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Shanka Subhra Mondal
Princeton University
14H-index
47Paper Count
681Citation Count
Published Papers 11
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A brain-inspired agentic architecture to improve planning with LLMs.png)
Nature Communications.png)
2025-09-30
0
OAAI
Taylor Webb; Shanka Subhra Mondal; Ida Momennejad
Nature CommunicationsIF15.7
2025-09-300OAAITaylor Webb; Shanka Subhra Mondal; Ida Momennejad.png){kind=icon}
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SaveThe synaptic architecture of layer 5 thick tufted excitatory neurons in mouse visual cortex2025-07-280
OAAIAgnes L. Bodor; Casey M. Schneider-Mizell; Chi Zhang; Leila Elabbady; Alex Mallen; Andi Bergeson; Derrick Brittain; JoAnn Buchanan; Daniel J. Bumbarger; Rachel Dalley; Clare Gamlin; Emily Joyce; Daniel Kapner; Sam Kinn; Gayathri Mahalingam; Sharmishtaa Seshamani; Shelby Suckow; Marc Takeno; Russel Torres; Wenjing Yin; J. Alexander Bae; Manuel A. Castro; Sven Dorkenwald; Akhilesh Halageri; Zhen Jia; Chris Jordan; Nico Kemnitz; Kisuk Lee; Kai Li; Ran Lu; Thomas Macrina; Eric Mitchell; Shanka Subhra Mondal; Shang Mu; Barak Nehoran; Sergiy Popovych; William Silversmith; Nicholas L. Turner; Szi-chieh Yu; William Wong; Jingpeng Wu; Brendan Celii; Luke Campagnola; Stephanie C. Seeman; Tim Jarsky; Naixin Ren; Anton Arkhipov; Jacob Reimer; H. Sebastian Seung; R. Clay Reid; Forrest Collman; Nuno Maçarico da Costa
2025-07-280OAAIAgnes L. Bodor; Casey M. Schneider-Mizell; Chi Zhang; Leila Elabbady; Alex Mallen; Andi Bergeson; Derrick Brittain; JoAnn Buchanan; Daniel J. Bumbarger; Rachel Dalley; Clare Gamlin; Emily Joyce; Daniel Kapner; Sam Kinn; Gayathri Mahalingam; Sharmishtaa Seshamani; Shelby Suckow; Marc Takeno; Russel Torres; Wenjing Yin; J. Alexander Bae; Manuel A. Castro; Sven Dorkenwald; Akhilesh Halageri; Zhen Jia; Chris Jordan; Nico Kemnitz; Kisuk Lee; Kai Li; Ran Lu; Thomas Macrina; Eric Mitchell; Shanka Subhra Mondal; Shang Mu; Barak Nehoran; Sergiy Popovych; William Silversmith; Nicholas L. Turner; Szi-chieh Yu; William Wong; Jingpeng Wu; Brendan Celii; Luke Campagnola; Stephanie C. Seeman; Tim Jarsky; Naixin Ren; Anton Arkhipov; Jacob Reimer; H. Sebastian Seung; R. Clay Reid; Forrest Collman; Nuno Maçarico da CostaShareSaveInhibitory specificity from a connectomic census of mouse visual cortex (vol 640, pg 448, 2025)NATURE2025-05-190OAAISchneider-Mizell, Casey M.; Bodor, Agnes L.; Brittain, Derrick; Buchanan, Joann; Bumbarger, Daniel J.; Elabbady, Leila; Gamlin, Clare; Kapner, Daniel; Kinn, Sam; Mahalingam, Gayathri; Seshamani, Sharmishtaa; Suckow, Shelby; Takeno, Marc; Torres, Russel; Yin, Wenjing; Dorkenwald, Sven; Bae, J. Alexander; Castro, Manuel A.; Halageri, Akhilesh; Jia, Zhen; Jordan, Chris; Kemnitz, Nico; Lee, Kisuk; Li, Kai; Lu, Ran; Macrina, Thomas; Mitchell, Eric; Mondal, Shanka Subhra; Mu, Shang; Nehoran, Barak; Popovych, Sergiy; Silversmith, William; Turner, Nicholas L.; Wong, William; Wu, Jingpeng; Reimer, Jacob; Tolias, Andreas S.; Seung, H. Sebastian; Reid, R. Clay; Collman, Forrest; da Costa, Nuno Macarico
NATUREIF48.5
2025-05-190OAAISchneider-Mizell, Casey M.; Bodor, Agnes L.; Brittain, Derrick; Buchanan, Joann; Bumbarger, Daniel J.; Elabbady, Leila; Gamlin, Clare; Kapner, Daniel; Kinn, Sam; Mahalingam, Gayathri; Seshamani, Sharmishtaa; Suckow, Shelby; Takeno, Marc; Torres, Russel; Yin, Wenjing; Dorkenwald, Sven; Bae, J. Alexander; Castro, Manuel A.; Halageri, Akhilesh; Jia, Zhen; Jordan, Chris; Kemnitz, Nico; Lee, Kisuk; Li, Kai; Lu, Ran; Macrina, Thomas; Mitchell, Eric; Mondal, Shanka Subhra; Mu, Shang; Nehoran, Barak; Popovych, Sergiy; Silversmith, William; Turner, Nicholas L.; Wong, William; Wu, Jingpeng; Reimer, Jacob; Tolias, Andreas S.; Seung, H. Sebastian; Reid, R. Clay; Collman, Forrest; da Costa, Nuno MacaricoShareSavePerisomatic ultrastructure efficiently classifies cells in mouse cortexNATURE2025-04-097OAAIElabbady, Leila; Seshamani, Sharmishtaa; Mu, Shang; Mahalingam, Gayathri; Schneider-Mizell, Casey M.; Bodor, Agnes L.; Bae, J. Alexander; Brittain, Derrick; Buchanan, Joann; Bumbarger, Daniel J.; Castro, Manuel A.; Dorkenwald, Sven; Halageri, Akhilesh; Jia, Zhen; Jordan, Chris; Kapner, Dan; Kemnitz, Nico; Kinn, Sam; Lee, Kisuk; Li, Kai; Lu, Ran; Macrina, Thomas; Mitchell, Eric; Mondal, Shanka Subhra; Nehoran, Barak; Popovych, Sergiy; Silversmith, William; Takeno, Marc; Torres, Russel; Turner, Nicholas L.; Wong, William; Wu, Jingpeng; Yin, Wenjing; Yu, Szi-chieh; Seung, H. Sebastian; Reid, R. Clay; da Costa, Nuno Macarico
NATUREIF48.5
2025-04-097OAAIElabbady, Leila; Seshamani, Sharmishtaa; Mu, Shang; Mahalingam, Gayathri; Schneider-Mizell, Casey M.; Bodor, Agnes L.; Bae, J. Alexander; Brittain, Derrick; Buchanan, Joann; Bumbarger, Daniel J.; Castro, Manuel A.; Dorkenwald, Sven; Halageri, Akhilesh; Jia, Zhen; Jordan, Chris; Kapner, Dan; Kemnitz, Nico; Kinn, Sam; Lee, Kisuk; Li, Kai; Lu, Ran; Macrina, Thomas; Mitchell, Eric; Mondal, Shanka Subhra; Nehoran, Barak; Popovych, Sergiy; Silversmith, William; Takeno, Marc; Torres, Russel; Turner, Nicholas L.; Wong, William; Wu, Jingpeng; Yin, Wenjing; Yu, Szi-chieh; Seung, H. Sebastian; Reid, R. Clay; da Costa, Nuno MacaricoShareSaveConnectomics of predicted Sst transcriptomic types in mouse visual cortexNATURE2025-04-095OAAIGamlin, Clare R.; Schneider-Mizell, Casey M.; Mallory, Matthew; Elabbady, Leila; Gouwens, Nathan; Williams, Grace; Mukora, Alice; Dalley, Rachel; Bodor, Agnes L.; Brittain, Derrick; Buchanan, JoAnn; Bumbarger, Daniel J.; Joyce, Emily; Kapner, Daniel; Kinn, Sam; Mahalingam, Gayathri; Seshamani, Sharmishtaa; Takeno, Marc; Torres, Russel; Yin, Wenjing; Nicovich, Philip R.; Bae, J. Alexander; Castro, Manuel A.; Dorkenwald, Sven; Halageri, Akhilesh; Jia, Zhen; Jordan, Chris; Kemnitz, Nico; Lee, Kisuk; Li, Kai; Lu, Ran; Macrina, Thomas; Mitchell, Eric; Mondal, Shanka Subhra; Mu, Shang; Nehoran, Barak; Popovych, Sergiy; Silversmith, William; Turner, Nicholas L.; Wong, William; Wu, Jingpeng; Yu, Szi-chieh; Berg, Jim; Jarsky, Tim; Lee, Brian; Seung, H. Sebastian; Zeng, Hongkui; Reid, R. Clay; Collman, Forrest; da Costa, Nuno Macarico
NATUREIF48.5
2025-04-095OAAIGamlin, Clare R.; Schneider-Mizell, Casey M.; Mallory, Matthew; Elabbady, Leila; Gouwens, Nathan; Williams, Grace; Mukora, Alice; Dalley, Rachel; Bodor, Agnes L.; Brittain, Derrick; Buchanan, JoAnn; Bumbarger, Daniel J.; Joyce, Emily; Kapner, Daniel; Kinn, Sam; Mahalingam, Gayathri; Seshamani, Sharmishtaa; Takeno, Marc; Torres, Russel; Yin, Wenjing; Nicovich, Philip R.; Bae, J. Alexander; Castro, Manuel A.; Dorkenwald, Sven; Halageri, Akhilesh; Jia, Zhen; Jordan, Chris; Kemnitz, Nico; Lee, Kisuk; Li, Kai; Lu, Ran; Macrina, Thomas; Mitchell, Eric; Mondal, Shanka Subhra; Mu, Shang; Nehoran, Barak; Popovych, Sergiy; Silversmith, William; Turner, Nicholas L.; Wong, William; Wu, Jingpeng; Yu, Szi-chieh; Berg, Jim; Jarsky, Tim; Lee, Brian; Seung, H. Sebastian; Zeng, Hongkui; Reid, R. Clay; Collman, Forrest; da Costa, Nuno MacaricoShareSaveFunctional connectomics reveals general wiring rule in mouse visual cortexNATURE2025-04-094OAAIDing, Zhuokun; Fahey, Paul G.; Papadopoulos, Stelios; Wang, Eric Y.; Celii, Brendan; Papadopoulos, Christos; Chang, Andersen; Kunin, Alexander B.; Tran, Dat; Fu, Jiakun; Ding, Zhiwei; Patel, Saumil; Ntanavara, Lydia; Froebe, Rachel; Ponder, Kayla; Muhammad, Taliah; Bae, J. Alexander; Bodor, Agnes L.; Brittain, Derrick; Buchanan, Joann; Bumbarger, Daniel J.; Castro, Manuel A.; Cobos, Erick; Dorkenwald, Sven; Elabbady, Leila; Halageri, Akhilesh; Jia, Zhen; Jordan, Chris; Kapner, Dan; Kemnitz, Nico; Kinn, Sam; Lee, Kisuk; Li, Kai; Lu, Ran; Macrina, Thomas; Mahalingam, Gayathri; Mitchell, Eric; Mondal, Shanka Subhra; Mu, Shang; Nehoran, Barak; Popovych, Sergiy; Schneider-Mizell, Casey M.; Silversmith, William; Takeno, Marc; Torres, Russel; Turner, Nicholas L.; Wong, William; Wu, Jingpeng; Yin, Wenjing; Yu, Szi-chieh; Yatsenko, Dimitri; Froudarakis, Emmanouil; Sinz, Fabian; Josic, Kresimir; Rosenbaum, Robert; Seung, H. Sebastian; Collman, Forrest; da Costa, Nuno Macarico; Reid, R. Clay; Walker, Edgar Y.; Pitkow, Xaq; Reimer, Jacob
NATUREIF48.5
2025-04-094OAAIDing, Zhuokun; Fahey, Paul G.; Papadopoulos, Stelios; Wang, Eric Y.; Celii, Brendan; Papadopoulos, Christos; Chang, Andersen; Kunin, Alexander B.; Tran, Dat; Fu, Jiakun; Ding, Zhiwei; Patel, Saumil; Ntanavara, Lydia; Froebe, Rachel; Ponder, Kayla; Muhammad, Taliah; Bae, J. Alexander; Bodor, Agnes L.; Brittain, Derrick; Buchanan, Joann; Bumbarger, Daniel J.; Castro, Manuel A.; Cobos, Erick; Dorkenwald, Sven; Elabbady, Leila; Halageri, Akhilesh; Jia, Zhen; Jordan, Chris; Kapner, Dan; Kemnitz, Nico; Kinn, Sam; Lee, Kisuk; Li, Kai; Lu, Ran; Macrina, Thomas; Mahalingam, Gayathri; Mitchell, Eric; Mondal, Shanka Subhra; Mu, Shang; Nehoran, Barak; Popovych, Sergiy; Schneider-Mizell, Casey M.; Silversmith, William; Takeno, Marc; Torres, Russel; Turner, Nicholas L.; Wong, William; Wu, Jingpeng; Yin, Wenjing; Yu, Szi-chieh; Yatsenko, Dimitri; Froudarakis, Emmanouil; Sinz, Fabian; Josic, Kresimir; Rosenbaum, Robert; Seung, H. Sebastian; Collman, Forrest; da Costa, Nuno Macarico; Reid, R. Clay; Walker, Edgar Y.; Pitkow, Xaq; Reimer, JacobShareSaveNEURD offers automated proofreading and feature extraction for connectomicsNATURE2025-04-095OAAICelii, Brendan; Papadopoulos, Stelios; Ding, Zhuokun; Fahey, Paul G.; Wang, Eric; Papadopoulos, Christos; Kunin, Alexander B.; Patel, Saumil; Bae, J. Alexander; Bodor, Agnes L.; Brittain, Derrick; Buchanan, Joann; Bumbarger, Daniel J.; Castro, Manuel A.; Cobos, Erick; Dorkenwald, Sven; Elabbady, Leila; Halageri, Akhilesh; Jia, Zhen; Jordan, Chris; Kapner, Dan; Kemnitz, Nico; Kinn, Sam; Lee, Kisuk; Li, Kai; Lu, Ran; Macrina, Thomas; Mahalingam, Gayathri; Mitchell, Eric; Mondal, Shanka Subhra; Mu, Shang; Nehoran, Barak; Popovych, Sergiy; Schneider-Mizell, Casey M.; Silversmith, William; Takeno, Marc; Torres, Russel; Turner, Nicholas L.; Wong, William; Wu, Jingpeng; Yu, Szi-chieh; Yin, Wenjing; Xenes, Daniel; Kitchell, Lindsey M.; Rivlin, Patricia K.; Rose, Victoria A.; Bishop, Caitlyn A.; Wester, Brock; Froudarakis, Emmanouil; Walker, Edgar Y.; Sinz, Fabian; Seung, H. Sebastian; Collman, Forrest; da Costa, Nuno Macarico; Reid, R. Clay; Pitkow, Xaq; Tolias, Andreas S.; Reimer, Jacob
NATUREIF48.5
2025-04-095OAAICelii, Brendan; Papadopoulos, Stelios; Ding, Zhuokun; Fahey, Paul G.; Wang, Eric; Papadopoulos, Christos; Kunin, Alexander B.; Patel, Saumil; Bae, J. Alexander; Bodor, Agnes L.; Brittain, Derrick; Buchanan, Joann; Bumbarger, Daniel J.; Castro, Manuel A.; Cobos, Erick; Dorkenwald, Sven; Elabbady, Leila; Halageri, Akhilesh; Jia, Zhen; Jordan, Chris; Kapner, Dan; Kemnitz, Nico; Kinn, Sam; Lee, Kisuk; Li, Kai; Lu, Ran; Macrina, Thomas; Mahalingam, Gayathri; Mitchell, Eric; Mondal, Shanka Subhra; Mu, Shang; Nehoran, Barak; Popovych, Sergiy; Schneider-Mizell, Casey M.; Silversmith, William; Takeno, Marc; Torres, Russel; Turner, Nicholas L.; Wong, William; Wu, Jingpeng; Yu, Szi-chieh; Yin, Wenjing; Xenes, Daniel; Kitchell, Lindsey M.; Rivlin, Patricia K.; Rose, Victoria A.; Bishop, Caitlyn A.; Wester, Brock; Froudarakis, Emmanouil; Walker, Edgar Y.; Sinz, Fabian; Seung, H. Sebastian; Collman, Forrest; da Costa, Nuno Macarico; Reid, R. Clay; Pitkow, Xaq; Tolias, Andreas S.; Reimer, JacobShareSaveAn unsupervised map of excitatory neuron dendritic morphology in the mouse visual cortexNATURE COMMUNICATIONS2025-04-090OAAIWeis, Marissa A.; Papadopoulos, Stelios; Hansel, Laura; Lueddecke, Timo; Celii, Brendan; Fahey, Paul G.; Wang, Eric Y.; Bae, J. Alexander; Bodor, Agnes L.; Brittain, Derrick; Buchanan, JoAnn; Bumbarger, Daniel J.; Castro, Manuel A.; Collman, Forrest; da Costa, Nuno Macarico; Dorkenwald, Sven; Elabbady, Leila; Halageri, Akhilesh; Jia, Zhen; Jordan, Chris; Kapner, Dan; Kemnitz, Nico; Kinn, Sam; Lee, Kisuk; Li, Kai; Lu, Ran; Macrina, Thomas; Mahalingam, Gayathri; Mitchell, Eric; Mondal, Shanka Subhra; Mu, Shang; Nehoran, Barak; Popovych, Sergiy; Reid, R. Clay; Schneider-Mizell, Casey M.; Seung, H. Sebastian; Silversmith, William; Takeno, Marc; Torres, Russel; Turner, Nicholas L.; Wong, William; Wu, Jingpeng; Yin, Wenjing; Yu, Szi-chieh; Reimer, Jacob; Berens, Philipp; Tolias, Andreas S.
NATURE COMMUNICATIONSIF15.7
2025-04-090OAAIWeis, Marissa A.; Papadopoulos, Stelios; Hansel, Laura; Lueddecke, Timo; Celii, Brendan; Fahey, Paul G.; Wang, Eric Y.; Bae, J. Alexander; Bodor, Agnes L.; Brittain, Derrick; Buchanan, JoAnn; Bumbarger, Daniel J.; Castro, Manuel A.; Collman, Forrest; da Costa, Nuno Macarico; Dorkenwald, Sven; Elabbady, Leila; Halageri, Akhilesh; Jia, Zhen; Jordan, Chris; Kapner, Dan; Kemnitz, Nico; Kinn, Sam; Lee, Kisuk; Li, Kai; Lu, Ran; Macrina, Thomas; Mahalingam, Gayathri; Mitchell, Eric; Mondal, Shanka Subhra; Mu, Shang; Nehoran, Barak; Popovych, Sergiy; Reid, R. Clay; Schneider-Mizell, Casey M.; Seung, H. Sebastian; Silversmith, William; Takeno, Marc; Torres, Russel; Turner, Nicholas L.; Wong, William; Wu, Jingpeng; Yin, Wenjing; Yu, Szi-chieh; Reimer, Jacob; Berens, Philipp; Tolias, Andreas S.ShareSaveCAVE: Connectome Annotation Versioning EngineNATURE METHODS2025-04-092OAAIDorkenwald, Sven; Schneider-Mizell, Casey M.; Brittain, Derrick; Halageri, Akhilesh; Jordan, Chris; Kemnitz, Nico; Castro, Manual A.; Silversmith, William; Maitin-Shephard, Jeremy; Troidl, Jakob; Pfister, Hanspeter; Gillet, Valentin; Xenes, Daniel; Bae, J. Alexander; Bodor, Agnes L.; Buchanan, Joann; Bumbarger, Daniel J.; Elabbady, Leila; Jia, Zhen; Kapner, Daniel; Kinn, Sam; Lee, Kisuk; Li, Kai; Lu, Ran; Macrina, Thomas; Mahalingam, Gayathri; Mitchell, Eric; Mondal, Shanka Subhra; Mu, Shang; Nehoran, Barak; Popovych, Sergiy; Takeno, Marc; Torres, Russel; Turner, Nicholas L.; Wong, William; Wu, Jingpeng; Yin, Wenjing; Yu, Szi-chieh; Reid, R. Clay; da Costa, Nuno Macarico; Seung, H. Sebastian
NATURE METHODSIF32.1
2025-04-092OAAIDorkenwald, Sven; Schneider-Mizell, Casey M.; Brittain, Derrick; Halageri, Akhilesh; Jordan, Chris; Kemnitz, Nico; Castro, Manual A.; Silversmith, William; Maitin-Shephard, Jeremy; Troidl, Jakob; Pfister, Hanspeter; Gillet, Valentin; Xenes, Daniel; Bae, J. Alexander; Bodor, Agnes L.; Buchanan, Joann; Bumbarger, Daniel J.; Elabbady, Leila; Jia, Zhen; Kapner, Daniel; Kinn, Sam; Lee, Kisuk; Li, Kai; Lu, Ran; Macrina, Thomas; Mahalingam, Gayathri; Mitchell, Eric; Mondal, Shanka Subhra; Mu, Shang; Nehoran, Barak; Popovych, Sergiy; Takeno, Marc; Torres, Russel; Turner, Nicholas L.; Wong, William; Wu, Jingpeng; Yin, Wenjing; Yu, Szi-chieh; Reid, R. Clay; da Costa, Nuno Macarico; Seung, H. SebastianShareSaveInhibitory specificity from a connectomic census of mouse visual cortexNATURE2025-04-096OAAISchneider-Mizell, Casey M.; Bodor, Agnes L.; Brittain, Derrick; Buchanan, Joann; Bumbarger, Daniel J.; Elabbady, Leila; Gamlin, Clare; Kapner, Daniel; Kinn, Sam; Mahalingam, Gayathri; Seshamani, Sharmishtaa; Suckow, Shelby; Takeno, Marc; Torres, Russel; Yin, Wenjing; Dorkenwald, Sven; Bae, J. Alexander; Castro, Manuel A.; Halageri, Akhilesh; Jia, Zhen; Jordan, Chris; Kemnitz, Nico; Lee, Kisuk; Li, Kai; Lu, Ran; Macrina, Thomas; Mitchell, Eric; Mondal, Shanka Subhra; Mu, Shang; Nehoran, Barak; Popovych, Sergiy; Silversmith, William; Turner, Nicholas L.; Wong, William; Wu, Jingpeng; Reimer, Jacob; Tolias, Andreas S.; Seung, H. Sebastian; Reid, R. Clay; Collman, Forrest; da Costa, Nuno Macarico
NATUREIF48.5
2025-04-096OAAISchneider-Mizell, Casey M.; Bodor, Agnes L.; Brittain, Derrick; Buchanan, Joann; Bumbarger, Daniel J.; Elabbady, Leila; Gamlin, Clare; Kapner, Daniel; Kinn, Sam; Mahalingam, Gayathri; Seshamani, Sharmishtaa; Suckow, Shelby; Takeno, Marc; Torres, Russel; Yin, Wenjing; Dorkenwald, Sven; Bae, J. Alexander; Castro, Manuel A.; Halageri, Akhilesh; Jia, Zhen; Jordan, Chris; Kemnitz, Nico; Lee, Kisuk; Li, Kai; Lu, Ran; Macrina, Thomas; Mitchell, Eric; Mondal, Shanka Subhra; Mu, Shang; Nehoran, Barak; Popovych, Sergiy; Silversmith, William; Turner, Nicholas L.; Wong, William; Wu, Jingpeng; Reimer, Jacob; Tolias, Andreas S.; Seung, H. Sebastian; Reid, R. Clay; Collman, Forrest; da Costa, Nuno MacaricoShareSaveDeterminantal point process attention over grid cell code supports out of distribution generalizationELIFE2024-08-010OAAIMondal, Shanka Subhra; Frankland, Steven; Webb, Taylor W.; Cohen, Jonathan D.
ELIFEIF0
2024-08-010OAAIMondal, Shanka Subhra; Frankland, Steven; Webb, Taylor W.; Cohen, Jonathan D.ShareSaveResearch Directions
No research directions