Not logged in LinkML: an open data modeling framework Moxon, Sierra A. T.; Solbrig, Harold; Harris, Nomi L.; Kalita, Patrick; Miller, Mark A.; Patil, Sujay; Schaper, Kevin; Bizon, Chris; Caufield, J. Harry; Cuesta, Silvano Cirujano; Cox, Corey; Dekervel, Frank; Dooley, Damion M.; Duncan, William D.; Fliss, Tim; Gehrke, Sarah; Graefe, Adam S. L.; Hegde, Harshad; Ireland, A. J.; Jacobsen, Julius O. B.; Krishnamurthy, Madan; Kroll, Carlo; Linke, David; Ly, Ryan; Matentzoglu, Nicolas; Overton, James A.; Saunders, Jonny L.; Unni, Deepak R.; Vaidya, Gaurav; Vierdag, Wouter-Michiel A. M.; Ruebel, Oliver; Chute, Christopher G.; Brush, Matthew H.; Haendel, Melissa A.; Mungall, Christopher J. Share Save
Adaptive immune receptor repertoire knowledge commons: large-scale knowledge for research and innovation (https://airr-knowledgeorg) Christley, Scott; Breden, Felix; Burns, Kevin; Corrie, Brian; Lees, William; Overton, James; Peres, Ayelet; Peters, Bjoern; Richardson, Eve; Roskin, Krishna; Scheffer, Lonneke; Vita, Randi J.; Watson, Corey T.; Yaari, Gur; Cowell, Lindsay G. Share Save
A change language for ontologies and knowledge graphs Hegde, Harshad; Vendetti, Jennifer; Goutte-Gattat, Damien; Caufield, J. Harry; Graybeal, John B.; Harris, Nomi L.; Karam, Naouel; Kindermann, Christian; Matentzoglu, Nicolas; Overton, James A.; Musen, Mark A.; Mungall, Christopher J. Share Save
The Immune Epitope Database (IEDB): 2024 update Vita, Randi; Blazeska, Nina; Marrama, Daniel; Duesing, Sebastian; Bennett, Jason; Greenbaum, Jason; Mendes, Marcus De Almeida; Mahita, Jarjapu; Wheeler, Daniel K.; Cantrell, Jason R.; Overton, James A.; Natale, Darren A.; Sette, Alessandro; Peters, Bjoern Share Save
A systems vaccinology resource to develop and test computational models of immunity Shinde, Pramod; Willemsen, Lisa; Orfield, Shelby; Kojima, Mari; Reyna, Joaquin; Ha, Brendan; Greenbaum, Jason; Overton, James; Nili, Somayeh; Rasmussen, Mikkel; Gygi, Jeremy; Antunes, Ricardo da Silva; Sette, Alessandro; Olsen, Lars Ronn; Grant, Barry; Konstorum, Anna; Guan, Leying Share Save
A multi-omics systems vaccinology resource to develop and test computational models of immunity Shinde, Pramod; Soldevila, Ferran; Reyna, Joaquin; Aoki, Minori; Rasmussen, Mikkel; Willemsen, Lisa; Kojima, Mari; Ha, Brendan; Greenbaum, Jason A.; Overton, James A.; Guzman-Orozco, Hector; Nili, Somayeh; Orfield, Shelby; Gygi, Jeremy P.; Antunes, Ricardo da Silva; Sette, Alessandro; Grant, Barry; Olsen, Lars Ronn; Konstorum, Anna; Guan, Leying; Ay, Ferhat; Kleinstein, Steven H.; Peters, Bjoern Share Save
Multi-omic longitudinal study reveals immune correlates of clinical course among hospitalized COVID-19 patients Diray-Arce, Joann; Fourati, Slim; Jayavelu, Naresh Doni; Patel, Ravi; Maguire, Cole; Chang, Ana C.; Dandekar, Ravi; Qi, Jingjing; Lee, Brian H.; van Zalm, Patrick; Schroeder, Andrew; Chen, Ernie; Konstorum, Anna; Brito, Anderson; Gygi, Jeremy P.; Kho, Alvin; Chen, Jing; Pawar, Shrikant; Gonzalez-Reiche, Ana Silvia; Hoch, Annmarie; Milliren, Carly E.; Overton, James A.; Westendorf, Kerstin; Cairns, Charles B.; Rouphael, Nadine; Bosinger, Steven E.; Kim-Schulze, Seunghee; Krammer, Florian; Rosen, Lindsey; Grubaugh, Nathan D.; van Bakel, Harm; Wilson, Michael; Rajan, Jayant; Steen, Hanno; Eckalbar, Walter; Cotsapas, Chris; Langelier, Charles R.; Levy, Ofer; Altman, Matthew C.; Maecker, Holden; Montgomery, Ruth R.; Haddad, Elias K.; Sekaly, Rafick P.; Esserman, Denise; Ozonoff, Al; Becker, Patrice M.; Augustine, Alison D.; Guan, Leying; Peters, Bjoern; Kleinstein, Steven H. Share Save
Coronavirus Immunotherapeutic Consortium Database Mahita, Jarjapu; Ha, Brendan; Gambiez, Anais; Schendel, Sharon L.; Li, Haoyang; Hastie, Kathryn M.; Dennison, S. Moses; Li, Kan; Kuzmina, Natalia; Periasamy, Sivakumar; Bukreyev, Alexander; Munt, Jennifer E.; Osei-Twum, Mary; Atyeo, Caroline; Overton, James A.; Vita, Randi; Guzman-Orozco, Hector; Mendes, Marcus; Kojima, Mari; Halfmann, Peter J.; Kawaoka, Yoshihiro; Alter, Galit; Gagnon, Luc; Baric, Ralph S.; Tomaras, Georgia D.; Germann, Tim; Bedinger, Daniel; Greenbaum, Jason A.; Saphire, Erica Ollmann; Peters, Bjoern Share Save
Ontology Development Kit: a toolkit for building, maintaining and standardizing biomedical ontologies Matentzoglu, Nicolas; Goutte-Gattat, Damien; Tan, Shawn Zheng Kai; Balhoff, James P.; Carbon, Seth; Caron, Anita R.; Duncan, William D.; Flack, Joe E.; Haendel, Melissa; Harris, Nomi L.; Hogan, William R.; Hoyt, Charles Tapley; Jackson, Rebecca C.; Kim, HyeongSik; Kir, Huseyin; Larralde, Martin; McMurry, Julie A.; Overton, James A.; Peters, Bjoern; Pilgrim, Clare; Stefancsik, Ray; Robb, Sofia M. C.; Toro, Sabrina; Vasilevsky, Nicole A.; Walls, Ramona; Mungall, Christopher J.; Osumi-Sutherland, David Share Save
A Simple Standard for Sharing Ontological Mappings (SSSOM) Matentzoglu, Nicolas; Balhoff, James P.; Bello, Susan M.; Bizon, Chris; Brush, Matthew; Callahan, Tiffany J.; Chute, Christopher G.; Duncan, William D.; Evelo, Chris T.; Gabriel, Davera; Graybeal, John; Gray, Alasdair; Gyori, Benjamin M.; Haendel, Melissa; Harmse, Henriette; Harris, Nomi L.; Harrow, Ian; Hegde, Harshad B.; Hoyt, Amelia L.; Hoyt, Charles T.; Jiao, Dazhi; Jimenez-Ruiz, Ernesto; Jupp, Simon; Kim, Hyeongsik; Koehler, Sebastian; Liener, Thomas; Long, Qinqin; Malone, James; McLaughlin, James A.; McMurry, Julie A.; Moxon, Sierra; Munoz-Torres, Monica C.; Osumi-Sutherland, David; Overton, James A.; Peters, Bjoern; Putman, Tim; Queralt-Rosinach, Nuria; Shefchek, Kent; Solbrig, Harold; Thessen, Anne; Tudorache, Tania; Vasilevsky, Nicole; Wagner, Alex H.; Mungall, Christopher J. Share Save
The Minimal Information about MHC Multimers (MIAMM) Vita, Randi J.; Mody, Apurva; Overton, James A.; Buus, Soren; Haley, Stephen T.; Willis, Richard A.; Sette, Alessandro; Mallajosyula, Vamsee; Peters, Bjoern; Altman, John D. Share Save
Minimal Information about MHC Multimers (MIAMM) Vita, Randi; Mody, Apurva; Overton, James A.; Buus, Soren; Haley, Stephen T.; Sette, Alessandro; Mallajosyula, Vamsee; Davis, Mark M.; Long, Dale L.; Willis, Richard A.; Peters, Bjoern; Altman, John D. Share Save
OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies Jackson, Rebecca; Matentzoglu, Nicolas; Overton, James A.; Vita, Randi; Balhoff, James P.; Buttigieg, Pier Luigi; Carbon, Seth; Courtot, Melanie; Diehl, Alexander D.; Dooley, Damion M.; Duncan, William D.; Harris, Nomi L.; Haendel, Melissa A.; Lewis, Suzanna E.; Natale, Darren A.; Osumi-Sutherland, David; Ruttenberg, Alan; Schriml, Lynn M.; Smith, Barry; Stoeckert, Christian J., Jr.; Vasilevsky, Nicole A.; Walls, Ramona L.; Zheng, Jie; Mungall, Christopher J.; Peters, Bjoern Share Save
Standardization of assay representation in the Ontology for Biomedical Investigations Vita, Randi; Zheng, Jie; Jackson, Rebecca; Dooley, Damion; Overton, James A.; Miller, Mark A.; Berrios, Daniel C.; Scheuermann, Richard H.; He, Yongqun; McGinty, Hande Kucuk; Brochhausen, Mathias; Lin, Aisyah Yu; Jain, Sagar B.; Chibucos, Marcus C.; Judkins, John; Giglio, Michelle G.; Feng, Irene Y.; Burns, Gully; Brush, Matthew H.; Peters, Bjoern; Stoeckert, Christian J., Jr. Share Save
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