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Point-of-Care Solid-Phase PCR in a Vertical Microfluidic Chip Integrated with All-Dielectric Nanostructured Metasurface for Highly Sensitive, Multiplexed Pathogen Detection Seder, Islam; Beliaev, Leonid; Tellez, Rodrigo Coronel; Anthon, Christian; Grissa, Dhouha; Zheng, Tao; Gorodkin, Jan; Xiao, Sanshui; Sun, Yi Share Save
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An Overview and Comparative Analysis of CRISPR-SpCas9 gRNA Activity Prediction Tools Yuan, Hao; Song, Chunping; Xu, Huixin; Sun, Ying; Anthon, Christian; Bolund, Lars; Lin, Lin; Benabdellah, Karim; Lee, Ciaran; Hou, Yong; Gorodkin, Jan; Luo, Yonglun Share Save
CRISPRi screen for enhancing heterologous a-amylase yield in Bacillus subtilis (vol 50, kuac028, 2023) Geissler, Adrian Sven; Fehler, Annaleigh Ohrt; Poulsen, Line Dahl; Gonzalez-Tortuero, Enrique; Kallehauge, Homas Beuchert; Alkan, Ferhat; Anthon, Christian; Seemann, Stefan Ernst; Rasmussen, Michael Dolberg; Breuner, Anne; Hjort, Carsten; Vinther, Jeppe; Gorodkin, Jan Share Save
The transcriptomic landscape of neurons carrying PSEN1 mutations reveals changes in extracellular matrix components and non-coding gene expression Corsi, Giulia I.; Gadekar, Veerendra P.; Haukedal, Henriette; Doncheva, Nadezhda T.; Anthon, Christian; Ambardar, Sheetal; Palakodeti, Dasaradhi; Hyttel, Poul; Freude, Kristine; Seemann, Stefan E.; Gorodkin, Jan Share Save
Cross-species high-resolution transcriptome profiling suggests biomarkers and therapeutic targets for ulcerative colitis Yarani, Reza; Palasca, Oana; Doncheva, Nadezhda T.; Anthon, Christian; Pilecki, Bartosz; Svane, Cecilie A. S.; Mirza, Aashiq H.; Litman, Thomas; Holmskov, Uffe; Bang-Berthelsen, Claus H.; Vilien, Mogens; Jensen, Lars J.; Gorodkin, Jan; Pociot, Flemming Share Save
CRISPRi screen for enhancing heterologous α-amylase yield in Bacillus subtilis Geissler, Adrian Sven; Fehler, Annaleigh Ohrt; Poulsen, Line Dahl; Gonzalez-Tortuero, Enrique; Kallehauge, Thomas Beuchert; Alkan, Ferhat; Anthon, Christian; Seemann, Stefan Ernst; Rasmussen, Michael Dolberg; Breuener, Anne; Hjort, Carsten; Vinther, Jeppe; Gorodkin, Jan Share Save
The impact of PrsA over-expression on the Bacillus subtilis transcriptome during fed-batch fermentation of alpha-amylase production Geissler, Adrian S.; Poulsen, Line D.; Doncheva, Nadezhda T.; Anthon, Christian; Seemann, Stefan E.; Gonzalez-Tortuero, Enrique; Breuener, Anne; Jensen, Lars J.; Hjort, Carsten; Vinther, Jeppe; Gorodkin, Jan Share Save
Massively targeted evaluation of therapeutic CRISPR off-targets in cells Pan, Xiaoguang; Qu, Kunli; Yuan, Hao; Xiang, Xi; Anthon, Christian; Pashkova, Liubov; Liang, Xue; Han, Peng; Corsi, Giulia, I; Xu, Fengping; Liu, Ping; Zhong, Jiayan; Zhou, Yan; Ma, Tao; Jiang, Hui; Liu, Junnian; Wang, Jian; Jessen, Niels; Bolund, Lars; Yang, Huanming; Xu, Xun; Church, George M.; Gorodkin, Jan; Lin, Lin; Luo, Yonglun Share Save
Enhancing CRISPR-Cas9 gRNA efficiency prediction by data integration and deep learning Xiang, Xi; Corsi, Giulia, I; Anthon, Christian; Qu, Kunli; Pan, Xiaoguang; Liang, Xue; Han, Peng; Dong, Zhanying; Liu, Lijun; Zhong, Jiayan; Ma, Tao; Wang, Jinbao; Zhang, Xiuqing; Jiang, Hui; Xu, Fengping; Liu, Xin; Xu, Xun; Wang, Jian; Yang, Huanming; Bolund, Lars; Church, George M.; Lin, Lin; Gorodkin, Jan; Luo, Yonglun Share Save
BSGatlas: a unified Bacillus subtilis genome and transcriptome annotation atlas with enhanced information access Geissler, Adrian Sven; Anthon, Christian; Alkan, Ferhat; Gonzalez-Tortuero, Enrique; Poulsen, Line Dahl; Kallehauge, Thomas Beuchert; Breuner, Anne; Seemann, Stefan Ernst; Vinther, Jeppe; Gorodkin, Jan Share Save
Human pathways in animal models: possibilities and limitations Doncheva, Nadezhda T.; Palasca, Oana; Yarani, Reza; Litman, Thomas; Anthon, Christian; Groenen, Martien A. M.; Stadler, Peter F.; Pociot, Flemming; Jensen, Lars J.; Gorodkin, Jan Share Save
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Transcriptome landscape of protein-coding genes and long noncoding RNAs in the colon and blood of DSS-induced mouse model of Acute ulcerative colitis Yarani, R.; Palasca, O.; Doncheva, N. Tsankova; Anthon, C.; Pilecki, B.; Litman, T.; Holmskov, U.; Jensen, L. J.; Gorodkin, J.; Pociot, F. Share Save
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RAIN: RNA-protein Association and Interaction Networks Junge, Alexander; Refsgaard, Jan C.; Garde, Christian; Pan, Xiaoyong; Santos, Alberto; Alkan, Ferhat; Anthon, Christian; von Mering, Christian; Workman, Christopher T.; Jensen, Lars Juhl; Gorodkin, Jan Share Save
Tools and data services registry: a community effort to document bioinformatics resources Ison, Jon; Rapacki, Kristoffer; Menager, Herve; Kalas, Matus; Rydza, Emil; Chmura, Piotr; Anthon, Christian; Beard, Niall; Berka, Karel; Bolser, Dan; Booth, Tim; Bretaudeau, Anthony; Brezovsky, Jan; Casadio, Rita; Cesareni, Gianni; Coppens, Frederik; Cornell, Michael; Cuccuru, Gianmauro; Davidsen, Kristian; Della Vedova, Gianluca; Dogan, Tunca; Doppelt-Azeroual, Olivia; Emery, Laura; Gasteiger, Elisabeth; Gatter, Thomas; Goldberg, Tatyana; Grosjean, Marie; Gruening, Bjoern; Helmer-Citterich, Manuela; Ienasescu, Hans; Ioannidis, Vassilios; Jespersen, Martin Closter; Jimenez, Rafael; Juty, Nick; Juvan, Peter; Koch, Maximilian; Laibe, Camille; Li, Jing-Woei; Licata, Luana; Mareuil, Fabien; Micetic, Ivan; Friborg, Rune Mollegaard; Moretti, Sebastien; Morris, Chris; Moeller, Steffen; Nenadic, Aleksandra; Peterson, Hedi; Profiti, Giuseppe; Rice, Peter; Romano, Paolo; Roncaglia, Paola; Saidi, Rabie; Schafferhans, Andrea; Schwammle, Veit; Smith, Callum; Sperotto, Maria Maddalena; Stockinger, Heinz; Varekova, Radka Svobodova; Tosatto, Silvio C. E.; de la Torre, Victor; Uva, Paolo; Via, Allegra; Yachdav, Guy; Zambelli, Federico; Vriend, Gert; Rost, Burkhard; Parkinson, Helen; Longreen, Peter; Brunak, Soren Share Save
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