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Molecular determinants for recognition of serotonylated chromatin Pulido-Cortes, Laura; Gielingh, Hajo; Thijssen, Vito; Liu, Minglong; Yoshisada, Ryoji; Soares, Leonardo Romao; Nizamuddin, Sheikh; Friedrich, Florian; Greschik, Holger; Peng, Ling; Honorato, Rodrigo Vargas; Jung, Manfred; Bonvin, Alexandre M. J. J.; Biniossek, Martin L.; Schuele, Roland; Jongkees, Seino; van Ingen, Hugo; Timmers, H. Th Marc Share Save
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Toward the Prediction of Binding Events in Very Flexible, Allosteric, Multidomain Proteins Basciu, Andrea; Athar, Mohd; Kurt, Han; Neville, Christine; Malloci, Giuliano; Muredda, Fabrizio C.; Bosin, Andrea; Ruggerone, Paolo; Bonvin, Alexandre M. J. J.; Vargiu, Attilio V. Share Save
Integrative Modeling in the Age of Machine Learning: A Summary of HADDOCK Strategies in CAPRI Rounds 47-55 Reys, Victor; Giulini, Marco; Cojocaru, Vlad; Engel, Anna; Xu, Xiaotong; Roel-Touris, Jorge; Geng, Cunliang; Ambrosetti, Francesco; Jimenez-Garcia, Brian; Jandova, Zuzana; Koukos, Panagiotis I.; van Noort, Charlotte; Teixeira, Joao M. C.; van Keulen, Siri C.; Reau, Manon; Honorato, Rodrigo V.; Bonvin, Alexandre M. J. J. Share Save
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The HADDOCK2.4 web server for integrative modeling of biomolecular complexes Honorato, Rodrigo V.; Trellet, Mikael E.; Jimenez-Garcia, Brian; Schaarschmidt, Joerg J.; Giulini, Marco; Reys, Victor; Koukos, Panagiotis I.; Rodrigues, Joao P. G. L. M.; Karaca, Ezgi; van Zundert, Gydo C. P.; Roel-Touris, Jorge; van Noort, Charlotte W.; Jandova, Zuzana; Melquiond, Adrien S. J.; Bonvin, Alexandre M. J. J. Share Save
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Impact of AlphaFold on structure prediction of protein complexes: The CASP15-CAPRI experiment Lensink, Marc F.; Brysbaert, Guillaume; Raouraoua, Nessim; Bates, Paul A.; Giulini, Marco; Honorato, Rodrigo V.; van Noort, Charlotte; Teixeira, Joao M. C.; Bonvin, Alexandre M. J. J.; Kong, Ren; Shi, Hang; Lu, Xufeng; Chang, Shan; Liu, Jian; Guo, Zhiye; Chen, Xiao; Morehead, Alex; Roy, Raj S.; Wu, Tianqi; Giri, Nabin; Quadir, Farhan; Chen, Chen; Cheng, Jianlin; Del Carpio, Carlos A.; Ichiishi, Eichiro; Rodriguez-Lumbreras, Luis A.; Fernandez-Recio, Juan; Harmalkar, Ameya; Chu, Lee-Shin; Canner, Sam; Smanta, Rituparna; Gray, Jeffrey J.; Li, Hao; Lin, Peicong; He, Jiahua; Tao, Huanyu; Huang, Sheng-You; Roel-Touris, Jorge; Jimenez-Garcia, Brian; Christoffer, Charles W.; Jain, Anika J.; Kagaya, Yuki; Kannan, Harini; Nakamura, Tsukasa; Terashi, Genki; Verburgt, Jacob C.; Zhang, Yuanyuan; Zhang, Zicong; Fujuta, Hayato; Sekijima, Masakazu; Kihara, Daisuke; Khan, Omeir; Kotelnikov, Sergei; Ghani, Usman; Padhorny, Dzmitry; Beglov, Dmitri; Vajda, Sandor; Kozakov, Dima; Negi, Surendra S.; Ricciardelli, Tiziana; Barradas-Bautista, Didier; Cao, Zhen; Chawla, Mohit; Cavallo, Luigi; Oliva, Romina; Yin, Rui; Cheung, Melyssa; Guest, Johnathan D.; Lee, Jessica; Pierce, Brian G.; Shor, Ben; Cohen, Tomer; Halfon, Matan; Schneidman-Duhovny, Dina; Zhu, Shaowen; Yin, Rujie; Sun, Yuanfei; Shen, Yang; Maszota-Zieleniak, Martyna; Bojarski, Krzysztof K.; Lubecka, Emilia A.; Marcisz, Mateusz; Danielsson, Annemarie; Dziadek, Lukasz; Gaardlos, Margrethe; Gieldon, Artur; Liwo, Adam; Samsonov, Sergey A.; Slusarz, Rafal; Zieba, Karolina; Sieradzan, Adam K.; Czaplewski, Cezary; Kobayashi, Shinpei; Miyakawa, Yuta; Kiyota, Yasuomi; Takeda-Shitaka, Mayuko; Olechnovic, Kliment; Valancauskas, Lukas; Dapkunas, Justas; Venclovas, Ceslovas; Wallner, Bjorn; Yang, Lin; Hou, Chengyu; He, Xiaodong; Guo, Shuai; Jiang, Shenda; Ma, Xiaoliang; Duan, Rui; Qui, Liming; Xu, Xianjin; Zou, Xiaoqin; Velankar, Sameer; Wodak, Shoshana J. Share Save
A novel antifolate suppresses growth of FPGS-deficient van der Krift, Felix; Zijlmans, Dick W.; Shukla, Rhythm; Javed, Ali; Koukos, Panagiotis, I; Schwarz, Laura L. E.; Timmermans-Sprang, Elpetra P. M.; Maas, Peter E. M.; Gahtory, Digvijay; van den Nieuwboer, Maurits; Mol, Jan A.; Strous, Ger J.; Bonvin, Alexandre M. J. J.; van der Stelt, Mario; Veldhuizen, Edwin J. A.; Weingarth, Markus; Vermeulen, Michiel; Klumperman, Judith; Maurice, Madelon M. Share Save
Discriminating physiological from non-physiological interfaces in structures of protein complexes: A community-wide study Schweke, Hugo; Xu, Qifang; Tauriello, Gerardo; Pantolini, Lorenzo; Schwede, Torsten; Cazals, Frederic; Lheritier, Alix; Fernandez-Recio, Juan; Rodriguez-Lumbreras, Luis Angel; Schueler-Furman, Ora; Varga, Julia. K. K.; Jimenez-Garcia, Brian; Reau, Manon F.; Bonvin, Alexandre M. J. J.; Savojardo, Castrense; Martelli, Pier-Luigi; Casadio, Rita; Tubiana, Jerome; Wolfson, Haim. J. J.; Oliva, Romina; Barradas-Bautista, Didier; Ricciardelli, Tiziana; Cavallo, Luigi; Venclovas, Ceslovas; Olechnovic, Kliment; Guerois, Raphael; Andreani, Jessica; Martin, Juliette; Wang, Xiao; Terashi, Genki; Sarkar, Daipayan; Christoffer, Charles; Aderinwale, Tunde; Verburgt, Jacob; Kihara, Daisuke; Marchand, Anthony; Correia, Bruno E.; Duan, Rui; Qiu, Liming; Xu, Xianjin; Zhang, Shuang; Zou, Xiaoqin; Dey, Sucharita; Dunbrack, Roland L.; Levy, Emmanuel D.; Wodak, Shoshana J. Share Save
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Short-Chain Fatty Acids Stimulate Angiopoietin-Like 4 Synthesis in Human Colon Adenocarcinoma Cells by Activating Peroxisome Proliferator-Activated Receptor γ Alex, Sheril; Lange, Katja; Amolo, Tom; Grinstead, Jeffrey S.; Haakonsson, Anders K.; Szalowska, Ewa; Koppen, Arjen; Mudde, Karin; Haenen, Danielle; Al-Lahham, Sa'ad; Roelofsen, Han; Houtman, Rene; van der Burg, Bart; Mandrup, Susanne; Bonvin, Alexandre M. J. J.; Kalkhoven, Eric; Muller, Michael; Hooiveld, Guido J.; Kersten, Sander Share Save
PPARγ lipodystrophy mutants reveal intermolecular interactions required for enhancer activation Madsen, Maria Stahl; Broekema, Marjoleine F.; Madsen, Martin Ronn; Koppen, Arjen; Borgman, Anouska; Grawe, Cathrin; Thomsen, Elisabeth G. K.; Westland, Denise; Kranendonk, Mariette E. G.; Koerkamp, Marian Groot; Hamers, Nicole; Bonvin, Alexandre M. J. J.; Pittol, Jose M. Ramos; Natarajan, Kedar Nath; Kersten, Sander; Holstege, Frank C. P.; Monajemi, Houshang; van Mil, Saskia W. C.; Vermeulen, Michiel; Kragelund, Birthe B.; Cassiman, David; Mandrup, Susanne; Kalkhoven, Eric Share Save
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