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陈

陈盛泉 (Shengquan Chen)

nankai university

17H-index
85Paper Count
1.1KCitation Count
Published Papers 37
Publication Date
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Comparative Evaluation of Gene Selection Approaches in Transcriptomics: Bias Correction and Visualization with TransPro
errGigaScience
IF3.9
err2026-05-18
err0
errOAAI
errDongyue Yu; Chen Li; Shuo Yan; Lujiale Guo; Jingyu Liang; Shengquan Chen; Wenjun Bu
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Dissecting epigenetic heterogeneity in single-cell DNA methylomes with a unified framework
errNature Communications
IF15.7
err2026-05-15
err0
errOAAI
errSongming Tang; Siyu Li; Guangxin Zhang; Aoran Lyu; Han Li; Shengquan Chen
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errSave
CSFeatures improves the identification of cell-type-specific differential features in single-cell and spatial omics data
errJournal of Advanced Research
IF13
err2026-05-13
err0
errOAAI
errRufeng Li; Yongkang Li; Heyang Hua; Zhen Li; Hongyu Su; Yu Zhang; Yufei Yao; Yidong Wang; Shengquan Chen; Yungang Xu
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errSave
Cross-modality representation and multi-sample integration of spatially resolved omics data
errBriefings in Bioinformatics
IF7.7
err2026-05-01
err0
PREAI
errLi, Zhen; Cui, Xuejian; Chen, Xiaoyang; Gao, Zijing; Liu, Yuyao; Pan, Yan; Chen, Shengquan; Lv, Hairong; Zhai, Lei; Jiang, Rui
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errSave
A unified framework combining linear and 3D molecular features for robust drug-protein interaction prediction
errCell Reports Methods
IF4.5
err2026-02-12
err0
errOAAI
errChang Sun; Zichen Qin; Minglei Li; Yanfei Li; Rong Tang; Shengquan Chen; Yuxiang Wang; Yanqiang Liu; Jinmao Wei; Jian Liu
errShare
errSave
A generic reference defined by consensus peaks for single-cell ATAC-seq data analysis
errNature Communications
IF15.7
err2026-02-09
err0
errOAAI
errQiuchen Meng; Xinze Wu; Wenchang Chen; Yubo Zhao; Chen Li; Zheng Wei; Xiaocheng Zeng; Jiaqi Li; Xi Xi; Sijie Chen; Catherine Zhang; Shengquan Chen; Jiaqi Li; Xiaowo Wang; Rui Jiang; Lei Wei; Xuegong Zhang
errShare
errSave
DiTSim: A Diffusion-Transformers Based Single-Cell ATAC-seq Data Simulator
errInterdisciplinary Sciences: Computational Life Sciences
IF0
err2025-10-21
err0
PREAI
errShengze Dong; Songming Tang; Ding Liu; Shengquan Chen
errShare
errSave
MethAgingDB: a comprehensive DNA methylation database for aging biology
errScientific Data
IF6.9
err2025-07-14
err0
errOAAI
errSiyu Li; Songming Tang; Haocheng Ma; Haixin Wang; Shengquan Chen
errShare
errSave
CREATE: cell-type-specific cis-regulatory element identification via discrete embedding
errNATURE COMMUNICATIONS
IF15.7
err2025-05-17
err0
errOAAI
errCui, Xuejian; Yin, Qijin; Gao, Zijing; Li, Zhen; Chen, Xiaoyang; Lv, Hairong; Chen, Shengquan; Liu, Qiao; Zeng, Wanwen
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errSave
Facilitating single-cell chromatin accessibility research with a user-friendly database
errFRONTIERS OF COMPUTER SCIENCE
IF4.6
err2025-04-05
err0
PREAI
errHua, Heyang; Li, Sijie; Liang, Haitian; Chen, Shengquan
errShare
errSave
Unveiling potential threats: backdoor attacks in single-cell pre-trained models
errCELL DISCOVERY
IF12.5
err2024-11-30
err0
errOAAI
errFeng, Sicheng; Li, Siyu; Chen, Luonan; Chen, Shengquan
errShare
errSave
GATDE: A graph attention network with diffusion-enhanced protein-protein interaction for cancer classification
errMETHODS
IF4.3
err2024-11-01
err1
PREAI
errSong, Ruike; Wang, Xiaofeng; Zhang, Jiahao; Chen, Shengquan; Zhou, Jianyu
errShare
errSave
scCrab: A Reference-Guided Cancer Cell Identification Method based on Bayesian Neural Networks
errINTERDISCIPLINARY SCIENCES-COMPUTATIONAL LIFE SCIENCES
IF3.9
err2024-09-30
err0
PREAI
errHua, Heyang; Long, Wenxin; Pan, Yan; Li, Siyu; Zhou, Jianyu; Wang, Haixin; Chen, Shengquan
errShare
errSave
Precise detection of cell-type-specific domains in spatial transcriptomics
errCELL REPORTS METHODS
IF4.5
err2024-08-01
err1
errOAAI
errRuan, Zhihan; Zhou, Weijun; Liu, Hong; Wei, Jinmao; Pan, Yichen; Yan, Chaoyang; Wei, Xiaoyi; Xiang, Wenting; Yan, Chengwei; Chen, Shengquan; Liu, Jian
errShare
errSave
Influence of Thermal Desorption Technology on Removal Effects and Properties of PAH-Contaminated Soil Based on Engineering Experiments
errAGRONOMY-BASEL
IF3.4
err2024-05-24
err2
errOAAI
errZhang, Xin; Li, Lei; Shi, Xiaokai; Chen, Shengquan; Liang, Wen; Zhu, Yuen; Li, Hua
errShare
errSave
Discrete latent embedding of single-cell chromatin accessibility sequencing data for uncovering cell heterogeneity
errNATURE COMPUTATIONAL SCIENCE
IF18.3
err2024-05-10
err1
PREAI
errCui, Xuejian; Chen, Xiaoyang; Li, Zhen; Gao, Zijing; Chen, Shengquan; Jiang, Rui
errShare
errSave
Accurate Annotation for Differentiating and Imbalanced Cell Types in Single-Cell Chromatin Accessibility Data
errIEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS
IF3.4
err2024-05-01
err2
PREAI
errJia, Yuhang; Li, Siyu; Jiang, Rui; Chen, Shengquan
errShare
errSave
scButterfly: a versatile single-cell cross-modality translation method via dual-aligned variational autoencoders
errNATURE COMMUNICATIONS
IF15.7
err2024-04-06
err4
errOAAI
errCao, Yichuan; Zhao, Xiamiao; Tang, Songming; Jiang, Qun; Li, Sijie; Li, Siyu; Chen, Shengquan
errShare
errSave
Influences of Al particles and current density on structural, mechanical and anti-corrosion properties of electrodeposited Ni-Co/Al composite coatings
errCERAMICS INTERNATIONAL
IF5.6
err2024-04-01
err4
PREAI
errZhang, Zhen; Li, Baosong; Chen, Shengquan; Yuan, Ziwei; Xu, Chenyang; Zhang, Weiwei
errShare
errSave
scEpiTools: a database to comprehensively interrogate analytic tools for single-cell epigenomic data
errJOURNAL OF GENETICS AND GENOMICS
IF7.1
err2024-04-01
err10
errOAAI
errGao, Zijing; Chen, Xiaoyang; Li, Zhen; Cui, Xuejian; Jiang, Qun; Li, Keyi; Chen, Shengquan; Jiang, Rui
errShare
errSave

Research Directions

基于机器学习方法的单细胞组学数据建模与解析
Co-authors
Cooperation Journals
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