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L

Louis B. Kuemmerle

helmholtz munich

8H-index
16Paper Count
1.4KCitation Count
Published Papers 4
Publication Date
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Identifying 3D signal overlaps in spatial transcriptomics data with ovrlpy
errNature Biotechnology
IF41.7
err2026-02-10
err0
PREAI
errSebastian Tiesmeyer; Niklas Müller-Bötticher; Alexander Malt; Leyao Ma; Sergio Marco-Salas; Paul Kiessling; Paul Horn; Adrien Guillot; Louis B. Kuemmerle; Frank Tacke; Fabian J. Theis; Christoph Kuppe; Mats Nilsson; Roland Eils; Brian Long; Naveed Ishaque
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Spatial single-cell atlas reveals regional variations in healthy and diseased human lung
errNature Communications
IF15.7
err2025-11-05
err0
errOAAI
errAlexandra B. Firsova; Sergio Marco Salas; Louis B. Kuemmerle; Xesús M. Abalo; Alexandros Sountoulidis; Ludvig Larsson; Krishnaa T. Mahbubani; Jonas Theelke; Zaneta Andrusivova; Leire Alonso Galicia; Andreas Liontos; Tamás Balassa; Ferenc Kovacs; Peter Horvath; Yuexin Chen; Janine Gote-Schniering; Mircea-Gabriel Stoleriu; Jürgen Behr; Kerstin B. Meyer; Wim Timens; Herbert B. Schiller; Malte D. Luecken; Fabian J. Theis; Joakim Lundeberg; Mats Nilsson; Martijn C. Nawijn; Christos Samakovlis
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errSave
Probe set selection for targeted spatial transcriptomics
errNATURE METHODS
IF32.1
err2024-11-18
err1
errOAAI
errKuemmerle, Louis B.; Luecken, Malte D.; Firsova, Alexandra B.; Andrade e Sousa, Lisa Barros de; Strasser, Lena; Mekki, Ilhem Isra; Campi, Francesco; Heumos, Lukas; Shulman, Maiia; Beliaeva, Valentina; Hediyeh-Zadeh, Soroor; Schaar, Anna C.; Mahbubani, Krishnaa T.; Sountoulidis, Alexandros; Balassa, Tamas; Kovacs, Ferenc; Horvath, Peter; Piraud, Marie; Erturk, Ali; Samakovlis, Christos; Theis, Fabian J.
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Squidpy: a scalable framework for spatial omics analysis
errNATURE METHODS
IF32.1
err2022-01-31
err293
errOAAI
errPalla, Giovanni; Spitzer, Hannah; Klein, Michal; Fischer, David; Schaar, Anna Christina; Kuemmerle, Louis Benedikt; Rybakov, Sergei; Ibarra, Ignacio L.; Holmberg, Olle; Virshup, Isaac; Lotfollahi, Mohammad; Richter, Sabrina; Theis, Fabian J.
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Research Directions

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Co-authors
Cooperation Journals
R
Roland Eils
H-index: 138 · Papers: 1.1K
F
Fabian J. Theis
H-index: 125 · Papers: 1.1K
F
Frank Tacke
H-index: 124 · Papers: 1.4K
J
Joakim Lundeberg
H-index: 90 · Papers: 523
W
Wim Timens
H-index: 87 · Papers: 947
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