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Epigenomic Blood-Based Early Detection of Pancreatic Cancer Employing Cell-Free DNA Haan, David; Bergamaschi, Anna; Friedl, Verena; Guler, Gulfem D.; Ning, Yuhong; Reggiardo, Roman; Kesling, Michael; Collins, Micah; Gibb, Bill; Hazen, Kyle; Bates, Steve; Antoine, Michael; Fraire, Carolina; Lopez, Vanessa; Malta, Roger; Nabiyouni, Maryam; Nguyen, Albert; Phillips, Tierney; Riviere, Michael; Leighton, Anna; Ellison, Christopher; McCarthy, Erin; Scott, Aaron; Gigliotti, Lauren; Nilson, Eric; Sheard, Judith; Peters, Melissa; Bethel, Kelly; Chowdhury, Shimul; Volkmuth, Wayne; Levy, Samuel Share Save
The 5-Hydroxymethylcytosine Landscape of Prostate Cancer Sjostrom, Martin; Zhao, Shuang G.; Levy, Samuel; Zhang, Meng; Ning, Yuhong; Shrestha, Raunak; Lundberg, Arian; Herberts, Cameron; Foye, Adam; Aggarwal, Rahul; Hua, Junjie T.; Li, Haolong; Bergamaschi, Anna; Maurice-Dror, Corinne; Maheshwari, Ashutosh; Chen, Sujun; Ng, Sarah W. S.; Ye, Wenbin; Petricca, Jessica; Fraser, Michael; Chesner, Lisa; Perry, Marc D.; Moreno-Rodriguez, Thaidy; Chen, William S.; Alumkal, Joshi J.; Chou, Jonathan; Morgans, Alicia K.; Beer, Tomasz M.; Thomas, George, V; Gleave, Martin; Lloyd, Paul; Phillips, Tierney; McCarthy, Erin; Haffner, Michael C.; Zoubeidi, Amina; Annala, Matti; Reiter, Robert E.; Rettig, Matthew B.; Witte, Owen N.; Fong, Lawrence; Bose, Rohit; Huang, Franklin W.; Luo, Jianhua; Bjartell, Anders; Lang, Joshua M.; Mahajan, Nupam P.; Lara, Primo N.; Evans, Christopher P.; Tran, Phuoc T.; Posadas, Edwin M.; He, Chuan; Cui, Xiao-Long; Huang, Jiaoti; Zwart, Wilbert; Gilbert, Luke A.; Maher, Christopher A.; Boutros, Paul C.; Chi, Kim N.; Ashworth, Alan; Small, Eric J.; He, Housheng H.; Wyatt, Alexander W.; Quigley, David A.; Feng, Felix Y. Share Save
Genome-wide Sequencing of Cell-free DNA Enables Detection of Copy-number Alterations in Patients with Cancer Where Tissue Biopsy is Not Feasible Jensen, Taylor J.; Goodman, Aaron M.; Ellison, Christopher K.; Holden, Kimberly A.; Kato, Shumei; Kim, Lisa; Daniels, Gregory A.; Fitzgerald, Kerry; McCarthy, Erin; Nakashe, Prachi; Mazloom, Amin R.; Almasri, Eyad; McLennan, Graham; Grosu, Daniel S.; Eisenberg, Marcia; Kurzrock, Razelle Share Save
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Detection of early stage pancreatic cancer using 5-hydroxymethylcytosine signatures in circulating cell free DNA Guler, Gulfem D.; Ning, Yuhong; Ku, Chin-Jen; Phillips, Tierney; McCarthy, Erin; Ellison, Christopher K.; Bergamaschi, Anna; Collin, Francois; Lloyd, Paul; Scott, Aaron; Antoine, Michael; Wang, Wendy; Chau, Kim; Ashworth, Alan; Quake, Stephen R.; Levy, Samuel Share Save
Epigenomic detection of multiple cancers in plasma derived cell free DNA Anna Bergamaschi, Anna; Ku, Jeremy; Ning, Yuhong; Collin, Francois; Ellison, Chris; Phillips, Tierney; McCarthy, Erin; Wang, Wendy; Antoine, Michael; Haan, David; Scott, Aaron; Lloyd, Paul; Guler, Gulfem; Ashworth, Alan; Quake, Stephen; Levy, Samuel Share Save
Detection of early stage pancreatic cancer using 5-hydroxymethylcytosine signatures in circulating cell free DNA Collin, Francois; Ning, Yuhong; Guler, Gulfem D.; Phillips, Tierney; McCarthy, Erin; Scott, Aaron; Ellison, Chris; Ku, Chin-Jen; Chau, Kim; Ashworth, Alan; Quake, Stephen R.; Levy, Samuel Share Save
Genome-Wide Sequencing of Cell-Free DNA Identifies Copy-Number Alterations That Can Be Used for Monitoring Response to Immunotherapy in Cancer Patients Jensen, Taylor J.; Goodman, Aaron M.; Kato, Shumei; Ellison, Christopher K.; Daniels, Gregory A.; Kim, Lisa; Nakashe, Prachi; McCarthy, Erin; Mazloom, Amin R.; McLennan, Graham; Grosu, Daniel S.; Ehrich, Mathias; Kurzrock, Razelle Share Save
Application of a novel analytical metric that quantifies copy number alterations in low-coverage, genome-wide sequencing of cell-free DNA to monitor and differentiate response to immunotherapy in cancer patients Jensen, Taylor J.; Goodman, Aaron M.; Ellison, Christopher K.; Kato, Shumei; Daniels, Gregory A.; Tran, Lisa; Nakashe, Prachi; McCarthy, Erin; Mazloom, Amin R.; McLennan, Graham; Grosu, Daniel S.; Ehrich, Mathias; Kurzrock, Razelle Share Save
Analyses of 16S rRNA and cpn60 gene sequences provide complementary information about potentially useful and harmful oil field microbiota Kryachko, Yuriy; Semler, Diana; Vogrinetz, John; Lemke, Markus; Irvine, Randy; Davidson, John; Links, Matthew G.; McCarthy, E. Luke; Haug, Brenda; Hemmingsen, Sean M. Share Save
Low coverage genome-wide sequencing of cell-free DNA enables detection, therapeutic monitoring, and characterization of copy number alterations in patients with solid tumors Ellison, Christopher K.; Goodman, Aaron M.; Riethdorf, Sabine; Mazloom, Amin R.; Tran, Lisa; Nakashe, Prachi; McCarthy, Erin; Gorges, Tobias; Stein, Alexander; Quidde, Julia; Grosu, Daniel S.; Ehrich, Mathias; Jensen, Taylor J.; Pantel, Klaus; Kurzrock, Razelle Share Save
Using Targeted Sequencing of Paralogous Sequences for Noninvasive Detection of Selected Fetal Aneuploidies Ellison, Christopher K.; Sun, Youting; Hogg, Grant; Fox, Jesse; Tao, Helen; McCarthy, Erin; Sagoe, Bright; Azab, Mostafa A.; Mazloom, Amin R.; Tynan, John; Burcham, Timothy; Kim, Sung K.; van den Boom, Dirk; Ehrich, Mathias; Jensen, Taylor J. Share Save
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Noninvasive Detection of Fetal Trisomy 21 by Sequencing of DNA in Maternal Blood: A Study in a Clinical Setting EDITORIAL COMMENT Ehrich, Mathias; Deciu, Cosmin; Zwiefelhofer, Tricia; Tynan, John A.; Cagasan, Lesley; Tim, Roger; Lu, Vivian; McCullough, Ron; McCarthy, Erin; Nygren, Anders O. H.; Dean, Jarrod; Tang, Lin; Hutchison, Don; Lu, Tim; Wang, Huiquan; Angkachatchai, Vach; Oeth, Paul; Cantor, Charles R.; Bombard, Allan; van den Boom, Dirk Share Save
Noninvasive detection of fetal trisomy 21 by sequencing of DNA in maternal blood: a study in a clinical setting Ehrich, Mathias; Deciu, Cosmin; Zwiefelhofer, Tricia; Tynan, John A.; Cagasan, Lesley; Tim, Roger; Lu, Vivian; McCullough, Ron; McCarthy, Erin; Nygren, Anders O. H.; Dean, Jarrod; Tang, Lin; Hutchison, Don; Lu, Tim; Wang, Huiquan; Angkachatchai, Vach; Oeth, Paul; Cantor, Charles R.; Bombard, Allan; van den Boom, Dirk Share Save
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