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Iakes Ezkurdia

centro nacional de investigaciones cardiovasculares (cnic)

28H-index
46Paper Count
1.4WCitation Count
Published Papers 24
Publication Date
SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification (vol 28, pg 396, 2018)
err2018-07-02
err17
errOAAI
errTardaguila, Manuel; de la Fuente, Lorena; Marti, Cristina; Pereira, Cecile; Pardo-Palacios, Francisco Jose; del Risco, Hector; Ferrell, Marc; Mellado, Maravillas; Macchietto, Marissa; Verheggen, Kenneth; Edelmann, Mariola; Ezkurdia, Iakes; Vazquez, Jesus; Tress, Michael; Mortazavi, Ali; Martens, Lennart; Rodriguez-Navarro, Susana; Moreno-Manzano, Victoria; Conesa, Ana
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Comprehensive Quantification of the Modified Proteome Reveals Oxidative Heart Damage in Mitochondrial Heteroplasmy
err2018-06-01
err35
errOAAI
errBagwan, Navratan; Bonzon-Kulichenko, Elena; Calvo, Enrique; Victoria Lechuga-Vieco, Ana; Michalakopoulos, Spiros; Trevisan-Herraz, Marco; Ezkurdia, Iakes; Manuel Rodriguez, Jose; Magni, Ricardo; Latorre-Pellicer, Ana; Antonio Enriquez, Jose; Vazquez, Jesus
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SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification
err2018-02-09
err284
errOAAI
errTardaguila, Manuel; de la Fuente, Lorena; Marti, Cristina; Pereira, Cecile; Jose Pardo-Palacios, Francisco; del Risco, Hector; Ferrell, Marc; Mellado, Maravillas; Macchietto, Marissa; Verheggen, Kenneth; Edelmann, Mariola; Ezkurdia, Iakes; Vazquez, Jesus; Tress, Michael; Mortazavi, Ali; Martens, Lennart; Rodriguez-Navarro, Susana; Moreno-Manzano, Victoria; Conesa, Ana
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Quantitative HDL Proteomics Identifies Peroxiredoxin-6 as a Biomarker of Human Abdominal Aortic Aneurysm
err2016-12-09
err35
errOAAI
errBurillo, Elena; Jorge, Inmaculada; Martinez-Lopez, Diego; Camafeita, Emilio; Miguel Blanco-Colio, Luis; Trevisan-Herraz, Marco; Ezkurdia, Iakes; Egido, Jesus; Michel, Jean-Baptiste; Meilhac, Olivier; Vazquez, Jesus; Luis Martin-Ventura, Jose
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A novel high-content analysis tool reveals Rab8-driven cytoskeletal reorganization through Rho GTPases, calpain and MT1-MMP
err2016-04-15
err23
errOAAI
errBravo-Cordero, Jose J.; Cordani, Marco; Soriano, Silvia F.; Diez, Begona; Munoz-Agudo, Carmen; Casanova-Acebes, Maria; Boullosa, Cesar; Guadamillas, Marta C.; Ezkurdia, Iakes; Gonzalez-Pisano, David; del Pozo, Miguel A.; Montoya, Maria C.
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The potential clinical impact of the release of two drafts of the human proteome
err2015-10-23
err23
errOAAI
errEzkurdia, Iakes; Calvo, Enrique; Del Pozo, Angela; Vazquez, Jesus; Valencia, Alfonso; Tress, Michael L.
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Most Highly Expressed Protein-Coding Genes Have a Single Dominant Isoform
err2015-03-11
err91
errOAAI
errEzkurdia, Iakes; Manuel Rodriguez, Jose; Carrillo-de Santa Pau, Enrique; Vazquez, Jesus; Valencia, Alfonso; Tress, Michael L.
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Analyzing the First Drafts of the Human Proteome (vol 13, pg 3854, 2014)
err2015-03-10
err2
errOAAI
errEzkurdia, Iakes; Vazquez, Jesus; Valencia, Alfonso; Tress, Michael
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Analyzing the First Drafts of the Human Proteome
err2014-07-16
err87
errOAAI
errEzkurdia, Iakes; Vazquez, Jesus; Valencia, Alfonso; Tress, Michael
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Multiple evidence strands suggest that there may be as few as 19 000 human protein-coding genes
err2014-06-16
err423
errOAAI
errEzkurdia, Iakes; Juan, David; Manuel Rodriguez, Jose; Frankish, Adam; Diekhans, Mark; Harrow, Jennifer; Vazquez, Jesus; Valencia, Alfonso; Tress, Michael L.
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APPRIS: annotation of principal and alternative splice isoforms
err2012-11-17
err175
errOAAI
errManuel Rodriguez, Jose; Maietta, Paolo; Ezkurdia, Iakes; Pietrelli, Alessandro; Wesselink, Jan-Jaap; Lopez, Gonzalo; Valencia, Alfonso; Tress, Michael L.
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GENCODE: The reference human genome annotation for The ENCODE Project
err2012-09-05
err3.9K
errOAAI
errHarrow, Jennifer; Frankish, Adam; Gonzalez, Jose M.; Tapanari, Electra; Diekhans, Mark; Kokocinski, Felix; Aken, Bronwen L.; Barrell, Daniel; Zadissa, Amonida; Searle, Stephen; Barnes, If; Bignell, Alexandra; Boychenko, Veronika; Hunt, Toby; Kay, Mike; Mukherjee, Gaurab; Rajan, Jeena; Despacio-Reyes, Gloria; Saunders, Gary; Steward, Charles; Harte, Rachel; Lin, Michael; Howald, Cedric; Tanzer, Andrea; Derrien, Thomas; Chrast, Jacqueline; Walters, Nathalie; Balasubramanian, Suganthi; Pei, Baikang; Tress, Michael; Manuel Rodriguez, Jose; Ezkurdia, Iakes; van Baren, Jeltje; Brent, Michael; Haussler, David; Kellis, Manolis; Valencia, Alfonso; Reymond, Alexandre; Gerstein, Mark; Guigo, Roderic; Hubbard, Tim J.
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Chimeras taking shape: Potential functions of proteins encoded by chimeric RNA transcripts
err2012-05-15
err115
errOAAI
errFrenkel-Morgenstern, Milana; Lacroix, Vincent; Ezkurdia, Iakes; Levin, Yishai; Gabashvili, Alexandra; Prilusky, Jaime; del Pozo, Angela; Tress, Michael; Johnson, Rory; Guigo, Roderic; Valencia, Alfonso
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Comparative Proteomics Reveals a Significant Bias Toward Alternative Protein Isoforms with Conserved Structure and Function
err2012-03-22
err67
errOAAI
errEzkurdia, Iakes; del Pozo, Angela; Frankish, Adam; Manuel Rodriguez, Jose; Harrow, Jennifer; Ashman, Keith; Valencia, Alfonso; Tress, Michael L.
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From identification to validation to gene count
err2010-10-11
err1
errOAAI
errAmid, Clara; Frankish, Adam; Havana; Aken, Bronwen; Ezkurdia, Iakes; Kokocinsk, Felix; Gilbert, James; White, Simon; Carninci, Piero; Gingeras, Thomas; Guigo, Roderic; Searle, Steve; Tress, Michael L.; Harrow, Jennifer; Hubbard, Tim
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Assessment of domain boundary predictions and the prediction of intramolecular contacts in CASP8
err2009-10-22
err64
PREAI
errEzkurdia, Iakes; Grana, Osvaldo; Izarzugaza, Jose M. G.; Tress, Michael L.
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Target domain definition and classification in CASP8
err2009-10-22
err38
errOAAI
errTress, Michael L.; Ezkurdia, Iakes; Richardson, Jane S.
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Assessment of ligand binding residue predictions in CASP8
err2009-10-22
err27
errOAAI
errLopez, Gonzalo; Ezkurdia, Iakes; Tress, Michael L.
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EcID. A database for the inference of functional interactions in E. coli
err2009-01-01
err20
errOAAI
errAndres Leon, Eduardo; Ezkurdia, Iakes; Garcia, Beatriz; Valencia, Alfonso; Juan, David
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Progress and challenges in predicting protein-protein interaction sites
err2008-12-06
err152
PREAI
errEzkurdia, Lakes; Bartoli, Lisa; Fariselli, Piero; Casadio, Rita; Valencia, Alfonso; Tress, Michael L.
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