Not logged in Prior infection with unrelated neurotropic virus exacerbates influenza disease and impairs lung T cell responses Foo, Isabelle Jia-Hui; Chua, Brendon Y.; Clemens, E. Bridie; Chang, So Young; Jia, Xiaoxiao; McQuilten, Hayley A.; Yap, Ashley Huey Yiing; Cabug, Aira F.; Ashayeripanah, Mitra; McWilliam, Hamish E. G.; Villadangos, Jose A.; Evrard, Maximilien; Mackay, Laura K.; Wakim, Linda M.; Fazakerley, John K.; Kedzierska, Katherine; Kedzierski, Lukasz Share Save
Newborn and child-like molecular signatures in older adults stem from TCR shifts across human lifespan van de Sandt, Carolien E.; Nguyen, Thi H. O.; Gherardin, Nicholas A.; Crawford, Jeremy Chase; Samir, Jerome; Minervina, Anastasia A.; Pogorelyy, Mikhail V.; Rizzetto, Simone; Szeto, Christopher; Kaur, Jasveen; Ranson, Nicole; Sonda, Sabrina; Harper, Alice; Redmond, Samuel J.; McQuilten, Hayley A.; Menon, Tejas; Sant, Sneha; Jia, Xiaoxiao; Pedrina, Kate; Karapanagiotidis, Theo; Cain, Natalie; Nicholson, Suellen; Chen, Zhenjun; Lim, Ratana; Clemens, E. Bridie; Eltahla, Auda; La Gruta, Nicole L.; Crowe, Jane; Lappas, Martha; Rossjohn, Jamie; Godfrey, Dale I.; Thomas, Paul G.; Gras, Stephanie; Flanagan, Katie L.; Luciani, Fabio; Kedzierska, Katherine Share Save
Broad spectrum SARS-CoV-2-specific immunity in hospitalized First Nations peoples recovering from COVID-19 Zhang, Wuji; Clemens, E. Bridie; Kedzierski, Lukasz; Chua, Brendon Y.; Mayo, Mark; Lonzi, Claire; Hinchcliff, Alexandra; Rigas, Vanessa; Middleton, Bianca F.; Binks, Paula; Rowntree, Louise C.; Allen, Lilith F.; Tan, Hyon-Xhi; Petersen, Jan; Chaurasia, Priyanka; Krammer, Florian; Wheatley, Adam K.; Kent, Stephen J.; Rossjohn, Jamie; Miller, Adrian; Lynar, Sarah; Nelson, Jane; Nguyen, Thi H. O.; Davies, Jane; Kedzierska, Katherine Share Save
Robust and prototypical immune responses toward COVID-19 vaccine in First Nations peoples are impacted by comorbidities Zhang, Wuji; Kedzierski, Lukasz; Chua, Brendon Y.; Mayo, Mark; Lonzi, Claire; Rigas, Vanessa; Middleton, Bianca F.; McQuilten, Hayley A.; Rowntree, Louise C.; Allen, Lilith F.; Purcell, Ruth A.; Tan, Hyon-Xhi; Petersen, Jan; Chaurasia, Priyanka; Mordant, Francesca; Pogorelyy, Mikhail V.; Minervina, Anastasia A.; Crawford, Jeremy Chase; Perkins, Griffith B.; Zhang, Eva; Gras, Stephanie; Clemens, E. Bridie; Juno, Jennifer A.; Audsley, Jennifer; Khoury, David S.; Holmes, Natasha E.; Thevarajan, Irani; Subbarao, Kanta; Krammer, Florian; Cheng, Allen C.; Davenport, Miles P.; Grubor-Bauk, Branka; Coates, P. Toby; Christensen, Britt; Thomas, Paul G.; Wheatley, Adam K.; Kent, Stephen J.; Rossjohn, Jamie; Chung, Amy W.; Boffa, John; Miller, Adrian; Lynar, Sarah; Nelson, Jane; Nguyen, Thi H. O.; Davies, Jane; Kedzierska, Katherine Share Save
Robust SARS-CoV-2 T cell responses with common TCRab motifs toward COVID-19 vaccines in patients with hematological malignancy impacting B cells Nguyen, Thi H. O.; Rowntree, Louise C.; Allen, Lilith F.; Chua, Brendon Y.; Kedzierski, Lukasz; Lim, Chhay; Lasica, Masa; Tennakoon, G. Surekha; Saunders, Natalie R.; Crane, Megan; Chee, Lynette; Seymour, John F.; Anderson, Mary Ann; Whitechurch, Ashley; Clemens, E. Bridie; Zhang, Wuji; Chang, So Young; Habel, Jennifer R.; Jia, Xiaoxiao; McQuilten, Hayley A.; Minervina, Anastasia A.; Pogorelyy, Mikhail V.; Chaurasia, Priyanka; Petersen, Jan; Menon, Tejas; Hensen, Luca; Neil, Jessica A.; Mordant, Francesca L.; Tan, Hyon-Xhi; Cabug, Aira F.; Wheatley, Adam K.; Kent, Stephen J.; Subbarao, Kanta; Karapanagiotidis, Theo; Huang, Han; Vo, Lynn K.; Cain, Natalie L.; Nicholson, Suellen; Krammer, Florian; Gibney, Grace; James, Fiona; Trevillyan, Janine M.; Trubiano, Jason A.; Mitchell, Jeni; Christensen, Britt; Bond, Katherine A.; Williamson, Deborah A.; Rossjohn, Jamie; Crawford, Jeremy Chase; Thomas, Paul G.; Thursky, Karin A.; Slavin, Monica A.; Tam, Constantine S.; Teh, Benjamin W.; Kedzierska, Katherine Share Save
VDJdb in the pandemic era: a compendium of T cell receptors specific for SARS-CoV-2 Goncharov, Mikhail; Bagaev, Dmitry; Shcherbinin, Dmitrii; Zvyagin, Ivan; Bolotin, Dmitry; Thomas, Paul G.; Minervina, Anastasia A.; Pogorelyy, Mikhail V.; Ladell, Kristin; McLaren, James E.; Price, David A.; Nguyen, Thi H. O.; Rowntree, Louise C.; Clemens, E. Bridie; Kedzierska, Katherine; Dolton, Garry; Rius, Cristina Rafael; Sewell, Andrew; Samir, Jerome; Luciani, Fabio; Zornikova, Ksenia V.; Khmelevskaya, Alexandra A.; Sheetikov, Saveliy A.; Efimov, Grigory A.; Chudakov, Dmitry; Shugay, Mikhail Share Save
SARS-CoV-2-specific T cell memory with common TCRαβ motifs is established in unvaccinated children who seroconvert after infection Rowntree, Louise C.; Nguyen, Thi H. O.; Kedzierski, Lukasz; Neeland, Melanie R.; Petersen, Jan; Crawford, Jeremy Chase; Allen, Lilith F.; Clemens, E. Bridie; Chua, Brendon; McQuilten, Hayley A.; Minervina, Anastasia A.; Pogorelyy, Mikhail, V; Chaurasia, Priyanka; Tan, Hyon-Xhi; Wheatley, Adam K.; Jia, Xiaoxiao; Amanat, Fatima; Krammer, Florian; Allen, E. Kaitlynn; Sonda, Sabrina; Flanagan, Katie L.; Jumarang, Jaycee; Pannaraj, Pia S.; Licciardi, Paul, V; Kent, Stephen J.; Bond, Katherine A.; Williamson, Deborah A.; Rossjohn, Jamie; Thomas, Paul G.; Tosif, Shidan; Crawford, Nigel W.; van de Sandt, Carolien E.; Kedzierska, Katherine Share Save
T Cell Epitope Discovery in the Context of Distinct and Unique Indigenous HLA Profiles Hensen, Luca; Illing, Patricia T.; Rowntree, Louise C.; Davies, Jane; Miller, Adrian; Tong, Steven Y. C.; Habel, Jennifer R.; van de Sandt, Carolien E.; Flanagan, Katie L.; Purcell, Anthony W.; Kedzierska, Katherine; Clemens, E. Bridie Share Save
HLA-A*11:01-restricted CD8+ T cell immunity against influenza A and influenza B viruses in Indigenous and non-Indigenous people Habel, Jennifer; Nguyen, Andrea; Rowntree, Louise; Szeto, Christopher; Mifsud, Nicole; Clemens, E. Bridie; Loh, Liyen; Chen, Weisan; Rockman, Steve; Nelson, Jane W.; Davies, Jane; Miller, Adrian; Tong, Steven Y. C. T.; Rossjohn, Jamie; Gras, Stephanie M.; Purcell, Anthony; Hensen, Luca M.; Kedzierska, Katherine; Illing, Patricia M. Share Save
Robust and prototypical immune responses toward influenza vaccines in the high-risk group of Indigenous Australians Hensen, Luca; Nguyen, Thi H. O.; Rowntree, Louise C.; Damelang, Timon; Koutsakos, Marios; Aban, Malet; Hurt, Aeron; Harland, Kim L.; Auladell, Maria; van de Sandt, Carolien E.; Everitt, Anngie; Blacker, Cath; Oyong, Damian A.; Loughland, Jessica R.; Webb, Jessica R.; Wines, Bruce D.; Hogarth, P. Mark; Flanagan, Katie L.; Plebanski, Magdalena; Wheatley, Adam; Chung, Amy W.; Kent, Stephen J.; Miller, Adrian; Clemens, E. Bridie; Doherty, Peter C.; Nelson, Jane; Davies, Jane; Tong, Steven Y. C.; Kedzierska, Katherine Share Save
CD8+ T cell landscape in Indigenous and non-Indigenous people restricted by influenza mortality-associated HLA-A*24:02 allomorph Hensen, Luca; Illing, Patricia T.; Bridie Clemens, E.; Nguyen, Thi H. O.; Koutsakos, Marios; van de Sandt, Carolien E.; Mifsud, Nicole A.; Nguyen, Andrea T.; Szeto, Christopher; Chua, Brendon Y.; Halim, Hanim; Rizzetto, Simone; Luciani, Fabio; Loh, Liyen; Grant, Emma J.; Saunders, Phillipa M.; Brooks, Andrew G.; Rockman, Steve; Kotsimbos, Tom C.; Cheng, Allen C.; Richards, Michael; Westall, Glen P.; Wakim, Linda M.; Loudovaris, Thomas; Mannering, Stuart I.; Elliott, Michael; Tangye, Stuart G.; Jackson, David C.; Flanagan, Katie L.; Rossjohn, Jamie; Gras, Stephanie; Davies, Jane; Miller, Adrian; Tong, Steven Y. C.; Purcell, Anthony W.; Kedzierska, Katherine Share Save
Immune cellular networks underlying recovery from influenza virus infection in acute hospitalized patients Nguyen, Thi H. O.; Koutsakos, Marios; van de Sandt, Carolien E.; Crawford, Jeremy Chase; Loh, Liyen; Sant, Sneha; Grzelak, Ludivine; Allen, Emma K.; Brahm, Tim; Clemens, E. Bridie; Auladell, Maria; Hensen, Luca; Wang, Zhongfang; Nussing, Simone; Jia, Xiaoxiao; Gunther, Patrick; Wheatley, Adam K.; Kent, Stephen J.; Aban, Malet; Deng, Yi-Mo; Laurie, Karen L.; Hurt, Aeron C.; Gras, Stephanie; Rossjohn, Jamie; Crowe, Jane; Xu, Jianqing; Jackson, David; Brown, Lorena E.; La Gruta, Nicole; Chen, Weisan; Doherty, Peter C.; Turner, Stephen J.; Kotsimbos, Tom C.; Thomas, Paul G.; Cheng, Allen C.; Kedzierska, Katherine Share Save
Integrated immune dynamics define correlates of COVID-19 severity and antibody responses Koutsakos, Marios; Rowntree, Louise C.; Hensen, Luca; Chua, Brendon Y.; van de Sandt, Carolien E.; Habel, Jennifer R.; Zhang, Wuji; Jia, Xiaoxiao; Kedzierski, Lukasz; Ashhurst, Thomas M.; Putri, Givanna H.; Marsh-Wakefield, Felix; Read, Mark N.; Edwards, Davis N.; Clemens, E. Bridie; Wong, Chinn Yi; Mordant, Francesca L.; Juno, Jennifer A.; Amanat, Fatima; Audsley, Jennifer; Holmes, Natasha E.; Gordon, Claire L.; Smibert, Olivia C.; Trubiano, Jason A.; Hughes, Carly M.; Catton, Mike; Denholm, Justin T.; Tong, Steven Y. C.; Doolan, Denise L.; Kotsimbos, Tom C.; Jackson, David C.; Krammer, Florian; Godfrey, Dale, I; Chung, Amy W.; King, Nicholas J. C.; Lewin, Sharon R.; Wheatley, Adam K.; Kent, Stephen J.; Subbarao, Kanta; McMahon, James; Thevarajan, Irani; Thi H O Nguyen; Cheng, Allen C.; Kedzierska, Katherine Share Save
Challenging immunodominance of influenza-specific CD8+ T cell responses restricted by the risk-associated HLA-A*68:01 allomorph van de Sandt, C. E.; Clemens, E. B.; Grant, E. J.; Rowntree, L. C.; Sant, S.; Halim, H.; Crowe, J.; Cheng, A. C.; Kotsimbos, T. C.; Richards, M.; Miller, A.; Tong, S. Y. C.; Rossjohn, J.; Nguyen, T. H. O.; Gras, S.; Chen, W.; Kedzierska, K. Share Save
TCF-1 limits the formation of Tc17 cells via repression of the MAF-RORγt axis Mielke, Lisa A.; Liao, Yang; Clemens, Ella Bridie; Firth, Matthew A.; Duckworth, Brigette; Huang, Qiutong; Almeida, Francisca F.; Chopin, Michael; Koay, Hui-Fern; Bell, Carolyn A.; Hediyeh-Zadeh, Soroor; Park, Simone L.; Raghu, Dinesh; Choi, Jarny; Putoczki, Tracy L.; Hodgkin, Philip D.; Franks, Ashley E.; Mackay, Laura K.; Godfrey, Dale, I; Davis, Melissa J.; Xue, Hai-Hui; Bryant, Vanessa L.; Kedzierska, Katherine; Shi, Wei; Belz, Gabrielle T. Share Save
Divergent SATB1 expression across human life span and tissue compartments Nussing, Simone; Koay, Hui-Fern; Sant, Sneha; Loudovaris, Thomas; Mannering, Stuart I.; Lappas, Martha; d'Udekem, Yves; Konstantinov, Igor E.; Berzins, Stuart P.; Rimmelzwaan, Guus F.; Turner, Stephen J.; Clemens, E. Bridie; Godfrey, Dale I.; Thi HO Nguyen; Kedzierska, Katherine Share Save
Human CD8+ T cell cross-reactivity across influenza A, B and C viruses Koutsakos, Marios; Illing, Patricia T.; Nguyen, Thi H. O.; Mifsud, Nicole A.; Crawford, Jeremy Chase; Rizzetto, Simone; Eltahla, Auda A.; Clemens, E. Bridie; Sant, Sneha; Chua, Brendon Y.; Wong, Chinn Yi; Allen, E. Kaitlynn; Teng, Don; Dash, Pradyot; Boyd, David F.; Grzelak, Ludivine; Zeng, Weiguang; Hurt, Aeron C.; Barr, Ian; Rockman, Steve; Jackson, David C.; Kotsimbos, Tom C.; Cheng, Allen C.; Richards, Michael; Westall, Glen P.; Loudovaris, Thomas; Mannering, Stuart I.; Elliott, Michael; Tangye, Stuart G.; Wakim, Linda M.; Rossjohn, Jamie; Vijaykrishna, Dhanasekaran; Luciani, Fabio; Thomas, Paul G.; Gras, Stephanie; Purcell, Anthony W.; Kedzierska, Katherine Share Save
Broad CD8+ T cell cross-recognition of distinct influenza A strains in humans Grant, Emma J.; Josephs, Tracy M.; Loh, Liyen; Clemens, E. Bridie; Sant, Sneha; Bharadwaj, Mandvi; Chen, Weisan; Rossjohn, Jamie; Gras, Stephanie; Kedzierska, Katherine Share Save
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Clonally diverse CD38+HLA-DR+CD8+ T cells persist during fatal H7N9 disease Wang, Zhongfang; Zhu, Lingyan; Nguyen, Thi H. O.; Wan, Yanmin; Sant, Sneha; Quinones-Parra, Sergio M.; Crawford, Jeremy Chase; Eltahla, Auda A.; Rizzetto, Simone; Bull, Rowena A.; Qiu, Chenli; Koutsakos, Marios; Clemens, E. Bridie; Loh, Liyen; Chen, Tianyue; Liu, Lu; Cao, Pengxing; Ren, Yanqin; Kedzierski, Lukasz; Kotsimbos, Tom; McCaw, James M.; La Gruta, Nicole L.; Turner, Stephen J.; Cheng, Allen C.; Luciani, Fabio; Zhang, Xiaoyan; Doherty, Peter C.; Thomas, Paul G.; Xu, Jianqing; Kedzierska, Katherine Share Save
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