francisco J. Planes

Universidad de Navarra

20H-index
83Paper Count
1.3KCitation Count
Published Papers 24
Publication Date
A myeloid-dormant metabolic transcriptome identifies a poor-prognosis subgroup in hyperdiploid multiple myeloma with targetable vulnerabilities
err2026-08-11
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errNaroa Barrena; Edurne San José-Enériz; Luis V. Valcárcel; Danel Olaverri-Mendizabal; Estibaliz Urizar-Compains; Leire Garate; Estíbaliz Miranda; Paula Rodriguez-Marquez; Romika Kumari; Patxi San Martín-Uriz; Juan Roberto Rodriguez-Madoz; Leonor Puchades-Carrasco; Caroline A. Heckman; Paula Rodriguez-Otero; Francisco J. Planes; Xabier Agirre; Felipe Prósper
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Beyond synthetic lethality in large-scale metabolic and regulatory network models via genetic minimal intervention set
err2026-01-01
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PREAI
errBarrena, Naroa; Rodriguez-Flores, Carlos; Valcarcel, Luis V.; Olaverri-Mendizabal, Danel; Agirre, Xabier; Prosper, Felipe; Planes, Francisco J.
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Development and Validation of a Self-Administered Semiquantitative Food Frequency Questionnaire Focused on Gut Microbiota: The Stance4Health-FFQ
err2024-11-26
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errFormisano, Annarita; Russo, Marika Dello; Russo, Paola; Siani, Alfonso; Hinojosa-Nogueira, Daniel; Navajas-Porras, Beatriz; Toledano-Marin, Angela; Pastoriza, Silvia; Blasco, Telmo; Lerma-Aguilera, Alberto; Francino, Maria Pilar; Planes, Francisco Javier; Gonzalez-Vigil, Veronica; Rufian-Henares, Jose angel; Lauria, Fabio
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BET inhibitors downregulate the expression of the essentiallncRNA SMILO in multiple myeloma through regulation of the transcription factor FLI1
err2024-09-26
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errGomez-Echarte, Nahia; San Jose-Eneriz, Edurne; Carrasco-Leon, Arantxa; Barrena, Naroa; Miranda, Estibaliz; Garate, Leire; Garcia-Torre, Beatriz; Alonso-Moreno, Sandra; Gimenez-Camino, Naroa; Urizar-Compains, Estibaliz; Olaverri-Mendizabal, Danel; Aguirre-Ruiz, Paula; Ariceta, Benat; Tamariz-Amador, Luis-Esteban; Rodriguez-Otero, Paula; Planes, Francisco J.; Belver, Laura; Martin-Subero, Jose Ignacio; Prosper, Felipe; Agirre, Xabier
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Extending PROXIMAL to predict degradation pathways of phenolic compounds in the human gut microbiota
err2024-05-27
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errBalzerani, Francesco; Blasco, Telmo; Perez-Burillo, Sergio; Valcarcel, Luis V.; Hassoun, Soha; Planes, Francisco J.
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Review and meta-analysis of the genetic Minimal Cut Set approach for gene essentiality prediction in cancer metabolism
err2024-03-27
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errOlaverri-Mendizabal, Danel; Valcarcel, Luis V.; Barrena, Naroa; Rodriguez, Carlos J.; Planes, Francisco J.
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Synthetic lethality in large-scale integrated metabolic and regulatory network models of human cells
err2023-07-15
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errBarrena, Naroa; Valcarcel, Luis V. V.; Olaverri-Mendizabal, Danel; Apaolaza, Inigo; Planes, Francisco J. J.
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Prediction of degradation pathways of phenolic compounds in the human gut microbiota through enzyme promiscuity methods
err2022-07-12
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errBalzerani, Francesco; Hinojosa-Nogueira, Daniel; Cendoya, Xabier; Blasco, Telmo; Perez-Burillo, Sergio; Apaolaza, Inigo; Francino, M. Pilar; Rufian-Henares, Jose Angel; Planes, Francisco J.
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The bone marrow niche regulates redox and energy balance in MLL::AF9 leukemia stem cells
errLEUKEMIA
IF13.4
err2022-05-26
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errOAAI
errVinado, Ana C.; Calvo, Isabel A.; Cenzano, Itziar; Olaverri, Danel; Cocera, Miguel; San Martin-Uriz, Patxi; Romero, Juan P.; Vilas-Zornoza, Amaia; Vera, Laura; Gomez-Cebrian, Nuria; Puchades-Carrasco, Leonor; Lisi-Vega, Livia E.; Apaolaza, Inigo; Valera, Pablo; Guruceaga, Elisabeth; Granero-Molto, Froilan; Ripalda-Cemborain, Purificacion; Luck, Tamara J.; Bullinger, Lars; Planes, Francisco J.; Rifon, Jose J.; Mendez-Ferrer, Simon; Yusuf, Rushdia Z.; Pardo-Saganta, Ana; Prosper, Felipe; Saez, Borja
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Landscape and clinical significance of long noncoding RNAs involved in multiple myeloma expressed fusion transcripts
err2022-01-06
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PREAI
errAmundarain, Ane; Valcarcel, Luis V.; Ordonez, Raquel; Garate, Leire; Miranda, Estibaliz; Cendoya, Xabier; Carrasco-Leon, Arantxa; Calasanz, Maria Jose; Paiva, Bruno; Meydan, Cem; Mason, Christopher E.; Melnick, Ari; Rodriguez-Otero, Paula; Martin-Subero, Jose I.; San Miguel, Jesus; Planes, Francisco J.; Prosper, Felipe; Agirre, Xabier
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An extended reconstruction of human gut microbiota metabolism of dietary compounds
err2021-08-05
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errBlasco, Telmo; Perez-Burillo, Sergio; Balzerani, Francesco; Hinojosa-Nogueira, Daniel; Lerma-Aguilera, Alberto; Pastoriza, Silvia; Cendoya, Xabier; Rubio, Angel; Jose Gosalbes, Maria; Jimenez-Hernandez, Nuria; Pilar Francino, M.; Apaolaza, Inigo; Angel Rufian-Henares, Jose; Planes, Francisco J.
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Effect of Freezing on Gut Microbiota Composition and Functionality for In Vitro Fermentation Experiments
err2021-06-27
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errPerez-Burillo, Sergio; Hinojosa-Nogueira, Daniel; Navajas-Porras, Beatriz; Blasco, Telmo; Balzerani, Francesco; Lerma-Aguilera, Alberto; Leon, Daniel; Pastoriza, Silvia; Apaolaza, Inigo; Planes, Francisco J.; Pilar Francino, Maria; Angel Rufian-Henares, Jose
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Gene expression derived from alternative promoters improves prognostic stratification in multiple myeloma
errLEUKEMIA
IF13.4
err2021-05-10
err9
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errValcarcel, Luis V.; Amundarain, Ane; Kulis, Marta; Charalampopoulou, Stella; Melnick, Ari; San Miguel, Jesus; Martin-Subero, Jose, I; Planes, Francisco J.; Agirre, Xabier; Prosper, Felipe
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Computational approach for collection and prediction of molecular initiating events in developmental toxicity
err2020-06-01
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PREAI
errCendoya, Xabier; Quevedo, Celia; Ipinazar, Maitane; Planes, Francisco J.
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Adaptation of the Human Gut Microbiota Metabolic Network During the First Year After Birth
err2019-04-24
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errFuertes, Alvaro; Perez-Burillo, Sergio; Apaolaza, Inigo; Valles, Yvonne; Pilar Francino, M.; Angel Rufian-Henares, Jose; Planes, Francisco J.
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TranscriptAchilles: a genome-wide platform to predict isoform biomarkers of gene essentiality in cancer
err2019-04-03
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errOAAI
errCarazo, Fernando; Campuzano, Lucia; Cendoya, Xabier; Planes, Francisco J.; Rubio, Angel
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CANCERTOOL: A Visualization and Representation Interface to Exploit Cancer Datasets
err2018-11-01
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errCortazar, Ana R.; Torrano, Veronica; Martin-Martin, Natalia; Caro-Maldonado, Alfredo; Camacho, Laura; Hermanova, Ivana; Guruceaga, Elizabeth; Lorenzo-Martin, Luis F.; Caloto, Ruben; Gomis, Roger R.; Apaolaza, Inigo; Quesada, Victor; Trka, Jan; Gomez-Munoz, Antonio; Vincent, Silvestre; Bustelo, Xose R.; Planes, Francisco J.; Aransay, Ana M.; Carracedo, Arkaitz
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In-silico gene essentiality analysis of polyamine biosynthesis reveals APRT as a potential target in cancer
err2017-10-30
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errPey, Jon; San Jose-Eneriz, Edurne; Carmen Ochoa, Maria; Apaolaza, Inigo; de Atauri, Pedro; Rubio, Angel; Cendoya, Xabier; Miranda, Estibaliz; Garate, Leire; Cascante, Marta; Carracedo, Arkaitz; Agirre, Xabier; Prosper, Felipe; Planes, Francisco J.
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An in-silico approach to predict and exploit synthetic lethality in cancer metabolism
err2017-09-06
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errApaolaza, Inigo; San Jose-Eneriz, Edurne; Tobalina, Luis; Miranda, Estibaliz; Garate, Leire; Agirre, Xabier; Prosper, Felipe; Planes, Francisco J.
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Bioinformatic progress and applications in metaproteogenomics for bridging the gap between genomic sequences and metabolic functions in microbial communities
err2013-08-07
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PREAI
errSeifert, Jana; Herbst, Florian-Alexander; Nielsen, Per Halkjaer; Planes, Francisco J.; Jehmlich, Nico; Ferrer, Manuel; von Bergen, Martin
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