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Satellite repeat RNA expression in epithelial ovarian cancer associates with a tumor-immunosuppressive phenotype Porter, Rebecca L.; Sun, Siyu; Flores, Micayla N.; Berzolla, Emily; You, Eunae; Phillips, Ildiko E.; Neelima, K. C.; Desai, Niyati; Tai, Eric C.; Szabolcs, Annamaria; Lang, Evan R.; Pankaj, Amaya; Raabe, Michael J.; Thapar, Vishal; Xu, Katherine H.; Nieman, Linda T.; Rabe, Daniel C.; Kolin, David L.; Stover, Elizabeth H.; Pepin, David; Stott, Shannon L.; Deshpande, Vikram; Liu, Joyce F.; Solovyov, Alexander; Matulonis, Ursula A.; Greenbaum, Benjamin D.; Ting, David T. Share Save
Reverse Transcriptase Inhibition Disrupts Repeat Element Life Cycle in Colorectal Cancer Rajurkar, Mihir; Parikh, Aparna R.; Solovyov, Alexander; You, Eunae; Kulkarni, Anupriya S.; Chu, Chong; Xu, Katherine H.; Jaicks, Christopher; Taylor, Martin S.; Wu, Connie; Alexander, Katherine A.; Good, Charly R.; Szabolcs, Annamaria; Gerstberger, Stefanie; V. Tran, Antuan; Xu, Nova; Ebright, Richard Y.; Van Seventer, Emily E.; Vo, Kevin; Tai, Eric C.; Lu, Chenyue; Joseph-Chazan, Jasmin; Raabe, Michael J.; Nieman, Linda T.; Desai, Niyati; Arora, Kshitij S.; Ligorio, Matteo; Thapar, Vishal; Cohen, Limor; Garden, Padric M.; Senussi, Yasmeen; Zheng, Hui; Allen, Jill N.; Blaszkowsky, Lawrence S.; Clark, Jeffrey W.; Goyal, Lipika; Wo, Jennifer Y.; Ryan, David P.; Corcoran, Ryan B.; Deshpande, Vikram; Rivera, Miguel N.; Aryee, Martin J.; Hong, Theodore S.; Berger, Shelley L.; Walt, David R.; Burns, Kathleen H.; Park, Peter J.; Greenbaum, Benjamin D.; Ting, David T. Share Save
Temporal and spatial heterogeneity of host response to SARS-CoV-2 pulmonary infection Desai, Niyati; Neyaz, Azfar; Szabolcs, Annamaria; Shih, Angela R.; Chen, Jonathan H.; Thapar, Vishal; Nieman, Linda T.; Solovyov, Alexander; Mehta, Arnav; Lieb, David J.; Kulkarni, Anupriya S.; Jaicks, Christopher; Xu, Katherine H.; Raabe, Michael J.; Pinto, Christopher J.; Juric, Dejan; Chebib, Ivan; Colvin, Robert B.; Kim, Arthur Y.; Monroe, Robert; Warren, Sarah E.; Danaher, Patrick; Reeves, Jason W.; Gong, Jingjing; Rueckert, Erroll H.; Greenbaum, Benjamin D.; Hacohen, Nir; Lagana, Stephen M.; Rivera, Miguel N.; Sholl, Lynette M.; Stone, James R.; Ting, David T.; Deshpande, Vikram Share Save
Epithelial to mesenchymal plasticity and differential response to therapies in pancreatic ductal adenocarcinoma Porter, Rebecca L.; Magnus, Neelima K. C.; Thapar, Vishal; Morris, Robert; Szabolcs, Annamaria; Neyaz, Azfar; Kulkarni, Anupriya S.; Tai, Eric; Chougule, Abhijit; Hillis, Alessandra; Golczer, Gabriel; Guo, Hongshan; Yamada, Teppei; Kurokawa, Tomohiro; Yashaswini, Chittampalli; Ligorio, Matteo; Vo, Kevin D.; Nieman, Linda; Liss, Andrew S.; Deshpande, Vikram; Lawrence, Michael S.; Maheswaran, Shyamala; Fernandez-Del Castillo, Carlos; Hong, Theodore S.; Ryan, David P.; O'Dwyer, Peter J.; Drebin, Jeffrey A.; Ferrone, Cristina R.; Haber, Daniel A.; Ting, David T. Share Save
Engineered nanointerfaces for microfluidic isolation and molecular profiling of tumor-specific extracellular vesicles Reategui, Eduardo; van der Vos, Kristan E.; Lai, Charles P.; Zeinali, Mahnaz; Atai, Nadia A.; Aldikacti, Berent; Floyd, Frederick P., Jr.; Khankhel, Aimal H.; Thapar, Vishal; Hochberg, Fred H.; Sequist, Lecia V.; Nahed, Brian V.; Carter, Bob S.; Toner, Mehmet; Balaj, Leonora; Ting, David T.; Breakefield, Xandra O.; Stott, Shannon L. Share Save
Whole blood stabilization for the microfluidic isolation and molecular characterization of circulating tumor cells Wong, Keith H. K.; Tessier, Shannon N.; Miyamoto, David T.; Miller, Kathleen L.; Bookstaver, Lauren D.; Carey, Thomas R.; Stannard, Cleo J.; Thapar, Vishal; Tai, Eric C.; Vo, Kevin D.; Emmons, Erin S.; Pleskow, Haley M.; Sandlin, Rebecca D.; Sequist, Lecia V.; Ting, David T.; Haber, Daniel A.; Maheswaran, Shyamala; Stott, Shannon L.; Toner, Mehmet Share Save
Prediction of potent shRNAs with a sequential classification algorithm Pelossof, Raphael; Fairchild, Lauren; Huang, Chun-Hao; Widmer, Christian; Sreedharan, Vipin T.; Sinha, Nishi; Lai, Dan-Yu; Guan, Yuanzhe; Premsrirut, Prem K.; Tschaharganeh, Darjus F.; Hoffmann, Thomas; Thapar, Vishal; Xiang, Qing; Garippa, Ralph J.; Ratsch, Gunnar; Zuber, Johannes; Lowe, Scott W.; Leslie, Christina S.; Fellmann, Christof Share Save
Enhanced Isolation and Release of Circulating Tumor Cells Using Nanoparticle Binding and Ligand Exchange in a Microfluidic Chip Park, Myoung-Hwan; Reategui, Eduardo; Li, Wei; Tessier, Shannon N.; Wong, Keith H. K.; Jensen, Anne E.; Thapar, Vishal; Ting, David; Toner, Mehmet; Stott, Shannon L.; Hammond, Paula T. Share Save
A tunable delivery platform to provide local chemotherapy for pancreatic ductal adenocarcinoma Indolfi, Laura; Ligorio, Matteo; Ting, David T.; Xega, Kristina; Tzafriri, Abraham R.; Bersani, Francesca; Aceto, Nicola; Thapar, Vishal; Fuchs, Bryan C.; Deshpande, Vikram; Baker, Aaron B.; Ferrone, Cristina R.; Haber, Daniel A.; Langer, Robert; Clark, Jeffrey W.; Edelman, Elazer R. Share Save
BRD4 Connects Enhancer Remodeling to Senescence Immune Surveillance Tasdemir, Nilgun; Banito, Ana; Roe, Jae-Seok; Alonso-Curbelo, Direna; Camiolo, Matthew; Tschaharganeh, Darjus F.; Huang, Chun-Hao; Aksoy, Ozlem; Bolden, Jessica E.; Chen, Chi-Chao; Fennell, Myles; Thapar, Vishal; Chicas, Agustin; Vakoc, Christopher R.; Lowe, Scott W. Share Save
Molecular subtyping of pancreatic adenocarcinoma identifies SV2 positive subpopulation in classical PDAC Dias-Santos, Daniela; Ligorio, Matteo; Arora, Kshitij; Thapar, Vishal; MacKenzie, Olivia C.; Sil, Srinjoy; Desai, Niyati; Deshpande, Vikram; Rivera, Miguel N.; Ferrone, Cristina R.; Ting, David T. Share Save
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GUIDE-seq enables genome-wide profiling of off-target cleavage by CRISPR-Cas nucleases Tsai, Shengdar Q.; Zheng, Zongli; Nguyen, Nhu T.; Liebers, Matthew; Topkar, Ved V.; Thapar, Vishal; Wyvekens, Nicolas; Khayter, Cyd; Iafrate, A. John; Le, Long P.; Aryee, Martin J.; Joung, J. Keith Share Save
Development of siRNA Payloads to Target KRAS-Mutant Cancer Yuan, Tina L.; Fellmann, Christof; Lee, Chih-Shia; Ritchie, Cayde D.; Thapar, Vishal; Lee, Liam G.; Hsu, Dennis J.; Grace, Danielle; Carver, Joseph O.; Zuber, Johannes; Luo, Ji; McCormick, Frank; Lowe, Scott W. Share Save
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