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SaveGenome sequences of four Ixodes species expands understanding of tick evolution
de Araujo, Alexandra Cerqueira; Noel, Benjamin; Bretaudeau, Anthony; Labadie, Karine; Boudet, Mateo; Tadrent, Nachida; Istace, Benjamin; Kritli, Salima; Cruaud, Corinne; Olaso, Robert; Deleuze, Jean-Francois; Voordouw, Maarten J.; Hervet, Caroline; Plantard, Olivier; Zamoto-Niikura, Aya; Chertemps, Thomas; Maibeche, Martine; Hilliou, Frederique; Le Goff, Gaelle; Chmelar, Jindrich; Mazak, Vilem; Jmel, Mohamed Amine; Kotsyfakis, Michalis; Medina, Jose Maria; Hackenberg, Michael; Simo, Ladislav; Koutroumpa, Fotini A.; Wincker, Patrick; Kopacek, Petr; Perner, Jan; Aury, Jean-Marc; Rispe, Claude Share Save Identification of a viral gene essential for the genome replication of a domesticated endogenous virus in ichneumonid parasitoid waspsLorenzi, Ange; Legeai, Fabrice; Jouan, Veronique; Girard, Pierre-Alain; Strand, Michael R.; Ravallec, Marc; Eychenne, Magali; Bretaudeau, Anthony; Robin, Stephanie; Rochefort, Jeanne; Villegas, Mathilde; Burke, Gaelen R.; Rebollo, Rita; Negre, Nicolas; Volkoff, Anne-Nathalie Share Save Training Infrastructure as a ServiceRasche, Helena; Hyde, Cameron; Davis, John; Gladman, Simon; Coraor, Nate; Bretaudeau, Anthony; Cuccuru, Gianmauro; Bacon, Wendi; Serrano-Solano, Beatriz; Hillman-Jackson, Jennifer; Hiltemann, Saskia; Zhou, Miaomiao; Gruening, Bjoern; Stubbs, Andrew Share Save First chromosome scale genomes of ithomiine butterflies (Nymphalidae: Ithomiini): Comparative models for mimicry genetic studiesGauthier, Jeremy; Meier, Joana; Legeai, Fabrice; McClure, Melanie; Whibley, Annabel; Bretaudeau, Anthony; Boulain, Helene; Parrinello, Hugues; Mugford, Sam T. T.; Durbin, Richard; Zhou, Chenxi; McCarthy, Shane; Wheat, Christopher W. W.; Piron-Prunier, Florence; Monsempes, Christelle; Francois, Marie-Christine; Jay, Paul; Nous, Camille; Persyn, Emma; Jacquin-Joly, Emmanuelle; Meslin, Camille; Montagne, Nicolas; Lemaitre, Claire; Elias, Marianne Share Save The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 updateOstrovsky, Alexander E.; Mahmoud, Alexandru; Lonie, Andrew J.; Syme, Anna; Fouilloux, Anne; Bretaudeau, Anthony; Nekrutenko, Anton; Kumar, Anup; Eschenlauer, Arthur C.; DeSanto, Assunta D.; Guerler, Aysam; Serrano-Solano, Beatriz; Batut, Berenice; Gruening, Bjoern A.; Langhorst, Bradley W.; Carr, Bridget; Raubenolt, Bryan A.; Hyde, Cameron J.; Bromhead, Catherine J.; Barnett, Christopher B.; Royaux, Coline; Gallardo, Cristobal; Blankenberg, Daniel; Fornika, Daniel J.; Baker, Dannon; Bouvier, Dave; Clements, Dave; Morais, David A. de Lima; Tabernero, David Lopez; Lariviere, Delphine; Nasr, Engy; Afgan, Enis; Zambelli, Federico; Heyl, Florian; Psomopoulos, Fotis; Coppens, Frederik; Price, Gareth R.; Cuccuru, Gianmauro; Le Corguille, Gildas; Von Kuster, Greg; Akbulut, Gulsum Gudukbay; Rasche, Helena; Hans-Rudolf, Hotz; Eguinoa, Ignacio; Makunin, Igor; Ranawaka, Isuru J.; Taylor, James P.; Joshi, Jayadev; Hillman-Jackson, Jennifer; Goecks, Jeremy; Chilton, John M.; Kamali, Kaivan; Suderman, Keith; Poterlowicz, Krzysztof; Yvan, Le Bras; Lopez-Delisle, Lucille; Sargent, Luke; Bassetti, Madeline E.; Tangaro, Marco Antonio; van den Beek, Marius; Cech, Martin; Bernt, Matthias; Fahrner, Matthias; Tekman, Mehmet; Foell, Melanie C.; Schatz, Michael C.; Crusoe, Michael R.; Roncoroni, Miguel; Kucher, Natalie; Coraor, Nate; Stoler, Nicholas; Rhodes, Nick; Soranzo, Nicola; Pinter, Niko; Goonasekera, Nuwan A.; Moreno, Pablo A.; Videm, Pavankumar; Melanie, Petera; Mandreoli, Pietro; Jagtap, Pratik D.; Gu, Qiang; Weber, Ralf J. M.; Lazarus, Ross; Vorderman, Ruben H. P.; Hiltemann, Saskia; Golitsynskiy, Sergey; Garg, Shilpa; Bray, Simon A.; Gladman, Simon L.; Leo, Simone; Mehta, Subina P.; Griffin, Timothy J.; Jalili, Vahid; Yves, Vandenbrouck; Wen, Victor; Nagampalli, Vijay K.; Bacon, Wendi A.; de Koning, Willem; Maier, Wolfgang; Briggs, Peter J. Share Save Chromosomal scale assembly of parasitic wasp genome reveals symbiotic virus colonization (Jul, 10.1038/s42003-020-01623-8, 2021)Gauthier, Jeremy; Boulain, Helene; van Vugt, Joke J. F. A.; Baudry, Lyam; Persyn, Emma; Aury, Jean-Marc; Noel, Benjamin; Bretaudeau, Anthony; Legeai, Fabrice; Warris, Sven; Chebbi, Mohamed A.; Dubreuil, Geraldine; Duvic, Bernard; Kremer, Natacha; Gayral, Philippe; Musset, Karine; Josse, Thibaut; Bigot, Diane; Bressac, Christophe; Moreau, Sebastien; Periquet, Georges; Harry, Myriam; Montagne, Nicolas; Boulogne, Isabelle; Sabeti-Azad, Mahnaz; Maibeche, Martine; Chertemps, Thomas; Hilliou, Frederique; Siaussat, David; Amselem, Joelle; Luyten, Isabelle; Capdevielle-Dulac, Claire; Labadie, Karine; Merlin, Bruna Lais; Barbe, Valerie; de Boer, Jetske G.; Marbouty, Martial; Consoli, Fernando Luis; Dupas, Stephane; Hua-Van, Aurelie; Le Goff, Gaelle; Bezier, Annie; Jacquin-Joly, Emmanuelle; Whitfield, James B.; Vet, Louise E. M.; Smid, Hans M.; Kaiser, Laure; Koszul, Romain; Huguet, Elisabeth; Herniou, Elisabeth A.; Drezen, Jean-Michel Share Save Chromosomal scale assembly of parasitic wasp genome reveals symbiotic virus colonizationGauthier, Jeremy; Boulain, Helene; van Vugt, Joke J. F. A.; Baudry, Lyam; Persyn, Emma; Aury, Jean-Marc; Noel, Benjamin; Bretaudeau, Anthony; Legeai, Fabrice; Warris, Sven; Chebbi, Mohamed A.; Dubreuil, Geraldine; Duvic, Bernard; Kremer, Natacha; Gayral, Philippe; Musset, Karine; Josse, Thibaut; Bigot, Diane; Bressac, Christophe; Moreau, Sebastien; Periquet, Georges; Harry, Myriam; Montagne, Nicolas; Boulogne, Isabelle; Sabeti-Azad, Mahnaz; Maibeche, Martine; Chertemps, Thomas; Hilliou, Frederique; Siaussat, David; Amselem, Joelle; Luyten, Isabelle; Capdevielle-Dulac, Claire; Labadie, Karine; Merlin, Bruna Lais; Barbe, Valerie; de Boer, Jetske G.; Marbouty, Martial; Consoli, Fernando Luis; Dupas, Stephane; Hua-Van, Aurelie; Le Goff, Gaelle; Bezier, Annie; Jacquin-Joly, Emmanuelle; Whitfield, James B.; Vet, Louise E. M.; Smid, Hans M.; Kaiser, Laure; Koszul, Romain; Huguet, Elisabeth; Herniou, Elisabeth A.; Drezen, Jean-Michel Share Save Share Save Adaptation by copy number variation increases insecticide resistance in the fall armywormGimenez, Sylvie; Abdelgaffar, Heba; Goff, Gaelle Le; Hilliou, Frederique; Blanco, Carlos A.; Haenniger, Sabine; Bretaudeau, Anthony; Legeai, Fabrice; Negre, Nicolas; Jurat-Fuentes, Juan Luis; d'Alencon, Emmanuelle; Nam, Kiwoong Share Save Functional insights from the GC-poor genomes of two aphid parasitoids, Aphidius ervi and Lysiphlebus fabarumDennis, Alice B.; Ballesteros, Gabriel, I; Robin, Stephanie; Schrader, Lukas; Bast, Jens; Berghoefer, Jan; Beukeboom, Leo W.; Belghazi, Maya; Bretaudeau, Anthony; Buellesbach, Jan; Cash, Elizabeth; Colinet, Dominique; Dumas, Zoe; Errbii, Mohammed; Falabella, Patrizia; Gatti, Jean-Luc; Geuverink, Elzemiek; Gibson, Joshua D.; Hertaeg, Corinne; Hartmann, Stefanie; Jacquin-Joly, Emmanuelle; Lammers, Mark; Lavandero, Blas, I; Lindenbaum, Ina; Massardier-Galata, Lauriane; Meslin, Camille; Montagne, Nicolas; Pairie, Nina; Poirie, Marylene; Salvia, Rosanna; Smith, Chris R.; Tagu, Denis; Tares, Sophie; Vogel, Heiko; Schwander, Tanja; Simon, Jean-Christophe; Figueroa, Christian C.; Vorburger, Christoph; Legeai, Fabrice; Gadau, Juergen Share Save Soybean aphid biotype 1 genome: Insights into the invasive biology and adaptive evolution of a major agricultural pestGiordano, Rosanna; Donthu, Ravi Kiran; Zimin, Aleksey, V; Julca Chavez, Irene Consuelo; Gabaldon, Toni; van Munster, Manuella; Hon, Lawrence; Hall, Richard; Badger, Jonathan H.; Minh Nguyen; Flores, Alejandra; Potter, Bruce; Giray, Tugrul; Soto-Adames, Felipe N.; Weber, Everett; Marcelino, Jose A. P.; Fields, Christopher J.; Voegtlin, David J.; Hill, Curt B.; Hartman, Glen L.; Akraiko, Tatsiana; Aschwanden, Andrew; Avalos, Arian; Band, Mark; Bonning, Bryony; Bretaudeau, Anthony; Chiesa, Olga; Chirumamilla, Anitha; Coates, Brad S.; Cocuzza, Giuseppe; Cullen, Eileen; Desborough, Peter; Diers, Brian; DiFonzo, Christina; Heimpel, George E.; Herman, Theresa; Huang, Yongping; Knodel, Janet; Ko, Chiun-Cheng; Labrie, Genevieve; Lagos-Kutz, Doris; Lee, Joon-Ho; Lee, Seunghwan; Legeai, Fabrice; Mandrioli, Mauro; Manicardi, Gian Carlo; Mazzoni, Emanuele; Melchiori, Giulia; Micijevic, Ana; Miller, Nick; Nasuddin, Andi; Nault, Brian A.; O'Neal, Matthew E.; Panini, Michela; Pessino, Massimo; Prischmann-Voldseth, Deirdre; Robertson, Hugh M.; Liu, Sijun; Song, Hojun; Tilmon, Kelley; Tooker, John; Wu, Kongming; Zhan, Shuai Share Save Tripal v3: an ontology-based toolkit for construction of FAIR biological community databasesSpoor, Shawna; Cheng, Chen-Huai; Sanderson, Lacey-Anne; Condon, Bradford; Almsaeed, Abdullah; Chen, Ming; Bretaudeau, Anthony; Rasche, Helena; Jung, Sook; Main, Dorrie; Bett, Kirstin; Staton, Margaret; Wegrzyn, Jill L.; Feltus, F. Alex; Ficklin, Stephen P. Share Save Community-Driven Data Analysis Training for BiologyBatut, Berenice; Hiltemann, Saskia; Bagnacani, Andrea; Baker, Dannon; Bhardwaj, Vivek; Blank, Clemens; Bretaudeau, Anthony; Brillet-Gueguen, Loraine; Cech, Martin; Chilton, John; Clements, Dave; Doppelt-Azeroual, Olivia; Erxleben, Anika; Freeberg, Mallory Ann; Gladman, Simon; Hoogstrate, Youri; Hotz, Hans-Rudolf; Houwaart, Torsten; Jagtap, Pratik; Lariviere, Delphine; Le Corguille, Gildas; Manke, Thomas; Mareuil, Fabien; Ramirez, Fidel; Ryan, Devon; Sigloch, Florian Christoph; Soranzo, Nicola; Wolff, Joachim; Videm, Pavankumar; Wolfien, Markus; Wubuli, Aisanjiang; Yusuf, Dilmurat; Taylor, James; Backofen, Rolf; Nekrutenko, Anton; Gruening, Bjoern Share Save Draft genome and reference transcriptomic resources for the urticating pine defoliator Thaumetopoea pityocampa (Lepidoptera: Notodontidae)Gschloessl, B.; Dorkeld, F.; Berges, H.; Beydon, G.; Bouchez, O.; Branco, M.; Bretaudeau, A.; Burban, C.; Dubois, E.; Gauthier, P.; Lhuillier, E.; Nichols, J.; Nidelet, S.; Rocha, S.; Saune, L.; Streiff, R.; Gautier, M.; Kerdelhue, C. Share Save Two genomes of highly polyphagous lepidopteran pests (Spodoptera frugiperda, Noctuidae) with different host-plant rangesGouin, Anais; Bretaudeau, Anthony; Nam, Kiwoong; Gimenez, Sylvie; Aury, Jean-Marc; Duvic, Bernard; Hilliou, Frederique; Durand, Nicolas; Montagne, Nicolas; Darboux, Isabelle; Kuwar, Suyog; Chertemps, Thomas; Siaussat, David; Bretschneider, Anne; Mone, Yves; Ahn, Seung-Joon; Haenniger, Sabine; Grenet, Anne-Sophie Gosselin; Neunemann, David; Maumus, Florian; Luyten, Isabelle; Labadie, Karine; Xu, Wei; Koutroumpa, Fotini; Escoubas, Jean-Michel; Llopis, Angel; Maibeche-Coisne, Martine; Salasc, Fanny; Tomar, Archana; Anderson, Alisha R.; Khan, Sher Afzal; Dumas, Pascaline; Orsucci, Marion; Guy, Julie; Belser, Caroline; Alberti, Adriana; Noel, Benjamin; Couloux, Arnaud; Mercier, Jonathan; Nidelet, Sabine; Dubois, Emeric; Liu, Nai-Yong; Boulogne, Isabelle; Mirabeau, Olivier; Le Goff, Gaelle; Gordon, Karl; Oakeshott, John; Consoli, Fernando L.; Volkoff, Anne-Nathalie; Fescemyer, Howard W.; Marden, James H.; Luthe, Dawn S.; Herrero, Salvador; Heckel, David G.; Wincker, Patrick; Kergoat, Gael J.; Amselem, Joelle; Quesneville, Hadi; Groot, Astrid T.; Jacquin-Joly, Emmanuelle; Negre, Nicolas; Lemaitre, Claire; Legeai, Fabrice; d'Alencon, Emmanuelle; Fournier, Philippe Share Save Share Save Rapid transcriptional plasticity of duplicated gene clusters enables a clonally reproducing aphid to colonise diverse plant species (vol 18, 27, 2017)Mathers, Thomas C.; Chen, Yazhou; Kaithakottil, Gemy; Legeai, Fabrice; Mugford, Sam T.; Baa-Puyoulet, Patrice; Bretaudeau, Anthony; Clavijo, Bernardo; Colella, Stefano; Collin, Olivier; Dalmay, Tamas; Derrien, Thomas; Feng, Honglin; Gabaldon, Toni; Jordan, Anna; Julca, Irene; Kettles, Graeme J.; Kowitwanich, Krissana; Lavenier, Dominique; Lenzi, Paolo; Lopez-Gomollon, Sara; Loska, Damian; Mapleson, Daniel; Maumus, Florian; Moxon, Simon; Price, Daniel R. G.; Sugio, Akiko; van Munster, Manuella; Uzest, Marilyne; Waite, Darren; Jander, Georg; Tagu, Denis; Wilson, Alex C. C.; van Oosterhout, Cock; Swarbreck, David; Hogenhout, Saskia A. Share Save Rapid transcriptional plasticity of duplicated gene clusters enables a clonally reproducing aphid to colonise diverse plant speciesMathers, Thomas C.; Chen, Yazhou; Kaithakottil, Gemy; Legeai, Fabrice; Mugford, Sam T.; Baa-Puyoulet, Patrice; Bretaudeau, Anthony; Clavijo, Bernardo; Colella, Stefano; Collin, Olivier; Dalmay, Tamas; Derrien, Thomas; Feng, Honglin; Gabaldon, Toni; Jordan, Anna; Julca, Irene; Kettles, Graeme J.; Kowitwanich, Krissana; Lavenier, Dominique; Lenzi, Paolo; Lopez-Gomollon, Sara; Loska, Damian; Mapleson, Daniel; Maumus, Florian; Moxon, Simon; Price, Daniel R. G.; Sugio, Akiko; van Munster, Manuella; Uzest, Marilyne; Waite, Darren; Jander, Georg; Tagu, Denis; Wilson, Alex C. C.; van Oosterhout, Cock; Swarbreck, David; Hogenhout, Saskia A. Share Save Share Save 
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