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Thomas Hankemeier

Leiden Academic Centre for Drug Research

77H-index
557Paper Count
2.7WCitation Count
Published Papers 321
Publication Date
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Resolving drug uptake heterogeneity in 3D organ on chip models via live single-cell microsampling and ion mobility mass spectrometry
errAnalytica Chimica Acta
IF6
err2026-08-03
err0
errOAAI
errVincent Lennard Verschoor; Laura Ann Castaneda; Arnaud Nicolas; Bas Trietsch; Thomas Hankemeier; Ahmed Ali
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An m/z- and Intensity-Based HRMS Clustering Algorithm Targeted toward Single-Cell Metabolomics
errJournal of the American Society for Mass Spectrometry
IF2.7
err2026-07-10
err0
errOAAI
errDirk Wevers; Laura Koldenhof; Laura Castaneda; Anouschka van der Zeeuw; Hellen Fass; Thomas Hankemeier; Charlie Clark; Ahmed Ali
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errSave
The blood metabolome of brain health in midlife and influences of genes, microbiome and exposome
errNature Aging
IF19.4
err2026-06-24
err0
errOAAI
errShahzad Ahmad; Tong Wu; Matthias Arnold; Thomas Hankemeier; Mohsen Ghanbari; Gennady Roshchupkin; André G. Uitterlinden; Kamil Borkowski; Julia Neitzel; Robert Kraaij; Cornelia M. van Duijn; M. Arfan Ikram; Rima Kaddurah-Daouk; Gabi Kastenmüller
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errSave
Foamy microglia link oxylipins to disease progression in multiple sclerosis
errNature Neuroscience
IF20
err2026-05-21
err0
errOAAI
errDaan van der Vliet; Xinyu Di; Tatiana M. Shamorkina; Claire Coulon-Bainier; Anto Pavlovic; Iris A. C. M. van der Vliet; Yingyu Zeng; Will Macnair; Noëlle van Egmond; J. Q. Alida Chen; Aletta M. R. van den Bosch; Hendrik J. Engelenburg; Dennis Wever; Matthew R. J. Mason; Wouter P. F. Driever; Berend Gagestein; Elise Dusseldorp; Marco van Eijk; Uwe Grether; Amy C. Harms; Thomas Hankemeier; Ludovic Collin; Albert J. R. Heck; Inge Huitinga; Mario van der Stelt
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Longitudinal metabolomic profiling of biogenic amines in plasma and CSF, and their correlation, reveals sex-specific and age changes in TgF344 Alzheimer’s disease transgenic and wildtype rats
errFluids and Barriers of the CNS
IF6.2
err2026-05-09
err0
errOAAI
errChunyuan Yin; Imke Nelen; Amy Harms; Robin Hartman; Sabine Bos; Charlotte Nijgh-van Kooij; Thomas Hankemeier; Alida Kindt; Elizabeth de Lange
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errSave
From Mythology to Methodology: Untargeted Single-Cell Metabolomics in R with MeDUSA
errJournal of the American Society for Mass Spectrometry
IF2.7
err2026-05-06
err0
PREAI
errLaura Ann Castaneda; Eric Hetzel; Fercan Gül; Thomas Hankemeier; Ahmed Ali
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errSave
Cold-Induced Lipidomic Remodelling Is Associated With Brown Adipose Tissue Mean Radiodensity in Humans
errdiabetes, obesity and metabolism
IF0
err2026-04-20
err0
errOAAI
errYu Zhang; Borja Martinez-Tellez; Alida Kindt; Nicolas Drouin; Amy Harms; Thomas Hankemeier; Jonatan R. Ruiz; Lucas Jurado-Fasoli
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errSave
Transforming clinical decisions with artificial intelligence: the HYPERMARKER project
errEuropean Heart Journal
IF35.6
err2026-04-07
err0
PREAI
errDipak Kotecha; Thomas Hankemeier; Diederick E Grobbee
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Volumetric absorptive microsampling for profiling of signaling lipids: a comparative analysis with whole blood and dried blood spots
errAnalytical and Bioanalytical Chemistry
IF3.8
err2026-04-05
err0
errOAAI
errManchu Umarani Thangavelu; Alida Kindt; Bert Wouters; Lieke Lamont; Hyung Lim Elfrink; Amy Harms; Thomas Hankemeier
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errSave
Pre- and post-diagnosis signalling lipid profiles in heart failure with preserved ejection fraction: a prospective cohort study
errEBioMedicine
IF10.8
err2026-03-27
err0
errOAAI
errLu Zhang; Tamas Szili-Torok; Lieke Lamont; Alida Kindt; Amy Harms; Stephan J.L. Bakker; Ron Gansevoort; Martin H. de Borst; Thomas Hankemeier
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errSave
Direct Infusion Acoustic Droplet Ejection Mass Spectrometry: Enabling High-Throughput Shotgun Lipidomics
errAnalytical Chemistry
IF6.7
err2026-03-25
err0
PREAI
errYu Zhang; Amy Harms; Lucas Jurado-Fasoli; Jonatan R. Ruiz; Nicolas Drouin; Thomas Hankemeier
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errSave
Energetic stress in combination with impaired fatty acid oxidation induces sequestration of CoA and adaptation of CoA metabolism
errthe febs journal
IF0
err2026-02-07
err0
errOAAI
errLigia Akemi Kiyuna; Christoff Odendaal; Madhulika Singh; Albert Gerding; Miriam Langelaar-Makkinje; Marianne van der Zwaag; Asmara Drachman; Vladimíra Cetkovská; Gaby Liem Foeng Kioen; Anne-Claire M. F. Martines; Nicolette C. A. Huijkman; Hein Schepers; Bart van de Sluis; Dirk-Jan Reijngoud; Ody C. M. Sibon; Amy C. Harms; Thomas Hankemeier; Barbara M. Bakker
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errSave
Lipidomic fingerprints reveal sex-, age-, and disease-dependent differences in the TgF344-AD transgenic rats
errMetabolomics
IF3.3
err2025-12-01
err0
errOAAI
errChunyuan Yin; Alida Kindt; Amy Harms; Robin Hartman; Thomas Hankemeier; Elizabeth de Lange
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errSave
XomicsToModel: omics data integration and generation of thermodynamically consistent metabolic models
errNature Protocols
IF16
err2025-12-01
err0
PREAI
errGerman Preciat; Agnieszka B. Wegrzyn; Xi Luo; Ines Thiele; Thomas Hankemeier; Ronan M. T. Fleming
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errSave
Matrix Effects in Untargeted LC-MS Metabolomics: From Creation to Compensation with Post-Column Infusion of Standards
errJournal of Chromatography A
IF4
err2025-11-01
err0
errOAAI
errPingping Zhu; Amy C. Harms; Pascal Maas; Manisha Bakas; Julia Josette Whien; Anne-Charlotte Dubbelman; Thomas Hankemeier
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errSave
Absolute quantification of polar metabolites using matrix-free calibration curves and post-column infusion of standards in HILIC-MS based metabolomics
errJournal of Chromatography A
IF4
err2025-10-31
err0
errOAAI
errMengle Zhu; Lieke Lamont; Pascal Maas; Amy C. Harms; Marian Beekman; P. Eline Slagboom; Anne-Charlotte Dubbelman; Thomas Hankemeier
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errSave
Plasma and feces multiomics unveil cognition-associated perturbations of chronic inflammatory pathways of the gut-microbiota–brain axis
errAlzheimer's & Dementia
IF11.1
err2025-10-30
err0
errOAAI
errFarideh Hosseinkhani; Claire Chevalier; Moira Marizzoni; Rahel Park; Sabine Bos; Alida Kindt Dunjko; Cornelia M. van Duijn; Amy C. Harms; Giovanni B. Frisoni; Thomas Hankemeier
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errSave
Correlation of Amine Concentrations in Blood and Cerebrospinal Fluid in Healthy Volunteers and Migraineurs
errInternational Journal of Molecular Sciences 2025, Vol. 26, Page 9899
IF0
err2025-10-11
err0
errOAAI
errAster V. E. Harder; Jan B. van Klinken; Robin M. van Dongen; Gerrit L. J. Onderwater; Michel D. Ferrari; Amy C. Harms; Thomas Hankemeier; Gisela M. Terwindt; Arn M. J. M. van den Maagdenberg
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errSave
Cytokine-Induced Barrier Dysfunction and Lipid Signaling in a Gut-On-Chip Model
errThe FASEB Journal
IF0
err2025-10-09
err0
errOAAI
errMoran Morelli; Mariyana V. Savova; Karla Queiroz; Amy C. Harms; Thomas Hankemeier
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errSave
Structure-based prediction of SARS-CoV-2 variant properties using machine learning on mutational neighborhoods
errFrontiers in Bioinformatics
IF3.9
err2025-09-27
err0
errOAAI
errMax van den Boom; Erik Schultes†; Thomas Hankemeier†
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errSave

Research Directions

No research directions
Co-authors
Cooperation Journals
R
Rob Knight
H-index: 255 · Papers: 1.8K
C
Cornelia M. van Duijn
H-index: 238 · Papers: 1.9K
N
Nicholas J. Wareham
H-index: 233 · Papers: 2.2K
D
Dorret I. Boomsma
H-index: 202 · Papers: 2.3K
C
Christian Gieger
H-index: 175 · Papers: 942
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