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Yoshitaka Shirasaki

The University of Tokyo

16H-index
127Paper Count
2.1KCitation Count
Published Papers 34
Publication Date
Temporal control of Ninj1 activation determines cell-to-cell heterogeneity in IL-33 release
err2026-05-21
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errOAAI
errTakumi Kanokogi; Sachiko Komazawa-Sakon; Shin Murai; Kenta Moriwaki; Yoshitaka Shirasaki; Mai Yamagishi; Kenta Sumiyama; Kazuma Kishi; Hiroyasu Nakano
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cGAS-IFN-I responses by extracting nuclear DNA from dying cells via nucleocytosis
err2026-02-18
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errOAAI
errHideo Negishi; Yusuke Wada; Yoshitaka Shirasaki; Tomoya Hayashi; Yuji Kubota; Tomio Iwasaki; Mina Kurosawa; Tatsuma Ban; Daisuke Muto; Yusuke Suenaga; Taichi Kojima; Yuzuki Matsuda; Sean Lord Irish; Kosuke Dodo; Toru Suzuki; Mai Yamagishi; Burcu Temizoz; Atsushi Yoshimori; Chisato Kanai; Yoji Nagasaki; Masaki Ohmuraya; Tomohiko Tamura; Atsushi Iwama; Toshifumi Inada; Etsushi Kuroda; Kouji Kobiyama; Noriko Toyama-Sorimachi; Mutsuhiro Takekawa; Cevayir Coban; Ken J. Ishii
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Resident alveolar macrophages are highly susceptible to the induction of RIPK1/RIPK3-mediated necroptosis which promote efficient pulmonary immune response
err2025-12-22
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errOAAI
errTakumi Adachi; Kazufumi Matsushita; Koubun Yasuda; Masakiyo Nakahira; Mai Imasaka; Michihiko Sugimoto; Zhuohao Yang; Kouji Kobiyama; Tomoya Hayashi; Ken J. Ishii; Yasuo Yoshioka; Masaki Ohmuraya; Yoshitaka Shirasaki; Etsushi Kuroda
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Single-cell analysis reveals cell death as driver of NLRP3-mediated secretion of IL-1β in human monocytes
err2025-11-11
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PREAI
errLieselotte Vande Walle; Kentaro Kato; Mai Yamagishi; Takashi Kamatani; Alex Vervaeke; Rosa Martín-Pérez; Masaki Shimizu; Takumi Takizawa; Junko Takita; Ryuta Nishikomori; Osamu Ohara; Kazushi Izawa; Yoshitaka Shirasaki; Mohamed Lamkanfi
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Senescence-associated lysosomal dysfunction impairs cystine deprivation-induced lipid peroxidation and ferroptosis
err2025-07-29
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errOAAI
errTze Mun Loo; Xiangyu Zhou; Yoko Tanaka; Sho Sugawara; Shota Yamauchi; Hiroko Kawasaki; Yuta Matsuoka; Yuki Sugiura; Shinya Sakuma; Yoko Yamanishi; Satoshi Yotsumoto; Kosuke Dodo; Yoshitaka Shirasaki; Takashi Kamatani; Akiko Takahashi
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Longitudinal Analysis of Somatic Mosaicism and Clonal Hematopoiesis in Cryopyrin-Associated Periodic Syndrome
err2025-07-22
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PREAI
errKentaro Kato MD; Yoshitaka Honda MD PhD; Takashi Kamatani MD PhD; Kosaku Murakami MD PhD; Masaki Shimizu MD PhD; Toshihiko Komai MD PhD; Hiroko Kanda MD PhD; Junko Yasumura MD PhD; Taiki Ando MD PhD; Yuichi Yamasaki MD PhD; Syuji Takei MD PhD; Hidenori Ohnishi MD PhD; Tomoyo Matsubara MD PhD; Takumi Takizawa MD PhD; Toshinao Kawai MD PhD; Hiroaki Umebayashi MD; Shigeo Nishimata MD PhD; Hisashi Kawashima MD PhD; Naoto Tamura MD PhD; Junichi Hosokawa MD PhD; Naotomo Kambe MD PhD; Hiroki Kitamoto MD; Makoto Okabe MD; Shuji Yamamoto MD PhD; Yoichi Kurosawa MD PhD; Utako Kaneko MD PhD; Yosuke Nakamura MD; Takayuki Miyamoto MD PhD; Hiroshi Nihira MD PhD; Hirofumi Shibata MD PhD; Takayuki Tanaka MD PhD; Eitaro Hiejima MD PhD; Keishi Fujio MD PhD; Ayako Nakajima MD PhD; Mai Yamagishi PhD; Yoshitaka Shirasaki PhD; Megumu K Saito MD PhD; Satoshi Okada MD PhD; Seishi Ogawa MD PhD; Junko Takita MD PhD; Osamu Ohara PhD; Ryuta Nishikomori MD PhD; Takahiro Yasumi MD PhD; Kazushi Izawa MD PhD
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Zinc plays an essential role in type 2 cytokine production from ILC2s in asthma
err2023-10-27
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PREAI
errKabata, Hiroki; Irie, Misato; Baba, Rie; Shirasaki, Yoshitaka; Kamatani, Takashi; Yamagishi, Mai; Fukunaga, Koichi
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Time-dependent cell-state selection identifies transiently expressed genes regulating ILC2 activation
err2023-09-06
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errOAAI
errTanaka, Yumiko; Yamagishi, Mai; Motomura, Yasutaka; Kamatani, Takashi; Oguchi, Yusuke; Suzuki, Nobutake; Kiniwa, Tsuyoshi; Kabata, Hiroki; Irie, Misato; Tsunoda, Tatsuhiko; Miya, Fuyuki; Goda, Keisuke; Ohara, Osamu; Funatsu, Takashi; Fukunaga, Koichi; Moro, Kazuyo; Uemura, Sotaro; Shirasaki, Yoshitaka
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Annexin A1 is a cell-intrinsic metalloregulator of zinc in human ILC2s
err2023-06-01
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errOAAI
errIrie, Misato; Kabata, Hiroki; Sasahara, Kotaro; Kurihara, Momoko; Shirasaki, Yoshitaka; Kamatani, Takashi; Baba, Rie; Matsusaka, Masako; Koga, Satoshi; Masaki, Katsunori; Miyata, Jun; Araki, Yasutomo; Kikawada, Toru; Kabe, Yasuaki; Suematsu, Makoto; Yamagishi, Mai; Uemura, Sotaro; Moro, Kazuyo; Fukunaga, Koichi
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Whole-embryonic identification of maternal microchimeric cell types in mouse using single-cell RNA sequencing
err2022-11-04
err9
errOAAI
errFujimoto, Kana; Nakajima, Akira; Hori, Shohei; Tanaka, Yumiko; Shirasaki, Yoshitaka; Uemura, Sotaro; Irie, Naoki
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Raman image-activated cell sorting
err2020-07-10
err148
errOAAI
errNitta, Nao; Iino, Takanori; Isozaki, Akihiro; Yamagishi, Mai; Kitahama, Yasutaka; Sakuma, Shinya; Suzuki, Yuta; Tezuka, Hiroshi; Oikawa, Minoru; Arai, Fumihito; Asai, Takuya; Deng, Dinghuan; Fukuzawa, Hideya; Hase, Misa; Hasunuma, Tomohisa; Hayakawa, Takeshi; Hiraki, Kei; Hiramatsu, Kotaro; Hoshino, Yu; Inaba, Mary; Inoue, Yuki; Ito, Takuro; Kajikawa, Masataka; Karakawa, Hiroshi; Kasai, Yusuke; Kato, Yuichi; Kobayashi, Hirofumi; Lei, Cheng; Matsusaka, Satoshi; Mikami, Hideharu; Nakagawa, Atsuhiro; Numata, Keiji; Ota, Tadataka; Sekiya, Takeichiro; Shiba, Kiyotaka; Shirasaki, Yoshitaka; Suzuki, Nobutake; Tanaka, Shunji; Ueno, Shunnosuke; Watarai, Hiroshi; Yamano, Takashi; Yazawa, Masayuki; Yonamine, Yusuke; Di Carlo, Dino; Hosokawa, Yoichiroh; Uemura, Sotaro; Sugimura, Takeaki; Ozeki, Yasuyuki; Goda, Keisuke
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Sequentially addressable dielectrophoretic array for high-throughput sorting of large-volume biological compartments
err2020-05-29
err72
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errIsozaki, A.; Nakagawa, Y.; Loo, M. H.; Shibata, Y.; Tanaka, N.; Setyaningrum, D. L.; Park, J-W; Shirasaki, Y.; Mikami, H.; Huang, D.; Tsoi, H.; Riche, C. T.; Ota, T.; Miwa, H.; Kanda, Y.; Ito, T.; Yamada, K.; Iwata, O.; Suzuki, K.; Ohnuki, S.; Ohya, Y.; Kato, Y.; Hasunuma, T.; Matsusaka, S.; Yamagishi, M.; Yazawa, M.; Uemura, S.; Nagasawa, K.; Watarai, H.; Di Carlo, D.; Goda, K.
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Intelligent image-activated cell sorting 2.0
err2020-01-01
err113
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errIsozaki, Akihiro; Mikami, Hideharu; Tezuka, Hiroshi; Matsumura, Hiroki; Huang, Kangrui; Akamine, Marino; Hiramatsu, Kotaro; Iino, Takanori; Ito, Takuro; Karakawa, Hiroshi; Kasai, Yusuke; Li, Yan; Nakagawa, Yuta; Ohnuki, Shinsuke; Ota, Tadataka; Qian, Yong; Sakuma, Shinya; Sekiya, Takeichiro; Shirasaki, Yoshitaka; Suzuki, Nobutake; Tayyabi, Ehsen; Wakamiya, Tsubasa; Xu, Muzhen; Yamagishi, Mai; Yan, Haochen; Yu, Qiang; Yan, Sheng; Yuan, Dan; Zhang, Wei; Zhao, Yaqi; Arai, Fumihito; Campbell, Robert E.; Danelon, Christophe; Di Carlo, Dino; Hiraki, Kei; Hoshino, Yu; Hosokawa, Yoichiroh; Inaba, Mary; Nakagawa, Atsuhiro; Ohya, Yoshikazu; Oikawa, Minoru; Uemura, Sotaro; Ozeki, Yasuyuki; Sugimura, Takeaki; Nitta, Nao; Goda, Keisuke
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A practical guide to intelligent image-activated cell sorting (vol 14, pg 2370, 2019)
err2019-10-17
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errOAAI
errIsozaki, Akihiro; Mikami, Hideharu; Hiramatsu, Kotaro; Sakuma, Shinya; Kasai, Yusuke; Iino, Takanori; Yamano, Takashi; Yasumoto, Atsushi; Oguchi, Yusuke; Suzuki, Nobutake; Shirasaki, Yoshitaka; Endo, Taichiro; Ito, Takuro; Hiraki, Kei; Yamada, Makoto; Matsusaka, Satoshi; Hayakawa, Takeshi; Fukuzawa, Hideya; Yatomi, Yutaka; Arai, Fumihito; Di Carlo, Dino; Nakagawa, Atsuhiro; Hoshino, Yu; Hosokawa, Yoichiroh; Uemura, Sotaro; Sugimura, Takeaki; Ozeki, Yasuyuki; Nitta, Nao; Goda, Keisuke
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A practical guide to intelligent image-activated cell sorting
err2019-07-05
err83
PREAI
errIsozaki, Akihiro; Mikami, Hideharu; Hiramatsu, Kotaro; Sakuma, Shinya; Kasai, Yusuke; Iino, Takanori; Yamano, Takashi; Yasumoto, Atsushi; Oguchi, Yusuke; Suzuki, Nobutake; Shirasaki, Yoshitaka; Endo, Taichiro; Ito, Takuro; Hiraki, Kei; Yamada, Makoto; Matsusaka, Satoshi; Hayakawa, Takeshi; Fukuzawa, Hideya; Yatomi, Yutaka; Arai, Fumihito; Di Carlo, Dino; Nakagawa, Atsuhiro; Hoshino, Yu; Hosokawa, Yoichiroh; Uemura, Sotaro; Sugimura, Takeaki; Ozeki, Yasuyuki; Nitta, Nao; Goda, Keisuke
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A20 prevents inflammasome-dependent arthritis by inhibiting macrophage necroptosis through its ZnF7 ubiquitin-binding domain
err2019-05-13
err129
PREAI
errPolykratis, Apostolos; Martens, Arne; Eren, Remzi Onur; Shirasaki, Yoshitaka; Yamagishi, Mai; Yamaguchi, Yoshifumi; Uemura, Sotaro; Miura, Masayuki; Holzmann, Bernhard; Kollias, George; Armaka, Marietta; van Loo, Geert; Pasparakis, Manolis
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A FRET biosensor for necroptosis uncovers two different modes of the release of DAMPs (vol 9, pg 4457, 2018)
err2019-04-25
err2
errOAAI
errMurai, Shin; Yamaguchi, Yoshifumi; Shirasaki, Yoshitaka; Yamagishi, Mai; Shindo, Ryodai; Hildebrand, Joanne M.; Miura, Ryosuke; Nakabayashi, Osamu; Totsuka, Mamoru; Tomida, Taichiro; Adachi-Akahane, Satomi; Uemura, Sotaro; Silke, John; Yagita, Hideo; Miura, Masayuki; Nakano, Hiroyasu
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A FRET biosensor for necroptosis uncovers two different modes of the release of DAMPs
err2018-10-26
err65
errOAAI
errMurai, Shin; Yamaguchi, Yoshifumi; Shirasaki, Yoshitaka; Yamagishi, Mai; Shindo, Ryodai; Hildebrand, Joanne M.; Miura, Ryosuke; Nakabayashi, Osamu; Totsuka, Mamoru; Tomida, Taichiro; Adachi-Akahane, Satomi; Uemura, Sotaro; Silke, John; Yagita, Hideo; Miura, Masayuki; Nakano, Hiroyasu
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Construction of a system using a deep learning algorithm to count cell numbers in nanoliter wells for viable single-cell experiments
err2017-12-04
err7
errOAAI
errKamatani, Takashi; Fukunaga, Koichi; Miyata, Kaede; Shirasaki, Yoshitaka; Tanaka, Junji; Baba, Rie; Matsusaka, Masako; Kamatani, Naoyuki; Moro, Kazuyo; Betsuyaku, Tomoko; Uemura, Sotaro
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