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刘士勇 (Shiyong Liu)

physics

24H-index
147Paper Count
1.9KCitation Count
Published Papers 31
Publication Date
PRIME-BSPre: a genome-wide protein-RNA binding sites prediction method based on templates
err2026-02-21
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errOAAI
errXinhang Wei; Yingtian Duan; Danyang Li; Xudong Liu; Juan Xie; Shiyong Liu
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Complete genome assembly and functional characterization of Brucella melitensis strain IMHB1 from a clinical isolate in Inner Mongolia; China
err2025-12-09
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errOAAI
errXu Zheng†; Chen Liang†; Liping Shao; Chenfang Liu; Ruiyuan Yao; Li Peng; Yanyu Liang; Xiuwen Liang; Shiyong Liu
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Sodium-doped La2Ti2O7 synthesized by molten salt synthesis method for photocatalytic overall water splitting
err2025-02-01
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PREAI
errZhong, Lijiao; Li, Xing; Zhan, Yiquan; Liu, Yongsheng; Yang, Kai; Liu, Jinbiao; Liu, Shiyong; Jiang, Junzhe; Li, Liqing; Sakata, Yoshihisa
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Challenges in structural modeling of RNA-protein interactions
err2023-08-01
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PREAI
errLiu, Xudong; Duan, Yingtian; Hong, Xu; Xie, Juan; Liu, Shiyong
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An updated dataset and a structure-based prediction model for protein-RNA binding affinity
err2023-04-26
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PREAI
errHong, Xu; Tong, Xiaoxue; Xie, Juan; Liu, Pinyu; Liu, Xudong; Song, Qi; Liu, Sen; Liu, Shiyong
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Loss-of-function variants in TIAM1 are associated with developmental delay, intellectual disability, and seizures
err2022-04-01
err21
errOAAI
errLu, Shenzhao; Hernan, Rebecca; Marcogliese, Paul C.; Huang, Yan; Gertler, Tracy S.; Akcaboy, Meltem; Liu, Shiyong; Chung, Hyung-lok; Pan, Xueyang; Sun, Xiaoqin; Oguz, Melahat Melek; Oztoprak, Ulkuhan; de Baaij, Jeroen H. F.; Ivanisevic, Jelena; McGinnis, Erin; Sacoto, Maria J. Guillen; Chung, Wendy K.; Bellen, Hugo J.
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Two novel RNA-binding proteins identification through computational prediction and experimental validation
err2022-01-01
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errOAAI
errXie, Juan; Zhang, Xiaoli; Zheng, Jinfang; Hong, Xu; Tong, Xiaoxue; Liu, Xudong; Xue, Yaqiang; Wang, Xuelian; Zhang, Yi; Liu, Shiyong
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RR3DD: an RNA global structure-based RNA three-dimensional structural classification database
err2021-10-18
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errOAAI
errHong, Xu; Zheng, Jinfang; Xie, Juan; Tong, Xiaoxue; Liu, Xudong; Song, Qi; Liu, Sen; Liu, Shiyong
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A novel antiviral lncRNA, EDAL, shields a T309O-GlcNAcylation site to promote EZH2 lysosomal degradation
err2020-09-01
err41
errOAAI
errSui, Baokun; Chen, Dong; Liu, Wei; Wu, Qiong; Tian, Bin; Li, Yingying; Hou, Jing; Liu, Shiyong; Xie, Juan; Jiang, Hao; Luo, Zhaochen; Lv, Lei; Huang, Fei; Li, Ruiming; Zhang, Chengguang; Tian, Yuling; Cui, Min; Zhou, Ming; Chen, Huanchun; Fu, Zhen F.; Zhang, Yi; Zhao, Ling
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PRIME-3D2D is a 3D2D model to predict binding sites of protein-RNA interaction
err2020-07-16
err10
errOAAI
errXie, Juan; Zheng, Jinfang; Hong, Xu; Tong, Xiaoxue; Liu, Shiyong
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RMalign: an RNA structural alignment tool based on a novel scoring function RMscore
err2019-04-08
err22
errOAAI
errZheng, Jinfang; Xie, Juan; Hong, Xu; Liu, Shiyong
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Deep-RBPPred: Predicting RNA binding proteins in the proteome scale based on deep learning
err2018-10-15
err43
errOAAI
errZheng, Jinfang; Zhang, Xiaoli; Zhao, Xunyi; Tong, Xiaoxue; Hong, Xu; Xie, Juan; Liu, Shiyong
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Fast Extended One-Versus-Rest Multi-Label Support Vector Machine Using Approximate Extreme Points
err2017-01-01
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errOAAI
errSun, Zhongwei; Guo, Zhongwen; Liu, Chao; Wang, Xupeng; Liu, Jing; Liu, Shiyong
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Community-wide evaluation of methods for predicting the effect of mutations on protein-protein interactions
err2013-08-23
err96
errOAAI
errMoretti, Rocco; Fleishman, Sarel J.; Agius, Rudi; Torchala, Mieczyslaw; Bates, Paul A.; Kastritis, Panagiotis L.; Rodrigues, Joao P. G. L. M.; Trellet, Mikael; Bonvin, Alexandre M. J. J.; Cui, Meng; Rooman, Marianne; Gillis, Dimitri; Dehouck, Yves; Moal, Iain; Romero-Durana, Miguel; Perez-Cano, Laura; Pallara, Chiara; Jimenez, Brian; Fernandez-Recio, Juan; Flores, Samuel; Pacella, Michael; Kilambi, Krishna Praneeth; Gray, Jeffrey J.; Popov, Petr; Grudinin, Sergei; Esquivel-Rodriguez, Juan; Kihara, Daisuke; Zhao, Nan; Korkin, Dmitry; Zhu, Xiaolei; Demerdash, Omar N. A.; Mitchell, Julie C.; Kanamori, Eiji; Tsuchiya, Yuko; Nakamura, Haruki; Lee, Hasup; Park, Hahnbeom; Seok, Chaok; Sarmiento, Jamica; Liang, Shide; Teraguchi, Shusuke; Standley, Daron M.; Shimoyama, Hiromitsu; Terashi, Genki; Takeda-Shitaka, Mayuko; Iwadate, Mitsuo; Umeyama, Hideaki; Beglov, Dmitri; Hall, David R.; Kozakov, Dima; Vajda, Sandor; Pierce, Brian G.; Hwang, Howook; Vreven, Thom; Weng, Zhiping; Huang, Yangyu; Li, Haotian; Yang, Xiufeng; Ji, Xiaofeng; Liu, Shiyong; Xiao, Yi; Zacharias, Martin; Qin, Sanbo; Zhou, Huan-Xiang; Huang, Sheng-You; Zou, Xiaoqin; Velankar, Sameer; Janin, Joel; Wodak, Shoshana J.; Baker, David
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A novel protocol for three-dimensional structure prediction of RNA-protein complexes
err2013-05-28
err90
errOAAI
errHuang, Yangyu; Liu, Shiyong; Guo, Dachuan; Li, Lin; Xiao, Yi
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Novel EDA p.Ile260Ser Mutation Linked to Non-syndromic Hypodontia
err2013-04-26
err22
PREAI
errYang, Y.; Luo, L.; Xu, J.; Zhu, P.; Xue, W.; Wang, J.; Li, W.; Wang, M.; Cheng, K.; Liu, S.; Tang, Z.; Ring, B. Z.; Su, L.
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Protein-RNA Interaction Interface Prediction and Design
err2012-01-01
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errOAAI
errHuang Yang-Yu; Yang Xiu-Feng; Li Hao-Tian; Ji Xiao-Feng; Cheng Hong-Li; Zhao Yun-Jie; Guo Da-Chuan; Li Lin; Liu Shi-Yong
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