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C

Christoph Flamm

University of Vienna

31H-index
187Paper Count
2.0WCitation Count
Published Papers 25
Publication Date
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Thermodynamic ranking of pathways in reaction networks
errJOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT
IF1.9
err2025-12-01
err0
PREAI
errGagrani, Praful; Lauber, Nino; Smith, Eric; Flamm, Christoph
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Assembly in Directed Hypergraphs
errPROCEEDINGS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES
IF3
err2025-10-15
err0
PREAI
errFlamm, Christoph; Merkle, Daniel; Stadler, Peter F.
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Linking root length and surface area to yield: variety-specific root plasticity in winter wheat across contrasting European environments
errANNALS OF BOTANY
IF3.6
err2025-08-01
err3
errOAAI
errDurand-Maniclas, F.; Heinemann, H.; Seidel, F.; Ciulla, F.; de la Barcena, T. G.; Camenzind, M.; Corrado, S.; Csuros, Z.; Czako, Zs; Eylenbosch, D.; Ficke, A.; Flamm, C.; Herrera, J. M.; Horakova, V; Hund, A.; Lueddeke, F.; Platz, F.; Poos, B.; Rasse, D. P.; da Silva-Lopes, M.; Toleikiene, M.; Versuliene, A.; Visse-Mansiaux, M.; Yu, K.; Don, A.; Hirte, J.
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Finding Thermodynamically Favorable Pathways in Chemical Reaction Networks Using Flows in Hypergraphs and Mixed-Integer Linear Programming
errJournal of Chemical Information and Modeling
IF5.3
err2025-06-10
err0
PREAI
errAdittya Pal; Rolf Fagerberg; Jakob Lykke Andersen; Christoph Flamm; Peter Dittrich; Daniel Merkle
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SynTemp: Efficient Extraction of Graph-Based Reaction Rules from Large-Scale Reaction Databases
errJOURNAL OF CHEMICAL INFORMATION AND MODELING
IF5.3
err2025-02-28
err0
errOAAI
errPhan, Tieu-Long; Weinbauer, Klaus; Laffitte, Marcos E. Gonzalez; Pan, Yingjie; Merkle, Daniel; Andersen, Jakob L.; Fagerberg, Rolf; Flamm, Christoph; Stadler, Peter F.
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Representing Catalytic Mechanisms with Rule Composition
errJOURNAL OF CHEMICAL INFORMATION AND MODELING
IF5.3
err2022-11-03
err2
errOAAI
errAnderson, Jakob L.; Fagerberg, Rolf; Flamm, Christoph; Fontana, Walter; Kolcak, Juri; Laurent, Christophe V. F. P.; Merkle, Daniel; Nojgaard, Nikolai
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What makes a reaction network chemical?
errJOURNAL OF CHEMINFORMATICS
IF5.7
err2022-09-19
err13
errOAAI
errMueller, Stefan; Flamm, Christoph; Stadler, Peter F.
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Generic Context-Aware Group Contributions
errIEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS
IF3.4
err2022-01-01
err2
errOAAI
errFlamm, Christoph; Hellmuth, Marc; Merkle, Daniel; Nojgaard, Nikolai; Stadler, Peter F.
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EHreact: Extended Hasse Diagrams for the Extraction and Scoring of Enzymatic Reaction Templates
errJOURNAL OF CHEMICAL INFORMATION AND MODELING
IF5.3
err2021-09-29
err8
errOAAI
errHeid, Esther; Goldman, Samuel; Sankaranarayanan, Karthik; Coley, Connor W.; Flamm, Christoph; Green, William H.
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Minimal metabolism: A key concept to investigate the origins and nature of biological systems
errBIOESSAYS
IF2.7
err2021-08-23
err14
errOAAI
errLauber, Nino; Flamm, Christoph; Ruiz-Mirazo, Kepa
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errSave
Chemical Transformation Motifs-Modelling Pathways as Integer Hyperflows
errIEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS
IF3.4
err2019-03-01
err33
errOAAI
errAndersen, Jakob L.; Flamm, Christoph; Merkle, Daniel; Stadler, Peter F.
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errSave
Efficient computation of co-transcriptional RNA-ligand interaction dynamics
errMETHODS
IF4.3
err2018-07-01
err7
errOAAI
errWolfinger, Michael T.; Flamm, Christoph; Hofacker, Ivo L.
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In silico design of ligand triggered RNA switches
errMETHODS
IF4.3
err2018-07-01
err14
errOAAI
errFindeiss, Sven; Hammer, Stefan; Wolfinger, Michael T.; Kuehnl, Felix; Flamm, Christoph; Hofacker, Ivo L.
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errSave
Finding the K best synthesis plans
errJOURNAL OF CHEMINFORMATICS
IF5.7
err2018-04-05
err8
errOAAI
errFagerberg, Rolf; Flamm, Christoph; Kianian, Rojin; Merkle, Daniel; Stadler, Peter F.
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An intermediate level of abstraction for computational systems chemistry
errPHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES
IF3.7
err2017-11-13
err17
errOAAI
errAndersen, Jakob L.; Flamm, Christoph; Merkle, Daniel; Stadler, Peter F.
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errSave
Practical Guidelines for Incorporating Knowledge-Based and Data-Driven Strategies into the Inference of Gene Regulatory Networks
errIEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS
IF3.4
err2016-01-01
err6
PREAI
errHsiao, Yu-Ting; Lee, Wei-Po; Yang, Wei; Mueller, Stefan; Flamm, Christoph; Hofacker, Ivo; Kuegler, Philipp
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Sequence-controlled RNA self-processing: computational design, biochemical analysis, and visualization by AFM
errRNA
IF5
err2015-05-21
err11
errOAAI
errPetkovic, Sonja; Badelt, Stefan; Block, Stephan; Flamm, Christoph; Delcea, Mihaela; Hofacker, Ivo; Mueller, Sabine
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Computational Design of RNAs with Complex Energy Landscapes
errBIOPOLYMERS
IF3.2
err2013-09-23
err27
PREAI
errSiederdissen, Christian Hoener Zu; Hammer, Stefan; Abfalter, Ingrid; Hofacker, Ivo L.; Flamm, Christoph; Stadler, Peter F.
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Physiological environment induces quick response - slow exhaustion reactions
errFRONTIERS IN PHYSIOLOGY
IF3.4
err2011-01-01
err10
errOAAI
errHiroi, Noriko; Lu, James; Iba, Keisuke; Tabira, Akito; Yamashita, Shuji; Okada, Yasunori; Flamm, Christoph; Oka, Kotaro; Koehlet, Gottfried; Funahashi, Akira
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BarMap: RNA folding on dynamic energy landscapes
errRNA
IF5
err2010-05-26
err46
errOAAI
errHofacker, Ivo L.; Flamm, Christoph; Heine, Christian; Wolfinger, Michael T.; Scheuermann, Gerik; Stadler, Peter F.
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Research Directions

No research directions
Co-authors
Cooperation Journals
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Peter F. Stadler
H-index: 119 · Papers: 1.3K
G
Günter P. Wagner
H-index: 86 · Papers: 523
W
William H. Green
H-index: 85 · Papers: 1.1K
M
Martijn A. Huynen
H-index: 81 · Papers: 431
S
Stefan C. Müller
H-index: 76 · Papers: 731
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