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Nishadi De Silva
european molecular biology laboratory (embl)
16H-index
40Paper Count
7.9KCitation Count
Published Papers 15
Publication Date
- Publication Date
- Impact Factor
- Citations
Ensembl 2026
NUCLEIC ACIDS RESEARCH
2025-11-01
3
OAAI
Yates, Andrew D.; Austine-Orimoloye, Olanrewaju; Azov, Andrey G.; Barba, Matthieu; Barnes, If; Barrera-Enriquez, Vianey Paola; Becker, Arne; Bennett, Ruth; Berry, Andrew; Bhai, Jyothish; Bhurji, Simarpreet Kaur; Branco Lins, Paulo R.; Brooks, Lucy; Budhanuru Ramaraju, Shashank; Campbell, Lahcen, I; Carbajo Martinez, Manuel; Carpenter, Jack; Charkhchi, Mehrnaz; Cortes, Lucas A.; Davidson, Claire; Dickson, Suzanna; Dodiya, Kamalkumar; Donaldson, Sarah; El Houdaigui, Bilal; El Naboulsi, Tamara; Fairbrother-Browne, Aine; Falola, Oluwadamilare; Fatima, Reham; Gonzalez Martinez, Jose; Gurbich, Tatiana; Hall, Holly; Hardy, Matthew; Hollis, Zoe; Hunt, Toby; Kay, Mike; Kaikala, Vinay; Lazar, Anna; Lemos, Diana; Lodha, Disha; Mathlouthi, Nourhen; Merino, Gabriela A.; Merritt, Ryan; Mirabueno, Louisse Paola; Mushtaq, Aleena; Nakib Hossain, Syed; Perez-Silva, Jose G.; Pilizota, Ivana; Poppleton, Daniel; Prosovetskaia, Irina; Raj, Shriya; Salam, Ahamed Imran Abdul; Saraf, Shradha; Sinha, Swati; Sipos, Botond; Sitnik, Vasily; Suner, Marie-Marthe; Surapaneni, Likhitha; Tierney, Jack A. S.; Urbina-Gomez, David; Veidenberg, Andres; Walsh, Thomas A.; Allen, Jamie M.; Alvarez-Jarreta, Jorge; Cheema, Jitender; Batista da Rocha, Jorge; De silva, Nishadi H.; Tricomi, Francesca Floriana; Giorgetti, Stefano; Ilsley, Garth R.; Keatley, Jon; Loveland, Jane E.; Mudge, Jonathan M.; Naamati, Guy; Tate, John; Willhoft, Natalie L.; Winterbottom, Andrea; Flint, Bethany R.; Frankish, Adam; Haggerty, Leanne; Hunt, Sarah E.; Clark, Emily L.; Dyer, Sarah C.; Freeberg, Mallory A.; Martin, Fergal J.; Finn, Robert D.
IF13.1
Ensembl 2025
NUCLEIC ACIDS RESEARCH
2024-12-04
1
OAAI
Dyer, Sarah C.; Austine-Orimoloye, Olanrewaju; Azov, Andrey G.; Barba, Matthieu; Barnes, If; Barrera-Enriquez, Vianey Paola; Becker, Arne; Bennett, Ruth; Beracochea, Martin; Berry, Andrew; Bhai, Jyothish; Bhurji, Simarpreet Kaur; Boddu, Sanjay; Lins, Paulo R. Branco; Brooks, Lucy; Ramaraju, Shashank Budhanuru; Campbell, Lahcen, I; Martinez, Manuel Carbajo; Charkhchi, Mehrnaz; Cortes, Lucas A.; Davidson, Claire; Denni, Sukanya; Dodiya, Kamalkumar; Donaldson, Sarah; El Houdaigui, Bilal; El Naboulsi, Tamara; Falola, Oluwadamilare; Fatima, Reham; Genez, Thiago; Martinez, Jose Gonzalez; Gurbich, Tatiana; Hardy, Matthew; Hollis, Zoe; Hunt, Toby; Kay, Mike; Kaykala, Vinay; Lemos, Diana; Lodha, Disha; Mathlouthi, Nourhen; Merino, Gabriela Alejandra; Merritt, Ryan; Mirabueno, Louisse Paola; Mushtaq, Aleena; Hossain, Syed Nakib; Perez-Silva, Jose G.; Perry, Malcolm; Pilizota, Ivana; Poppleton, Daniel; Prosovetskaia, Irina; Raj, Shriya; Salam, Ahamed Imran Abdul; Saraf, Shradha; Saraiva-Agostinho, Nuno; Sinha, Swati; Sipos, Botond; Sitnik, Vasily; Steed, Emily; Suner, Marie-Marthe; Surapaneni, Likhitha; Sutinen, Kyosti; Tricomi, Francesca Floriana; Tsang, Ian; Urbina-Gomez, David; Veidenberg, Andres; Walsh, Thomas A.; Willhoft, Natalie L.; Allen, Jamie; Alvarez-Jarreta, Jorge; Chakiachvili, Marc; Cheema, Jitender; da Rocha, Jorge Batista; De Silva, Nishadi H.; Giorgetti, Stefano; Haggerty, Leanne; Ilsley, Garth R.; Keatley, Jon; Loveland, Jane E.; Moore, Benjamin; Mudge, Jonathan M.; Naamati, Guy; Tate, John; Trevanion, Stephen J.; Winterbottom, Andrea; Flint, Bethany; Frankish, Adam; Hunt, Sarah E.; Finn, Robert D.; Freeberg, Mallory A.; Harrison, Peter W.; Martin, Fergal J.; Yates, Andrew D.
IF13.1
Ensembl 2024
NUCLEIC ACIDS RESEARCH
2023-11-11
83
OAAI
Harrison, Peter W.; Amode, M. Ridwan; Austine-Orimoloye, Olanrewaju; Azov, Andrey G.; Barba, Matthieu; Barnes, If; Becker, Arne; Bennett, Ruth; Berry, Andrew; Bhai, Jyothish; Bhurji, Simarpreet Kaur; Boddu, Sanjay; Lins, Paulo R. Branco; Brooks, Lucy; Ramaraju, Shashank Budhanuru; Campbell, Lahcen, I; Martinez, Manuel Carbajo; Charkhchi, Mehrnaz; Chougule, Kapeel; Cockburn, Alexander; Davidson, Claire; De Silva, Nishadi H.; Dodiya, Kamalkumar; Donaldson, Sarah; El Houdaigui, Bilal; El Naboulsi, Tamara; Fatima, Reham; Giron, Carlos Garcia; Genez, Thiago; Grigoriadis, Dionysios; Ghattaoraya, Gurpreet S.; Martinez, Jose Gonzalez; Gurbich, Tatiana A.; Hardy, Matthew; Hollis, Zoe; Hourlier, Thibaut; Hunt, Toby; Kay, Mike; Kaykala, Vinay; Le, Tuan; Lemos, Diana; Lodha, Disha; Marques-Coelho, Diego; Maslen, Gareth; Merino, Gabriela Alejandra; Mirabueno, Louisse Paola; Mushtaq, Aleena; Hossain, Syed Nakib; Ogeh, Denye N.; Sakthivel, Manoj Pandian; Parker, Anne; Perry, Malcolm; Pilizota, Ivana; Poppleton, Daniel; Prosovetskaia, Irina; Raj, Shriya; Perez-Silva, Jose G.; Salam, Ahamed Imran Abdul; Saraf, Shradha; Saraiva-Agostinho, Nuno; Sheppard, Dan; Sinha, Swati; Sipos, Botond; Sitnik, Vasily; Stark, William; Steed, Emily; Suner, Marie-Marthe; Surapaneni, Likhitha; Sutinen, Kyosti; Tricomi, Francesca Floriana; Urbina-Gomez, David; Veidenberg, Andres; Walsh, Thomas A.; Ware, Doreen; Wass, Elizabeth; Willhoft, Natalie L.; Allen, Jamie; Alvarez-Jarreta, Jorge; Chakiachvili, Marc; Flint, Bethany; Giorgetti, Stefano; Haggerty, Leanne; Ilsley, Garth R.; Keatley, Jon; Loveland, Jane E.; Moore, Benjamin; Mudge, Jonathan M.; Naamati, Guy; Tate, John; Trevanion, Stephen J.; Winterbottom, Andrea; Frankish, Adam; Hunt, Sarah E.; Cunningham, Fiona; Dyer, Sarah; Finn, Robert D.; Martin, Fergal J.; Yates, Andrew D.
IF13.1
Ensembl Genomes 2022: an expanding genome resource for non-vertebrates
NUCLEIC ACIDS RESEARCH
2021-11-13
167
OAAI
Yates, Andrew D.; Allen, James; Amode, Ridwan M.; Azov, Andrey G.; Barba, Matthieu; Becerra, Andres; Bhai, Jyothish; Campbell, Lahcen, I; Martinez, Manuel Carbajo; Chakiachvili, Marc; Chougule, Kapeel; Christensen, Mikkel; Contreras-Moreira, Bruno; Cuzick, Alayne; Fioretto, Luca Da Rin; Davis, Paul; De Silva, Nishadi H.; Diamantakis, Stavros; Dyer, Sarah; Elser, Justin; Filippi, Carla, V; Gall, Astrid; Grigoriadis, Dionysios; Guijarro-Clarke, Cristina; Gupta, Parul; Hammond-Kosack, Kim E.; Howe, Kevin L.; Jaiswal, Pankaj; Kaikala, Vinay; Kumar, Vivek; Kumari, Sunita; Langridge, Nick; Le, Tuan; Luypaert, Manuel; Maslen, Gareth L.; Maurel, Thomas; Moore, Benjamin; Muffato, Matthieu; Mushtaq, Aleena; Naamati, Guy; Naithani, Sushma; Olson, Andrew; Parker, Anne; Paulini, Michael; Pedro, Helder; Perry, Emily; Preece, Justin; Quinton-Tulloch, Mark; Rodgers, Faye; Rosello, Marc; Ruffier, Magali; Seager, James; Sitnik, Vasily; Szpak, Michal; Tate, John; Tello-Ruiz, Marcela K.; Trevanion, Stephen J.; Urban, Martin; Ware, Doreen; Wei, Sharon; Williams, Gary; Winterbottom, Andrea; Zarowiecki, Magdalena; Finn, Robert D.; Flicek, Paul
IF13.1
PHI-base in 2022: a multi-species phenotype database for Pathogen-Host Interactions
NUCLEIC ACIDS RESEARCH
2021-11-12
85
OAAI
Urban, Martin; Cuzick, Alayne; Seager, James; Wood, Valerie; Rutherford, Kim; Venkatesh, Shilpa Yagwakote; Sahu, Jashobanta; Iyer, S. Vijaylakshmi; Khamari, Lokanath; De Silva, Nishadi; Martinez, Manuel Carbajo; Pedro, Helder; Yates, Andrew D.; Hammond-Kosack, Kim E.
IF13.1
The Ensembl COVID-19 resource: ongoing integration of public SARS-CoV-2 data
NUCLEIC ACIDS RESEARCH
2021-10-11
8
OAAI
De Silva, Nishadi H.; Bhai, Jyothish; Chakiachvili, Marc; Contreras-Moreira, Bruno; Cummins, Carla; Frankish, Adam; Gall, Astrid; Genez, Thiago; Howe, Kevin L.; Hunt, Sarah E.; Martin, Fergal J.; Moore, Benjamin; Ogeh, Denye; Parker, Anne; Parton, Andrew; Ruffier, Magali; Sakthivel, Manoj Pandian; Sheppard, Dan; Tate, John; Thormann, Anja; Thybert, David; Trevanion, Stephen J.; Winterbottom, Andrea; Zerbino, Daniel R.; Finn, Robert D.; Flicek, Paul; Yates, Andrew D.
IF13.1
Ensembl 2021
NUCLEIC ACIDS RESEARCH
2020-11-02
1.1K
OAAI
Howe, Kevin L.; Achuthan, Premanand; Allen, James; Allen, Jamie; Alvarez-Jarreta, Jorge; Amode, M. Ridwan; Armean, Irina M.; Azov, Andrey G.; Bennett, Ruth; Bhai, Jyothish; Billis, Konstantinos; Boddu, Sanjay; Charkhchi, Mehrnaz; Cummins, Carla; Fioretto, Luca Rin; Davidson, Claire; Dodiya, Kamalkumar; El Houdaigui, Bilal; Fatima, Reham; Gall, Astrid; Giron, Carlos Garcia; Grego, Tiago; Guijarro-Clarke, Cristina; Haggerty, Leanne; Hemrom, Anmol; Hourlier, Thibaut; Izuogu, Osagie G.; Juettemann, Thomas; Kaikala, Vinay; Kay, Mike; Lavidas, Ilias; Le, Tuan; Lemos, Diana; Martinez, Jose Gonzalez; Marugan, Jose Carlos; Maurel, Thomas; McMahon, Aoife C.; Mohanan, Shamika; Moore, Benjamin; Muffato, Matthieu; Oheh, Denye N.; Paraschas, Dimitrios; Parker, Anne; Parton, Andrew; Prosovetskaia, Irina; Sakthivel, Manoj P.; Salam, Ahamed I. Abdul; Schmitt, Bianca M.; Schuilenburg, Helen; Sheppard, N.; Steed, Emily; Szpak, Michal; Szuba, Marek; Taylor, Kieron; Thormann, Anja; Threadgold, Glen; Walts, Brandon; Winterbottom, Andrea; Chakiachvili, Marc; Chaubal, Ameya; De Silva, Nishadi; Flint, Bethany; Frankish, Adam; Hunt, Sarah E.; IIsley, Garth R.; Langridge, Nick; Loveland, Jane E.; Martin, Fergal J.; Mudge, Jonathan M.; Morales, Joanella; Perry, Emily; Ruffier, Magali; Tate, John; Thybert, David; Trevanion, Stephen J.; Cunningham, Fiona; Yates, Andrew D.; Zerbino, Daniel R.; Flicek, Paul
IF13.1
PHI-base: the pathogen-host interactions database
NUCLEIC ACIDS RESEARCH
2019-11-16
269
OAAI
Urban, Martin; Cuzick, Alayne; Seager, James; Wood, Valerie; Rutherford, Kim; Venkatesh, Shilpa Yagwakote; De Silva, Nishadi; Martinez, Manuel Carbajo; Pedro, Helder; Yates, Andy D.; Hassani-Pak, Keywan; Hammond-Kosack, Kim E.
IF13.1
Collaborative Annotation Redefines Gene Sets for Crucial Phytopathogens
2019-11-07
9
OAAI
Pedro, Helder; Yates, Andrew D.; Kersey, Paul J.; De Silva, Nishadi H.
Ensembl Genomes 2020-enabling non-vertebrate genomic research
NUCLEIC ACIDS RESEARCH
2019-10-10
336
OAAI
Howe, Kevin L.; Contreras-Moreira, Bruno; De Silva, Nishadi; Maslen, Gareth; Akanni, Wasiu; Allen, James; Alvarez-Jarreta, Jorge; Barba, Matthieu; Bolser, Dan M.; Cambell, Lahcen; Carbajo, Manuel; Chakiachvili, Marc; Christensen, Mikkel; Cummins, Carla; Cuzick, Alayne; Davis, Paul; Fexova, Silvie; Gall, Astrid; George, Nancy; Gil, Laurent; Gupta, Parul; Hammond-Kosack, Kim E.; Haskell, Erin; Hunt, Sarah E.; Jaiswal, Pankaj; Janacek, Sophie H.; Kersey, Paul J.; Langridge, Nick; Maheswari, Uma; Maurel, Thomas; McDowall, Mark D.; Moore, Ben; Muffato, Matthieu; Naamati, Guy; Naithani, Sushma; Olson, Andrew; Papatheodorou, Irene; Patricio, Mateus; Paulini, Michael; Pedro, Helder; Perry, Emily; Preece, Justin; Rosello, Marc; Russell, Matthew; Sitnik, Vasily; Staines, Daniel M.; Stein, Joshua; Tello-Ruiz, Marcela K.; Trevanion, Stephen J.; Urban, Martin; Wei, Sharon; Ware, Doreen; Williams, Gary; Yates, Andrew D.; Flicek, Paul
IF13.1
Ensembl Genomes 2018: an integrated omics infrastructure for non-vertebrate species
NUCLEIC ACIDS RESEARCH
2017-10-30
362
OAAI
Kersey, Paul Julian; Allen, James E.; Allot, Alexis; Barba, Matthieu; Boddu, Sanjay; Bolt, Bruce J.; Carvalho-Silva, Denise; Christensen, Mikkel; Davis, Paul; Grabmueller, Christoph; Kumar, Navin; Liu, Zicheng; Maurel, Thomas; Moore, Ben; McDowall, Mark D.; Maheswari, Uma; Naamati, Guy; Newman, Victoria; Ong, Chuang Kee; Paulini, Michael; Pedro, Helder; Perry, Emily; Russell, Matthew; Sparrow, Helen; Tapanari, Electra; Taylor, Kieron; Vullo, Alessandro; Williams, Gareth; Zadissia, Amonida; Olson, Andrew; Stein, Joshua; Wei, Sharon; Tello-Ruiz, Marcela; Ware, Doreen; Luciani, Aurelien; Potter, Simon; Finn, Robert D.; Urban, Martin; Hammond-Kosack, Kim E.; Bolser, Dan M.; De Silva, Nishadi; Howe, Kevin L.; Langridge, Nicholas; Maslen, Gareth; Staines, Daniel Michael; Yates, Andrew
IF13.1
Robust high-throughput prokaryote de novo assembly and improvement pipeline for Illumina data
2016-08-25
185
OAAI
Page, Andrew J.; De Silva, Nishadi; Hunt, Martin; Quail, Michael A.; Parkhill, Julian; Harris, Simon R.; Otto, Thomas D.; Keane, Jacqueline A.
Circlator: automated circularization of genome assemblies using long sequencing reads
GENOME BIOLOGY
2015-12-29
565
OAAI
Hunt, Martin; De Silva, Nishadi; Otto, Thomas D.; Parkhill, Julian; Keane, Jacqueline A.; Harris, Simon R.
IF9.4
A Systematically Improved High Quality Genome and Transcriptome of the Human Blood Fluke Schistosoma mansoni
2012-01-10
371
OAAI
Protasio, Anna V.; Tsai, Isheng J.; Babbage, Anne; Nichol, Sarah; Hunt, Martin; Aslett, Martin A.; De Silva, Nishadi; Velarde, Giles S.; Anderson, Tim J. C.; Clark, Richard C.; Davidson, Claire; Dillon, Gary P.; Holroyd, Nancy E.; LoVerde, Philip T.; Lloyd, Christine; McQuillan, Jacquelline; Oliveira, Guilherme; Otto, Thomas D.; Parker-Manuel, Sophia J.; Quail, Michael A.; Wilson, R. Alan; Zerlotini, Adhemar; Dunne, David W.; Berriman, Matthew
GeneDB-an annotation database for pathogens
NUCLEIC ACIDS RESEARCH
2011-11-23
189
OAAI
Logan-Klumpler, Flora J.; De Silva, Nishadi; Boehme, Ulrike; Rogers, Matthew B.; Velarde, Giles; McQuillan, Jacqueline A.; Carver, Tim; Aslett, Martin; Olsen, Christian; Subramanian, Sandhya; Phan, Isabelle; Farris, Carol; Mitra, Siddhartha; Ramasamy, Gowthaman; Wang, Haiming; Tivey, Adrian; Jackson, Andrew; Houston, Robin; Parkhill, Julian; Holden, Matthew; Harb, Omar S.; Brunk, Brian P.; Myler, Peter J.; Roos, David; Carrington, Mark; Smith, Deborah F.; Hertz-Fowler, Christiane; Berriman, Matthew
IF13.1
Research Directions
No research directions

