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Tumor antigens preferentially derive from unmutated genomic sequences in melanoma and non-small cell lung cancer Apavaloaei, Anca; Zhao, Qingchuan; Hesnard, Leslie; Cahuzac, Maxime; Durette, Chantal; Larouche, Jean-David; Hardy, Marie-Pierre; Vincent, Krystel; Brochu, Sylvie; Laverdure, Jean-Philippe; Lanoix, Joel; Courcelles, Mathieu; Gendron, Patrick; Lajoie, Mathieu; Cuevas, Maria Virginia Ruiz; Kina, Eralda; Perrault, Julie; Humeau, Juliette; Ehx, Gregory; Lemieux, Sebastien; Watson, Ian R.; Speiser, Daniel E.; Bassani-Sternberg, Michal; Thibault, Pierre; Perreault, Claude Share Save
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Immunopeptidomics-based identification of naturally presented non-canonical circRNA-derived peptides Ferreira, Humberto J.; Stevenson, Brian J.; Pak, Huisong; Yu, Fengchao; Almeida Oliveira, Jessica; Huber, Florian; Taillandier-Coindard, Marie; Michaux, Justine; Ricart-Altimiras, Emma; Kraemer, Anne I.; Kandalaft, Lana E.; Speiser, Daniel E.; Nesvizhskii, Alexey I.; Mueller, Markus; Bassani-Sternberg, Michal Share Save
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Regulatory circuits of mitophagy restrict distinct modes of cell death during memory CD8+ T cell formation Franco, Fabien; Bevilacqua, Alessio; Wu, Ruey-Mei; Kao, Kung-Chi; Lin, Chun-Pu; Rousseau, Lorene; Peng, Fu-Ti; Chuang, Yu-Ming; Peng, Jhan-Jie; Park, Jaeoh; Xu, Yingxi; Cassotta, Antonino; Yu, Yi-Ru; Speiser, Daniel E.; Sallusto, Federica; Ho, Ping-Chih Share Save
A phase 1 trial of adoptive transfer of vaccine-primed autologous circulating T cells in ovarian cancer Bobisse, Sara; Bianchi, Valentina; Tanyi, Janos; Sarivalasis, Apostolos; Missiaglia, Edoardo; Petremand, Remy; Benedetti, Fabrizio; Torigian, Drew; Genolet, Raphael; Barras, David; Michel, Alexandra; Mastroyannis, Spyridon; Zsiros, Emese; Dangaj Laniti, Denarda; Tsourti, Zoi; Stevenson, Brian; Iseli, Christian; Levine, Bruce; Speiser, Daniel; Gfeller, David; Bassani-Sternberg, Michal; Powell, Daniel; June, Carl; Dafni, Urania; Kandalaft, Lana; Harari, Alexandre; Coukos, George Share Save
Combinatorial Treatment with PARP and MAPK Inhibitors Overcomes Phenotype Switch-Driven Drug Resistance in Advanced Melanoma Ferretti, Lorenza P.; Bohi, Flurina; Pedrioli, Deena M. Leslie; Cheng, Phil F.; Ferrari, Elena; Baumgaertner, Petra; Alvarado-Diaz, Abdiel; Sella, Federica; Cereghetti, Alessandra; Turko, Patrick; Wright, Roni H.; De Bock, Katrien; Speiser, Daniel E.; Ferrari, Roberto; Levesque, Mitchell P.; Hottiger, Michael O. Share Save
Activation of the transcription factor NFAT5 in the tumor microenvironment enforces CD8+ T cell exhaustion Tille, Laure; Cropp, Daniela; Charmoy, Melanie; Reichenbach, Patrick; Andreatta, Massimo; Wyss, Tania; Bodley, Gabrielle; Crespo, Isaac; Nassiri, Sina; Lourenco, Joao; Leblond, Marine M.; Lopez-Rodriguez, Cristina; Speiser, Daniel E.; Coukos, George; Irving, Melita; Carmona, Santiago J.; Held, Werner; Verdeil, Gregory Share Save
Clonal expansion of intra-epithelial T cells in breast cancer revealed by spatial transcriptomics Romanens, Lou; Chaskar, Prasad; Marcone, Rachel; Ryser, Stephan; Tille, Jean-Christophe; Genolet, Raphael; Heimgartner-Hu, Ketty; Heimgartner, Killian; Moore, Jonathan S.; Liaudet, Nicolas; Kaya, Guerkan; Pittet, Mikael J.; Dietrich, Pierre-Yves; Delorenzi, Mauro; Speiser, Daniel E.; Harari, Alexandre; Tsantoulis, Petros; Labidi-Galy, Sana Intidhar Share Save
Neoantigen-specific CD8 T cells with high structural avidity preferentially reside in and eliminate tumors Schmidt, Julien; Chiffelle, Johanna; Perez, Marta A. S.; Magnin, Morgane; Bobisse, Sara; Arnaud, Marion; Genolet, Raphael; Cesbron, Julien; Barras, David; Navarro Rodrigo, Blanca; Benedetti, Fabrizio; Michel, Alexandra; Queiroz, Lise; Baumgaertner, Petra; Guillaume, Philippe; Hebeisen, Michael; Michielin, Olivier; Nguyen-Ngoc, Tu; Huber, Florian; Irving, Melita; Tissot-Renaud, Stephanie; Stevenson, Brian J.; Rusakiewicz, Sylvie; Dangaj Laniti, Denarda; Bassani-Sternberg, Michal; Rufer, Nathalie; Gfeller, David; Kandalaft, Lana E.; Speiser, Daniel E.; Zoete, Vincent; Coukos, George; Harari, Alexandre Share Save
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TCR sequencing and cloning methods for repertoire analysis and isolation of tumor-reactive TCRs Genolet, Raphael; Bobisse, Sara; Chiffelle, Johanna; Arnaud, Marion; Petremand, Remy; Queiroz, Lise; Michel, Alexandra; Reichenbach, Patrick; Cesbron, Julien; Auger, Aymeric; Baumgaertner, Petra; Guillaume, Philippe; Schmidt, Julien; Irving, Melita; Kandalaft, Lana E.; Speiser, Daniel E.; Coukos, George; Harari, Alexandre Share Save
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